RNA–Protein interactions for RNA: ENST00000520274.1

TTC1-203, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 3

Gene TTC1, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-203ENST00000520274 AEBP2Q6ZN18 517 aaPredicted RBP28.32■■■□□ 2.12
TTC1-203ENST00000520274 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
TTC1-203ENST00000520274 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
TTC1-203ENST00000520274 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
TTC1-203ENST00000520274 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
TTC1-203ENST00000520274 FOXD1Q16676 465 aa22.24■■□□□ 1.15
TTC1-203ENST00000520274 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
TTC1-203ENST00000520274 ADRA2BP18089 450 aa21.47■■□□□ 1.03
TTC1-203ENST00000520274 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
TTC1-203ENST00000520274 MSH5O43196 834 aa20.4■□□□□ 0.86
TTC1-203ENST00000520274 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
TTC1-203ENST00000520274 KCNA4P22459 653 aa19.61■□□□□ 0.73
TTC1-203ENST00000520274 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
TTC1-203ENST00000520274 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
TTC1-203ENST00000520274 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
TTC1-203ENST00000520274 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
TTC1-203ENST00000520274 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
TTC1-203ENST00000520274 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
TTC1-203ENST00000520274 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
TTC1-203ENST00000520274 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
TTC1-203ENST00000520274 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
TTC1-203ENST00000520274 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
TTC1-203ENST00000520274 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
TTC1-203ENST00000520274 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
TTC1-203ENST00000520274 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
TTC1-203ENST00000520274 ZBTB22O15209 634 aa18.09■□□□□ 0.49
TTC1-203ENST00000520274 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
TTC1-203ENST00000520274 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
TTC1-203ENST00000520274 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
TTC1-203ENST00000520274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
TTC1-203ENST00000520274 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
TTC1-203ENST00000520274 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
TTC1-203ENST00000520274 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
TTC1-203ENST00000520274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
TTC1-203ENST00000520274 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
TTC1-203ENST00000520274 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
TTC1-203ENST00000520274 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
TTC1-203ENST00000520274 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
TTC1-203ENST00000520274 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
TTC1-203ENST00000520274 APLP2Q06481 763 aa17.16■□□□□ 0.34
TTC1-203ENST00000520274 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
TTC1-203ENST00000520274 CAPN15O75808 1086 aa16.96■□□□□ 0.31
TTC1-203ENST00000520274 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
TTC1-203ENST00000520274 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
TTC1-203ENST00000520274 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
TTC1-203ENST00000520274 DSG3P32926 999 aa16.74■□□□□ 0.27
TTC1-203ENST00000520274 POLA2Q14181 598 aa16.71■□□□□ 0.27
TTC1-203ENST00000520274 ABCB7O75027 752 aa16.67■□□□□ 0.26
TTC1-203ENST00000520274 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
TTC1-203ENST00000520274 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
TTC1-203ENST00000520274 FBLN2P98095 1184 aa16.39■□□□□ 0.21
TTC1-203ENST00000520274 FKBP8Q14318 412 aa16.25■□□□□ 0.19
TTC1-203ENST00000520274 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
TTC1-203ENST00000520274 SPDYE4A6NLX3 237 aa16.12■□□□□ 0.17
TTC1-203ENST00000520274 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
TTC1-203ENST00000520274 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
TTC1-203ENST00000520274 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
TTC1-203ENST00000520274 PROM2Q8N271 834 aa15.99■□□□□ 0.15
TTC1-203ENST00000520274 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
TTC1-203ENST00000520274 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
TTC1-203ENST00000520274 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
TTC1-203ENST00000520274 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
TTC1-203ENST00000520274 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
TTC1-203ENST00000520274 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
TTC1-203ENST00000520274 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
TTC1-203ENST00000520274 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
TTC1-203ENST00000520274 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
TTC1-203ENST00000520274 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
TTC1-203ENST00000520274 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
TTC1-203ENST00000520274 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
TTC1-203ENST00000520274 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
TTC1-203ENST00000520274 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
TTC1-203ENST00000520274 MIER1Q8N108 512 aa15.23■□□□□ 0.03
TTC1-203ENST00000520274 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
TTC1-203ENST00000520274 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
TTC1-203ENST00000520274 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
TTC1-203ENST00000520274 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
TTC1-203ENST00000520274 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
TTC1-203ENST00000520274 PLEKHG5O94827 1062 aa15.08■□□□□ 0
TTC1-203ENST00000520274 KLHL34Q8N239 644 aa15.06■□□□□ 0
TTC1-203ENST00000520274 PIP4P2Q8N4L2 257 aa15.05■□□□□ -0
TTC1-203ENST00000520274 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
TTC1-203ENST00000520274 CHADLQ6NUI6 762 aa15.04■□□□□ -0
TTC1-203ENST00000520274 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
TTC1-203ENST00000520274 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
TTC1-203ENST00000520274 SPOCK2Q92563 424 aa15.02■□□□□ -0
TTC1-203ENST00000520274 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
TTC1-203ENST00000520274 NUBP1P53384 320 aa14.93□□□□□ -0.02
TTC1-203ENST00000520274 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
TTC1-203ENST00000520274 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
TTC1-203ENST00000520274 PKD2Q13563 968 aa14.83□□□□□ -0.04
TTC1-203ENST00000520274 RASEFQ8IZ41 740 aa14.81□□□□□ -0.04
TTC1-203ENST00000520274 GSE1Q14687 1217 aa14.72□□□□□ -0.05
TTC1-203ENST00000520274 FAM212AQ96EL1 285 aa14.71□□□□□ -0.05
TTC1-203ENST00000520274 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.05
TTC1-203ENST00000520274 DCAF8Q5TAQ9 597 aa14.69□□□□□ -0.06
TTC1-203ENST00000520274 ECM2O94769 699 aaPredicted RBP14.63□□□□□ -0.07
TTC1-203ENST00000520274 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
TTC1-203ENST00000520274 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
TTC1-203ENST00000520274 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms