RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 HDGFP51858 240 aaKnown RBP25.67■■□□□ 1.7
SDC2-205ENST00000520233 RIMS2Q9UQ26 1411 aa25.67■■□□□ 1.7
SDC2-205ENST00000520233 NEXMIFQ5QGS0 1516 aa25.67■■□□□ 1.7
SDC2-205ENST00000520233 ZFYVE9O95405 1425 aa25.66■■□□□ 1.7
SDC2-205ENST00000520233 DCAF11Q8TEB1 546 aa25.66■■□□□ 1.7
SDC2-205ENST00000520233 STAC3Q96MF2 364 aa25.66■■□□□ 1.7
SDC2-205ENST00000520233 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.65■■□□□ 1.7
SDC2-205ENST00000520233 PPLO60437 1756 aa25.63■■□□□ 1.69
SDC2-205ENST00000520233 IFT172Q9UG01 1749 aa25.63■■□□□ 1.69
SDC2-205ENST00000520233 VGFO15240 615 aaPredicted RBP25.62■■□□□ 1.69
SDC2-205ENST00000520233 MYOM2P54296 1465 aa25.61■■□□□ 1.69
SDC2-205ENST00000520233 KDM2AQ9Y2K7 1162 aa25.61■■□□□ 1.69
SDC2-205ENST00000520233 EID1Q9Y6B2 187 aa25.61■■□□□ 1.69
SDC2-205ENST00000520233 TXNDC2Q86VQ3 553 aa25.6■■□□□ 1.69
SDC2-205ENST00000520233 ANKLE2Q86XL3 938 aa25.59■■□□□ 1.69
SDC2-205ENST00000520233 LTKP29376 864 aa25.58■■□□□ 1.69
SDC2-205ENST00000520233 HSPA2P54652 639 aa25.58■■□□□ 1.69
SDC2-205ENST00000520233 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
SDC2-205ENST00000520233 PPP1R15AO75807 674 aaPredicted RBP25.57■■□□□ 1.68
SDC2-205ENST00000520233 SCAF11Q99590 1463 aaKnown RBP25.57■■□□□ 1.68
SDC2-205ENST00000520233 ADGRF5Q8IZF2 1346 aa25.56■■□□□ 1.68
SDC2-205ENST00000520233 NRXN1Q9ULB1 1477 aa25.55■■□□□ 1.68
SDC2-205ENST00000520233 ZEB1P37275 1124 aaPredicted RBP25.55■■□□□ 1.68
SDC2-205ENST00000520233 PLEKHG1Q9ULL1 1385 aa25.53■■□□□ 1.68
SDC2-205ENST00000520233 PRAG1Q86YV5 1406 aa25.52■■□□□ 1.68
SDC2-205ENST00000520233 PIK3C2GO75747 1445 aa25.5■■□□□ 1.67
SDC2-205ENST00000520233 NCKAP5LQ9HCH0 1330 aa25.5■■□□□ 1.67
SDC2-205ENST00000520233 MED14O60244 1454 aa25.49■■□□□ 1.67
SDC2-205ENST00000520233 POLR1AO95602 1720 aaPredicted RBP25.49■■□□□ 1.67
SDC2-205ENST00000520233 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
SDC2-205ENST00000520233 NPHP4O75161 1426 aaPredicted RBP25.46■■□□□ 1.67
SDC2-205ENST00000520233 SETBP1Q9Y6X0 1596 aa25.46■■□□□ 1.67
SDC2-205ENST00000520233 BCANQ96GW7 911 aa25.45■■□□□ 1.66
SDC2-205ENST00000520233 C14orf93Q9H972 538 aaKnown RBP25.44■■□□□ 1.66
SDC2-205ENST00000520233 NRXN3Q9Y4C0 1643 aa25.43■■□□□ 1.66
SDC2-205ENST00000520233 STRCQ7RTU9 1775 aa25.42■■□□□ 1.66
SDC2-205ENST00000520233 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
SDC2-205ENST00000520233 ADAMTS13Q76LX8 1427 aa25.42■■□□□ 1.66
SDC2-205ENST00000520233 CFAP70Q5T0N1 1121 aa25.41■■□□□ 1.66
SDC2-205ENST00000520233 ALKQ9UM73 1620 aa25.41■■□□□ 1.66
SDC2-205ENST00000520233 IQGAP1P46940 1657 aa25.4■■□□□ 1.66
SDC2-205ENST00000520233 LAMC1P11047 1609 aa25.4■■□□□ 1.66
SDC2-205ENST00000520233 TBX22Q9Y458 520 aa25.39■■□□□ 1.66
SDC2-205ENST00000520233 KIAA1210Q9ULL0 1709 aa25.39■■□□□ 1.65
SDC2-205ENST00000520233 TRPM1Q7Z4N2 1603 aa25.38■■□□□ 1.65
SDC2-205ENST00000520233 SLC26A8Q96RN1 970 aa25.38■■□□□ 1.65
SDC2-205ENST00000520233 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
SDC2-205ENST00000520233 RALGAPBQ86X10 1494 aa25.37■■□□□ 1.65
SDC2-205ENST00000520233 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
SDC2-205ENST00000520233 NBPF1Q3BBV0 1214 aa25.34■■□□□ 1.65
SDC2-205ENST00000520233 SETD1AO15047 1707 aaKnown RBP25.34■■□□□ 1.65
SDC2-205ENST00000520233 ROCK2O75116 1388 aaKnown RBP25.33■■□□□ 1.65
SDC2-205ENST00000520233 METP08581 1390 aa25.31■■□□□ 1.64
SDC2-205ENST00000520233 GPRASP1Q5JY77 1395 aa25.31■■□□□ 1.64
SDC2-205ENST00000520233 ADGRB1O14514 1584 aa25.31■■□□□ 1.64
SDC2-205ENST00000520233 ASXL1Q8IXJ9 1541 aa25.31■■□□□ 1.64
SDC2-205ENST00000520233 TMEM132EQ6IEE7 984 aa25.3■■□□□ 1.64
SDC2-205ENST00000520233 PIK3R4Q99570 1358 aa25.3■■□□□ 1.64
SDC2-205ENST00000520233 CARD11Q9BXL7 1154 aa25.27■■□□□ 1.64
SDC2-205ENST00000520233 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
SDC2-205ENST00000520233 YTHDC2Q9H6S0 1430 aaKnown RBP25.25■■□□□ 1.63
SDC2-205ENST00000520233 PTPRUQ92729 1446 aa25.24■■□□□ 1.63
SDC2-205ENST00000520233 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
SDC2-205ENST00000520233 KCNA6P17658 529 aa25.21■■□□□ 1.63
SDC2-205ENST00000520233 AMOTL2Q9Y2J4 779 aa25.21■■□□□ 1.63
SDC2-205ENST00000520233 STK26Q9P289 416 aa25.2■■□□□ 1.62
SDC2-205ENST00000520233 CHD2O14647 1828 aaKnown RBP25.19■■□□□ 1.62
SDC2-205ENST00000520233 TECPR2O15040 1411 aa25.19■■□□□ 1.62
SDC2-205ENST00000520233 TRAK1Q9UPV9 953 aa25.18■■□□□ 1.62
SDC2-205ENST00000520233 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
SDC2-205ENST00000520233 XRN1Q8IZH2 1706 aaKnown RBP25.17■■□□□ 1.62
SDC2-205ENST00000520233 DLC1Q96QB1 1528 aa25.17■■□□□ 1.62
SDC2-205ENST00000520233 KNDC1Q76NI1 1749 aa25.16■■□□□ 1.62
SDC2-205ENST00000520233 SIRT1Q96EB6 747 aa25.16■■□□□ 1.62
SDC2-205ENST00000520233 CPS1P31327 1500 aa25.14■■□□□ 1.62
SDC2-205ENST00000520233 EIF3AQ14152 1382 aaKnown RBP25.14■■□□□ 1.61
SDC2-205ENST00000520233 USP47Q96K76 1375 aa25.14■■□□□ 1.61
SDC2-205ENST00000520233 PTCH1Q13635 1447 aa25.13■■□□□ 1.61
SDC2-205ENST00000520233 FAM135BQ49AJ0 1406 aa25.12■■□□□ 1.61
SDC2-205ENST00000520233 EIF4G2P78344 907 aaKnown RBP eCLIP25.12■■□□□ 1.61
SDC2-205ENST00000520233 ZNF335Q9H4Z2 1342 aaPredicted RBP25.12■■□□□ 1.61
SDC2-205ENST00000520233 NKTRP30414 1462 aaKnown RBP25.11■■□□□ 1.61
SDC2-205ENST00000520233 ROBO2Q9HCK4 1378 aa25.11■■□□□ 1.61
SDC2-205ENST00000520233 ARHGEF28Q8N1W1 1705 aaKnown RBP25.11■■□□□ 1.61
SDC2-205ENST00000520233 PRAM1Q96QH2 718 aa25.09■■□□□ 1.61
SDC2-205ENST00000520233 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
SDC2-205ENST00000520233 CENPJQ9HC77 1338 aaPredicted RBP25.08■■□□□ 1.6
SDC2-205ENST00000520233 HSPA5P11021 654 aaKnown RBP25.07■■□□□ 1.6
SDC2-205ENST00000520233 WAPLQ7Z5K2 1190 aa25.07■■□□□ 1.6
SDC2-205ENST00000520233 POGKQ9P215 609 aa25.07■■□□□ 1.6
SDC2-205ENST00000520233 ST20-MTHFSA0A0A6YYL1 179 aa25.06■■□□□ 1.6
SDC2-205ENST00000520233 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
SDC2-205ENST00000520233 PROSER2Q86WR7 435 aaPredicted RBP25.05■■□□□ 1.6
SDC2-205ENST00000520233 SAFB2Q14151 953 aaKnown RBP eCLIP25.01■■□□□ 1.59
SDC2-205ENST00000520233 SBNO2Q9Y2G9 1366 aa25.01■■□□□ 1.59
SDC2-205ENST00000520233 NCOA3Q9Y6Q9 1424 aa25.01■■□□□ 1.59
SDC2-205ENST00000520233 LRRC7Q96NW7 1537 aa25■■□□□ 1.59
SDC2-205ENST00000520233 LTBP4Q8N2S1 1624 aa25■■□□□ 1.59
SDC2-205ENST00000520233 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
SDC2-205ENST00000520233 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms