RNA–Protein interactions for RNA: ENST00000520278.1

TSPAN18-206, Transcript of tetraspanin 18, humanhuman

TSL 4

Gene TSPAN18, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-206ENST00000520278 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
TSPAN18-206ENST00000520278 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
TSPAN18-206ENST00000520278 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
TSPAN18-206ENST00000520278 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.36
TSPAN18-206ENST00000520278 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
TSPAN18-206ENST00000520278 IFT172Q9UG01 1749 aa17.25■□□□□ 0.35
TSPAN18-206ENST00000520278 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
TSPAN18-206ENST00000520278 TXNDC2Q86VQ3 553 aa17.24■□□□□ 0.35
TSPAN18-206ENST00000520278 PPLO60437 1756 aa17.24■□□□□ 0.35
TSPAN18-206ENST00000520278 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
TSPAN18-206ENST00000520278 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
TSPAN18-206ENST00000520278 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
TSPAN18-206ENST00000520278 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
TSPAN18-206ENST00000520278 DCAF11Q8TEB1 546 aa17.22■□□□□ 0.35
TSPAN18-206ENST00000520278 NRXN1Q9ULB1 1477 aa17.22■□□□□ 0.35
TSPAN18-206ENST00000520278 STRCQ7RTU9 1775 aa17.22■□□□□ 0.35
TSPAN18-206ENST00000520278 MED14O60244 1454 aa17.21■□□□□ 0.35
TSPAN18-206ENST00000520278 MYOM2P54296 1465 aa17.21■□□□□ 0.35
TSPAN18-206ENST00000520278 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
TSPAN18-206ENST00000520278 EID1Q9Y6B2 187 aa17.2■□□□□ 0.34
TSPAN18-206ENST00000520278 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
TSPAN18-206ENST00000520278 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
TSPAN18-206ENST00000520278 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
TSPAN18-206ENST00000520278 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
TSPAN18-206ENST00000520278 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
TSPAN18-206ENST00000520278 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
TSPAN18-206ENST00000520278 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
TSPAN18-206ENST00000520278 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
TSPAN18-206ENST00000520278 POLR1AO95602 1720 aaPredicted RBP17.17■□□□□ 0.34
TSPAN18-206ENST00000520278 ADAMTS13Q76LX8 1427 aa17.17■□□□□ 0.34
TSPAN18-206ENST00000520278 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
TSPAN18-206ENST00000520278 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
TSPAN18-206ENST00000520278 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
TSPAN18-206ENST00000520278 STAC3Q96MF2 364 aa17.16■□□□□ 0.34
TSPAN18-206ENST00000520278 SETBP1Q9Y6X0 1596 aa17.15■□□□□ 0.34
TSPAN18-206ENST00000520278 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
TSPAN18-206ENST00000520278 MYT1Q01538 1121 aa17.14■□□□□ 0.33
TSPAN18-206ENST00000520278 IQGAP1P46940 1657 aa17.13■□□□□ 0.33
TSPAN18-206ENST00000520278 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
TSPAN18-206ENST00000520278 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
TSPAN18-206ENST00000520278 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
TSPAN18-206ENST00000520278 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
TSPAN18-206ENST00000520278 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
TSPAN18-206ENST00000520278 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
TSPAN18-206ENST00000520278 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
TSPAN18-206ENST00000520278 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
TSPAN18-206ENST00000520278 METP08581 1390 aa17.09■□□□□ 0.33
TSPAN18-206ENST00000520278 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
TSPAN18-206ENST00000520278 BCANQ96GW7 911 aa17.07■□□□□ 0.32
TSPAN18-206ENST00000520278 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
TSPAN18-206ENST00000520278 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
TSPAN18-206ENST00000520278 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
TSPAN18-206ENST00000520278 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
TSPAN18-206ENST00000520278 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
TSPAN18-206ENST00000520278 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
TSPAN18-206ENST00000520278 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
TSPAN18-206ENST00000520278 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
TSPAN18-206ENST00000520278 LAMC1P11047 1609 aa17.03■□□□□ 0.32
TSPAN18-206ENST00000520278 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
TSPAN18-206ENST00000520278 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
TSPAN18-206ENST00000520278 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
TSPAN18-206ENST00000520278 LRPPRCP42704 1394 aaKnown RBP17■□□□□ 0.31
TSPAN18-206ENST00000520278 YTHDC2Q9H6S0 1430 aaKnown RBP16.99■□□□□ 0.31
TSPAN18-206ENST00000520278 KCNA6P17658 529 aa16.99■□□□□ 0.31
TSPAN18-206ENST00000520278 AMOTL2Q9Y2J4 779 aa16.99■□□□□ 0.31
TSPAN18-206ENST00000520278 STRCP1A6NGW2 1772 aa16.99■□□□□ 0.31
TSPAN18-206ENST00000520278 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
TSPAN18-206ENST00000520278 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
TSPAN18-206ENST00000520278 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
TSPAN18-206ENST00000520278 ABCC11Q96J66 1382 aa16.98■□□□□ 0.31
TSPAN18-206ENST00000520278 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
TSPAN18-206ENST00000520278 TECPR2O15040 1411 aa16.96■□□□□ 0.31
TSPAN18-206ENST00000520278 STK26Q9P289 416 aa16.96■□□□□ 0.31
TSPAN18-206ENST00000520278 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
TSPAN18-206ENST00000520278 LTBP4Q8N2S1 1624 aa16.95■□□□□ 0.3
TSPAN18-206ENST00000520278 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
TSPAN18-206ENST00000520278 CPS1P31327 1500 aa16.93■□□□□ 0.3
TSPAN18-206ENST00000520278 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
TSPAN18-206ENST00000520278 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
TSPAN18-206ENST00000520278 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
TSPAN18-206ENST00000520278 KNDC1Q76NI1 1749 aa16.93■□□□□ 0.3
TSPAN18-206ENST00000520278 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
TSPAN18-206ENST00000520278 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
TSPAN18-206ENST00000520278 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
TSPAN18-206ENST00000520278 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
TSPAN18-206ENST00000520278 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
TSPAN18-206ENST00000520278 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
TSPAN18-206ENST00000520278 RBM33Q96EV2 1170 aaKnown RBP16.9■□□□□ 0.3
TSPAN18-206ENST00000520278 LRRC7Q96NW7 1537 aa16.9■□□□□ 0.3
TSPAN18-206ENST00000520278 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
TSPAN18-206ENST00000520278 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
TSPAN18-206ENST00000520278 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
TSPAN18-206ENST00000520278 TMEM94Q12767 1356 aa16.87■□□□□ 0.29
TSPAN18-206ENST00000520278 USP47Q96K76 1375 aa16.86■□□□□ 0.29
TSPAN18-206ENST00000520278 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
TSPAN18-206ENST00000520278 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
TSPAN18-206ENST00000520278 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
TSPAN18-206ENST00000520278 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
TSPAN18-206ENST00000520278 TESK2Q96S53 571 aa16.83■□□□□ 0.28
TSPAN18-206ENST00000520278 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms