RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 SLC52A1Q9NWF4 448 aa21.03■□□□□ 0.96
TMEM55A-205ENST00000520709 STAG3Q9UJ98 1225 aa21.03■□□□□ 0.96
TMEM55A-205ENST00000520709 TMEM94Q12767 1356 aa21.01■□□□□ 0.95
TMEM55A-205ENST00000520709 ROCK1Q13464 1354 aa21.01■□□□□ 0.95
TMEM55A-205ENST00000520709 FAM135BQ49AJ0 1406 aa21.01■□□□□ 0.95
TMEM55A-205ENST00000520709 KCNA6P17658 529 aa21■□□□□ 0.95
TMEM55A-205ENST00000520709 PLEKHG1Q9ULL1 1385 aa20.98■□□□□ 0.95
TMEM55A-205ENST00000520709 DIP2AQ14689 1571 aa20.97■□□□□ 0.95
TMEM55A-205ENST00000520709 RIMS2Q9UQ26 1411 aa20.97■□□□□ 0.95
TMEM55A-205ENST00000520709 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
TMEM55A-205ENST00000520709 SPHKAPQ2M3C7 1700 aa20.96■□□□□ 0.95
TMEM55A-205ENST00000520709 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
TMEM55A-205ENST00000520709 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
TMEM55A-205ENST00000520709 ADAMTS13Q76LX8 1427 aa20.92■□□□□ 0.94
TMEM55A-205ENST00000520709 NRXN3Q9Y4C0 1643 aa20.91■□□□□ 0.94
TMEM55A-205ENST00000520709 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
TMEM55A-205ENST00000520709 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.9■□□□□ 0.94
TMEM55A-205ENST00000520709 PROSER2Q86WR7 435 aaPredicted RBP20.89■□□□□ 0.93
TMEM55A-205ENST00000520709 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.93
TMEM55A-205ENST00000520709 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
TMEM55A-205ENST00000520709 MSH6P52701 1360 aa20.87■□□□□ 0.93
TMEM55A-205ENST00000520709 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
TMEM55A-205ENST00000520709 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
TMEM55A-205ENST00000520709 TRPM2O94759 1503 aa20.86■□□□□ 0.93
TMEM55A-205ENST00000520709 RGS17Q9UGC6 210 aaPredicted RBP20.85■□□□□ 0.93
TMEM55A-205ENST00000520709 SETBP1Q9Y6X0 1596 aa20.85■□□□□ 0.93
TMEM55A-205ENST00000520709 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
TMEM55A-205ENST00000520709 PIK3R4Q99570 1358 aa20.84■□□□□ 0.93
TMEM55A-205ENST00000520709 NUP155O75694 1391 aa20.83■□□□□ 0.92
TMEM55A-205ENST00000520709 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
TMEM55A-205ENST00000520709 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.82■□□□□ 0.92
TMEM55A-205ENST00000520709 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
TMEM55A-205ENST00000520709 AHDC1Q5TGY3 1603 aaPredicted RBP20.82■□□□□ 0.92
TMEM55A-205ENST00000520709 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
TMEM55A-205ENST00000520709 SHPRHQ149N8 1683 aa20.8■□□□□ 0.92
TMEM55A-205ENST00000520709 BCANQ96GW7 911 aa20.8■□□□□ 0.92
TMEM55A-205ENST00000520709 KIF1BO60333 1816 aa20.8■□□□□ 0.92
TMEM55A-205ENST00000520709 PTPRUQ92729 1446 aa20.79■□□□□ 0.92
TMEM55A-205ENST00000520709 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
TMEM55A-205ENST00000520709 RRBP1Q9P2E9 1410 aaKnown RBP20.78■□□□□ 0.92
TMEM55A-205ENST00000520709 CHGAP10645 457 aaKnown RBP20.77■□□□□ 0.92
TMEM55A-205ENST00000520709 SLAIN2Q9P270 581 aa20.77■□□□□ 0.92
TMEM55A-205ENST00000520709 SETD1AO15047 1707 aaKnown RBP20.76■□□□□ 0.91
TMEM55A-205ENST00000520709 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
TMEM55A-205ENST00000520709 NHSL1Q5SYE7 1610 aa20.74■□□□□ 0.91
TMEM55A-205ENST00000520709 JCADQ9P266 1359 aa20.73■□□□□ 0.91
TMEM55A-205ENST00000520709 NALCNQ8IZF0 1738 aa20.73■□□□□ 0.91
TMEM55A-205ENST00000520709 DCCP43146 1447 aa20.73■□□□□ 0.91
TMEM55A-205ENST00000520709 ITGAEP38570 1179 aa20.72■□□□□ 0.91
TMEM55A-205ENST00000520709 LRP6O75581 1613 aa20.71■□□□□ 0.91
TMEM55A-205ENST00000520709 NAIPQ13075 1403 aa20.71■□□□□ 0.91
TMEM55A-205ENST00000520709 POTEAQ6S8J7 498 aa20.7■□□□□ 0.9
TMEM55A-205ENST00000520709 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
TMEM55A-205ENST00000520709 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
TMEM55A-205ENST00000520709 PPLO60437 1756 aa20.67■□□□□ 0.9
TMEM55A-205ENST00000520709 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
TMEM55A-205ENST00000520709 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
TMEM55A-205ENST00000520709 AMOTL2Q9Y2J4 779 aa20.66■□□□□ 0.9
TMEM55A-205ENST00000520709 MST1RQ04912 1400 aa20.65■□□□□ 0.9
TMEM55A-205ENST00000520709 METP08581 1390 aa20.64■□□□□ 0.89
TMEM55A-205ENST00000520709 LAMC1P11047 1609 aa20.64■□□□□ 0.89
TMEM55A-205ENST00000520709 HFM1A2PYH4 1435 aa20.63■□□□□ 0.89
TMEM55A-205ENST00000520709 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
TMEM55A-205ENST00000520709 ADGRL3Q9HAR2 1447 aa20.62■□□□□ 0.89
TMEM55A-205ENST00000520709 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
TMEM55A-205ENST00000520709 PRAG1Q86YV5 1406 aa20.61■□□□□ 0.89
TMEM55A-205ENST00000520709 ATF3P18847 181 aa20.61■□□□□ 0.89
TMEM55A-205ENST00000520709 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
TMEM55A-205ENST00000520709 IFT172Q9UG01 1749 aa20.59■□□□□ 0.89
TMEM55A-205ENST00000520709 PTCH1Q13635 1447 aa20.59■□□□□ 0.89
TMEM55A-205ENST00000520709 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
TMEM55A-205ENST00000520709 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
TMEM55A-205ENST00000520709 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
TMEM55A-205ENST00000520709 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
TMEM55A-205ENST00000520709 ROBO2Q9HCK4 1378 aa20.48■□□□□ 0.87
TMEM55A-205ENST00000520709 CDC42BPGQ6DT37 1551 aa20.48■□□□□ 0.87
TMEM55A-205ENST00000520709 COL22A1Q8NFW1 1626 aaPredicted RBP20.47■□□□□ 0.87
TMEM55A-205ENST00000520709 CDK12Q9NYV4 1490 aaPredicted RBP20.47■□□□□ 0.87
TMEM55A-205ENST00000520709 PNPLA6Q8IY17 1366 aa20.46■□□□□ 0.87
TMEM55A-205ENST00000520709 MEX3CQ5U5Q3 659 aaKnown RBP20.46■□□□□ 0.87
TMEM55A-205ENST00000520709 ZNF772Q68DY9 489 aaPredicted RBP20.46■□□□□ 0.87
TMEM55A-205ENST00000520709 RPGRIP1LQ68CZ1 1315 aa20.46■□□□□ 0.87
TMEM55A-205ENST00000520709 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
TMEM55A-205ENST00000520709 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
TMEM55A-205ENST00000520709 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
TMEM55A-205ENST00000520709 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
TMEM55A-205ENST00000520709 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
TMEM55A-205ENST00000520709 DDX17Q92841 729 aaKnown RBP20.42■□□□□ 0.86
TMEM55A-205ENST00000520709 LRRC59Q96AG4 307 aaKnown RBP20.41■□□□□ 0.86
TMEM55A-205ENST00000520709 TECPR2O15040 1411 aa20.4■□□□□ 0.86
TMEM55A-205ENST00000520709 AFF2P51816 1311 aa20.39■□□□□ 0.85
TMEM55A-205ENST00000520709 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
TMEM55A-205ENST00000520709 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
TMEM55A-205ENST00000520709 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
TMEM55A-205ENST00000520709 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.85
TMEM55A-205ENST00000520709 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
TMEM55A-205ENST00000520709 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
TMEM55A-205ENST00000520709 RGS12O14924 1447 aa20.36■□□□□ 0.85
TMEM55A-205ENST00000520709 FOXD1Q16676 465 aa20.35■□□□□ 0.85
TMEM55A-205ENST00000520709 PXDNQ92626 1479 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms