RNA–Protein interactions for RNA: ENST00000520274.1

TTC1-203, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 3

Gene TTC1, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-203ENST00000520274 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
TTC1-203ENST00000520274 NEUROD2Q15784 382 aa12□□□□□ -0.49
TTC1-203ENST00000520274 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
TTC1-203ENST00000520274 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
TTC1-203ENST00000520274 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
TTC1-203ENST00000520274 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
TTC1-203ENST00000520274 MS4A1P11836 297 aa11.97□□□□□ -0.49
TTC1-203ENST00000520274 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
TTC1-203ENST00000520274 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
TTC1-203ENST00000520274 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
TTC1-203ENST00000520274 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
TTC1-203ENST00000520274 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
TTC1-203ENST00000520274 WNT2BQ93097 391 aa11.95□□□□□ -0.5
TTC1-203ENST00000520274 SLC10A3P09131 477 aa11.94□□□□□ -0.5
TTC1-203ENST00000520274 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
TTC1-203ENST00000520274 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.94□□□□□ -0.5
TTC1-203ENST00000520274 CD46P15529 392 aa11.93□□□□□ -0.5
TTC1-203ENST00000520274 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
TTC1-203ENST00000520274 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
TTC1-203ENST00000520274 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
TTC1-203ENST00000520274 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
TTC1-203ENST00000520274 DDX11L8A8MPP1 907 aa11.91□□□□□ -0.5
TTC1-203ENST00000520274 BCAMP50895 628 aa11.91□□□□□ -0.5
TTC1-203ENST00000520274 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
TTC1-203ENST00000520274 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
TTC1-203ENST00000520274 FAM117AQ9C073 453 aa11.89□□□□□ -0.51
TTC1-203ENST00000520274 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
TTC1-203ENST00000520274 BEGAINQ9BUH8 593 aa11.86□□□□□ -0.51
TTC1-203ENST00000520274 TSR3Q9UJK0 312 aaKnown RBP11.86□□□□□ -0.51
TTC1-203ENST00000520274 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
TTC1-203ENST00000520274 GCGRP47871 477 aa11.85□□□□□ -0.51
TTC1-203ENST00000520274 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
TTC1-203ENST00000520274 RDH13Q8NBN7 331 aa11.85□□□□□ -0.51
TTC1-203ENST00000520274 RNF40O75150 1001 aa11.84□□□□□ -0.51
TTC1-203ENST00000520274 PPP4CP60510 307 aa11.83□□□□□ -0.52
TTC1-203ENST00000520274 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
TTC1-203ENST00000520274 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
TTC1-203ENST00000520274 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
TTC1-203ENST00000520274 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
TTC1-203ENST00000520274 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
TTC1-203ENST00000520274 RNF166Q96A37 237 aaPredicted RBP11.82□□□□□ -0.52
TTC1-203ENST00000520274 CFHP08603 1231 aa11.81□□□□□ -0.52
TTC1-203ENST00000520274 IL27Q8NEV9 243 aa11.81□□□□□ -0.52
TTC1-203ENST00000520274 APLP1P51693 650 aa11.79□□□□□ -0.52
TTC1-203ENST00000520274 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
TTC1-203ENST00000520274 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.53
TTC1-203ENST00000520274 KDM4AO75164 1064 aa11.77□□□□□ -0.53
TTC1-203ENST00000520274 PTPN5P54829 565 aa11.76□□□□□ -0.53
TTC1-203ENST00000520274 KMT5BQ4FZB7 885 aa11.76□□□□□ -0.53
TTC1-203ENST00000520274 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
TTC1-203ENST00000520274 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
TTC1-203ENST00000520274 USP46P62068 366 aa11.74□□□□□ -0.53
TTC1-203ENST00000520274 FUT2Q10981 343 aa11.74□□□□□ -0.53
TTC1-203ENST00000520274 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
TTC1-203ENST00000520274 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
TTC1-203ENST00000520274 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
TTC1-203ENST00000520274 HOXA2O43364 376 aa11.73□□□□□ -0.53
TTC1-203ENST00000520274 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
TTC1-203ENST00000520274 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
TTC1-203ENST00000520274 GOPCQ9HD26 462 aa11.73□□□□□ -0.53
TTC1-203ENST00000520274 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
TTC1-203ENST00000520274 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
TTC1-203ENST00000520274 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
TTC1-203ENST00000520274 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
TTC1-203ENST00000520274 MOXD2PA6NHM9 499 aa11.7□□□□□ -0.54
TTC1-203ENST00000520274 GJA5P36382 358 aa11.69□□□□□ -0.54
TTC1-203ENST00000520274 SKIV2LQ15477 1246 aaKnown RBP11.69□□□□□ -0.54
TTC1-203ENST00000520274 MORN1Q5T089 497 aa11.69□□□□□ -0.54
TTC1-203ENST00000520274 HLA-CQ95604 372 aa11.69□□□□□ -0.54
TTC1-203ENST00000520274 SPTLC1O15269 473 aa11.68□□□□□ -0.54
TTC1-203ENST00000520274 NDUFV2P19404 249 aa11.68□□□□□ -0.54
TTC1-203ENST00000520274 RSBN1LQ6PCB5 846 aaPredicted RBP11.68□□□□□ -0.54
TTC1-203ENST00000520274 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
TTC1-203ENST00000520274 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
TTC1-203ENST00000520274 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
TTC1-203ENST00000520274 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
TTC1-203ENST00000520274 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
TTC1-203ENST00000520274 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
TTC1-203ENST00000520274 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
TTC1-203ENST00000520274 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
TTC1-203ENST00000520274 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
TTC1-203ENST00000520274 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
TTC1-203ENST00000520274 BLOC1S3Q6QNY0 202 aa11.64□□□□□ -0.55
TTC1-203ENST00000520274 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
TTC1-203ENST00000520274 POLR3EQ9NVU0 708 aa11.64□□□□□ -0.55
TTC1-203ENST00000520274 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
TTC1-203ENST00000520274 FDX1P10109 184 aa11.63□□□□□ -0.55
TTC1-203ENST00000520274 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
TTC1-203ENST00000520274 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
TTC1-203ENST00000520274 SCUBE3Q8IX30 993 aa11.62□□□□□ -0.55
TTC1-203ENST00000520274 MTRQ99707 1265 aa11.62□□□□□ -0.55
TTC1-203ENST00000520274 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
TTC1-203ENST00000520274 COPS2P61201 443 aa11.6□□□□□ -0.55
TTC1-203ENST00000520274 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
TTC1-203ENST00000520274 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
TTC1-203ENST00000520274 NR1I2O75469 434 aa11.59□□□□□ -0.55
TTC1-203ENST00000520274 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
TTC1-203ENST00000520274 LILRB3O75022 631 aa11.58□□□□□ -0.56
TTC1-203ENST00000520274 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
TTC1-203ENST00000520274 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms