RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
IGHV3-42-201ENST00000520410 MYO5BQ9ULV0 1848 aa24.43■■□□□ 1.5
IGHV3-42-201ENST00000520410 NUTM2DQ5VT03 806 aaPredicted RBP24.43■■□□□ 1.5
IGHV3-42-201ENST00000520410 RRBP1Q9P2E9 1410 aaKnown RBP24.43■■□□□ 1.5
IGHV3-42-201ENST00000520410 TMEM131LA2VDJ0 1609 aa24.4■■□□□ 1.5
IGHV3-42-201ENST00000520410 PROSER2Q86WR7 435 aaPredicted RBP24.4■■□□□ 1.5
IGHV3-42-201ENST00000520410 RBM33Q96EV2 1170 aaKnown RBP24.39■■□□□ 1.49
IGHV3-42-201ENST00000520410 KCNA6P17658 529 aa24.38■■□□□ 1.49
IGHV3-42-201ENST00000520410 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.38■■□□□ 1.49
IGHV3-42-201ENST00000520410 TMEM94Q12767 1356 aa24.37■■□□□ 1.49
IGHV3-42-201ENST00000520410 ZFYVE9O95405 1425 aa24.36■■□□□ 1.49
IGHV3-42-201ENST00000520410 ALKQ9UM73 1620 aa24.36■■□□□ 1.49
IGHV3-42-201ENST00000520410 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
IGHV3-42-201ENST00000520410 PLEKHG1Q9ULL1 1385 aa24.36■■□□□ 1.49
IGHV3-42-201ENST00000520410 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
IGHV3-42-201ENST00000520410 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
IGHV3-42-201ENST00000520410 XIRP1Q702N8 1843 aaKnown RBP24.32■■□□□ 1.48
IGHV3-42-201ENST00000520410 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
IGHV3-42-201ENST00000520410 NAIPQ13075 1403 aa24.31■■□□□ 1.48
IGHV3-42-201ENST00000520410 C14orf37Q86TY3 774 aa24.31■■□□□ 1.48
IGHV3-42-201ENST00000520410 NKTRP30414 1462 aaKnown RBP24.31■■□□□ 1.48
IGHV3-42-201ENST00000520410 NWD1Q149M9 1564 aa24.29■■□□□ 1.48
IGHV3-42-201ENST00000520410 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
IGHV3-42-201ENST00000520410 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
IGHV3-42-201ENST00000520410 MSH6P52701 1360 aa24.28■■□□□ 1.48
IGHV3-42-201ENST00000520410 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
IGHV3-42-201ENST00000520410 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
IGHV3-42-201ENST00000520410 DIP2AQ14689 1571 aa24.22■■□□□ 1.47
IGHV3-42-201ENST00000520410 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
IGHV3-42-201ENST00000520410 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
IGHV3-42-201ENST00000520410 TRPM2O94759 1503 aa24.2■■□□□ 1.47
IGHV3-42-201ENST00000520410 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
IGHV3-42-201ENST00000520410 CHD2O14647 1828 aaKnown RBP24.2■■□□□ 1.46
IGHV3-42-201ENST00000520410 ROBO1Q9Y6N7 1651 aa24.18■■□□□ 1.46
IGHV3-42-201ENST00000520410 SOCS7O14512 581 aa24.16■■□□□ 1.46
IGHV3-42-201ENST00000520410 FAM135BQ49AJ0 1406 aa24.16■■□□□ 1.46
IGHV3-42-201ENST00000520410 AMOTL2Q9Y2J4 779 aa24.15■■□□□ 1.46
IGHV3-42-201ENST00000520410 KIF1BO60333 1816 aa24.14■■□□□ 1.46
IGHV3-42-201ENST00000520410 PIK3R4Q99570 1358 aa24.14■■□□□ 1.45
IGHV3-42-201ENST00000520410 ATF3P18847 181 aa24.12■■□□□ 1.45
IGHV3-42-201ENST00000520410 SLAIN2Q9P270 581 aa24.12■■□□□ 1.45
IGHV3-42-201ENST00000520410 FOXD1Q16676 465 aa24.1■■□□□ 1.45
IGHV3-42-201ENST00000520410 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
IGHV3-42-201ENST00000520410 SETBP1Q9Y6X0 1596 aa24.09■■□□□ 1.45
IGHV3-42-201ENST00000520410 PTPRUQ92729 1446 aa24.09■■□□□ 1.45
IGHV3-42-201ENST00000520410 NRXN3Q9Y4C0 1643 aa24.08■■□□□ 1.45
IGHV3-42-201ENST00000520410 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
IGHV3-42-201ENST00000520410 NCOA3Q9Y6Q9 1424 aa24.06■■□□□ 1.44
IGHV3-42-201ENST00000520410 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
IGHV3-42-201ENST00000520410 C19orf44Q9H6X5 657 aa24.05■■□□□ 1.44
IGHV3-42-201ENST00000520410 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.04■■□□□ 1.44
IGHV3-42-201ENST00000520410 METP08581 1390 aa24.03■■□□□ 1.44
IGHV3-42-201ENST00000520410 VGFO15240 615 aaPredicted RBP24.03■■□□□ 1.44
IGHV3-42-201ENST00000520410 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
IGHV3-42-201ENST00000520410 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
IGHV3-42-201ENST00000520410 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
IGHV3-42-201ENST00000520410 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
IGHV3-42-201ENST00000520410 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
IGHV3-42-201ENST00000520410 JCADQ9P266 1359 aa23.95■■□□□ 1.42
IGHV3-42-201ENST00000520410 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
IGHV3-42-201ENST00000520410 PPLO60437 1756 aa23.93■■□□□ 1.42
IGHV3-42-201ENST00000520410 DCCP43146 1447 aa23.93■■□□□ 1.42
IGHV3-42-201ENST00000520410 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
IGHV3-42-201ENST00000520410 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
IGHV3-42-201ENST00000520410 BRINP3Q76B58 766 aa23.91■■□□□ 1.42
IGHV3-42-201ENST00000520410 ADGRL3Q9HAR2 1447 aa23.91■■□□□ 1.42
IGHV3-42-201ENST00000520410 NALCNQ8IZF0 1738 aa23.89■■□□□ 1.41
IGHV3-42-201ENST00000520410 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
IGHV3-42-201ENST00000520410 MST1RQ04912 1400 aa23.87■■□□□ 1.41
IGHV3-42-201ENST00000520410 ASXL1Q8IXJ9 1541 aa23.87■■□□□ 1.41
IGHV3-42-201ENST00000520410 ACIN1Q9UKV3 1341 aaKnown RBP23.86■■□□□ 1.41
IGHV3-42-201ENST00000520410 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
IGHV3-42-201ENST00000520410 ADGRF5Q8IZF2 1346 aa23.85■■□□□ 1.41
IGHV3-42-201ENST00000520410 PTCH1Q13635 1447 aa23.85■■□□□ 1.41
IGHV3-42-201ENST00000520410 SETD1AO15047 1707 aaKnown RBP23.85■■□□□ 1.41
IGHV3-42-201ENST00000520410 STK26Q9P289 416 aa23.85■■□□□ 1.41
IGHV3-42-201ENST00000520410 RGS17Q9UGC6 210 aaPredicted RBP23.85■■□□□ 1.41
IGHV3-42-201ENST00000520410 ROBO2Q9HCK4 1378 aa23.85■■□□□ 1.41
IGHV3-42-201ENST00000520410 NUTM2BA6NNL0 878 aaPredicted RBP23.84■■□□□ 1.41
IGHV3-42-201ENST00000520410 NUTM2EB1AL46 878 aaPredicted RBP23.84■■□□□ 1.41
IGHV3-42-201ENST00000520410 NUTM2AQ8IVF1 878 aaPredicted RBP23.84■■□□□ 1.41
IGHV3-42-201ENST00000520410 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
IGHV3-42-201ENST00000520410 SPATA31A6Q5VVP1 1343 aa23.82■■□□□ 1.4
IGHV3-42-201ENST00000520410 DDX17Q92841 729 aaKnown RBP23.81■■□□□ 1.4
IGHV3-42-201ENST00000520410 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
IGHV3-42-201ENST00000520410 POTEAQ6S8J7 498 aa23.79■■□□□ 1.4
IGHV3-42-201ENST00000520410 SHPRHQ149N8 1683 aa23.78■■□□□ 1.4
IGHV3-42-201ENST00000520410 IFT172Q9UG01 1749 aa23.78■■□□□ 1.4
IGHV3-42-201ENST00000520410 LRP6O75581 1613 aa23.77■■□□□ 1.4
IGHV3-42-201ENST00000520410 C1orf167Q5SNV9 1468 aa23.77■■□□□ 1.4
IGHV3-42-201ENST00000520410 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
IGHV3-42-201ENST00000520410 NHSL1Q5SYE7 1610 aa23.76■■□□□ 1.39
IGHV3-42-201ENST00000520410 LRRC59Q96AG4 307 aaKnown RBP23.75■■□□□ 1.39
IGHV3-42-201ENST00000520410 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
IGHV3-42-201ENST00000520410 NUTM2FA1L443 756 aa23.72■■□□□ 1.39
IGHV3-42-201ENST00000520410 PIK3C2GO75747 1445 aa23.72■■□□□ 1.39
IGHV3-42-201ENST00000520410 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
IGHV3-42-201ENST00000520410 PRAG1Q86YV5 1406 aa23.7■■□□□ 1.38
IGHV3-42-201ENST00000520410 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
IGHV3-42-201ENST00000520410 ESCO1Q5FWF5 840 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms