RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 RIMS2Q9UQ26 1411 aa20.54■□□□□ 0.88
VPS37A-206ENST00000520140 LTKP29376 864 aa20.54■□□□□ 0.88
VPS37A-206ENST00000520140 NEXMIFQ5QGS0 1516 aa20.54■□□□□ 0.88
VPS37A-206ENST00000520140 PPLO60437 1756 aa20.54■□□□□ 0.88
VPS37A-206ENST00000520140 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
VPS37A-206ENST00000520140 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
VPS37A-206ENST00000520140 IFT172Q9UG01 1749 aa20.52■□□□□ 0.87
VPS37A-206ENST00000520140 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
VPS37A-206ENST00000520140 NEURL4Q96JN8 1562 aa20.51■□□□□ 0.87
VPS37A-206ENST00000520140 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
VPS37A-206ENST00000520140 NCKAP5LQ9HCH0 1330 aa20.51■□□□□ 0.87
VPS37A-206ENST00000520140 SLIT1O75093 1534 aa20.51■□□□□ 0.87
VPS37A-206ENST00000520140 ARHGAP23Q9P227 1491 aa20.5■□□□□ 0.87
VPS37A-206ENST00000520140 ANKLE2Q86XL3 938 aa20.5■□□□□ 0.87
VPS37A-206ENST00000520140 BCANQ96GW7 911 aa20.5■□□□□ 0.87
VPS37A-206ENST00000520140 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
VPS37A-206ENST00000520140 RPGRIP1LQ68CZ1 1315 aa20.48■□□□□ 0.87
VPS37A-206ENST00000520140 POLR1AO95602 1720 aaPredicted RBP20.47■□□□□ 0.87
VPS37A-206ENST00000520140 VGFO15240 615 aaPredicted RBP20.47■□□□□ 0.87
VPS37A-206ENST00000520140 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
VPS37A-206ENST00000520140 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
VPS37A-206ENST00000520140 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.46■□□□□ 0.87
VPS37A-206ENST00000520140 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
VPS37A-206ENST00000520140 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
VPS37A-206ENST00000520140 MYOM2P54296 1465 aa20.41■□□□□ 0.86
VPS37A-206ENST00000520140 IQGAP1P46940 1657 aa20.41■□□□□ 0.86
VPS37A-206ENST00000520140 NBPF8Q3BBV2 869 aa20.4■□□□□ 0.86
VPS37A-206ENST00000520140 TIMELESSQ9UNS1 1208 aa20.4■□□□□ 0.86
VPS37A-206ENST00000520140 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
VPS37A-206ENST00000520140 NPHP4O75161 1426 aaPredicted RBP20.38■□□□□ 0.85
VPS37A-206ENST00000520140 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
VPS37A-206ENST00000520140 PIK3C2GO75747 1445 aa20.38■□□□□ 0.85
VPS37A-206ENST00000520140 PRAG1Q86YV5 1406 aa20.38■□□□□ 0.85
VPS37A-206ENST00000520140 NRXN3Q9Y4C0 1643 aa20.37■□□□□ 0.85
VPS37A-206ENST00000520140 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
VPS37A-206ENST00000520140 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
VPS37A-206ENST00000520140 MED14O60244 1454 aa20.35■□□□□ 0.85
VPS37A-206ENST00000520140 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
VPS37A-206ENST00000520140 ALKQ9UM73 1620 aa20.34■□□□□ 0.85
VPS37A-206ENST00000520140 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
VPS37A-206ENST00000520140 ADAMTS13Q76LX8 1427 aa20.34■□□□□ 0.85
VPS37A-206ENST00000520140 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
VPS37A-206ENST00000520140 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
VPS37A-206ENST00000520140 TRPM1Q7Z4N2 1603 aa20.31■□□□□ 0.84
VPS37A-206ENST00000520140 METP08581 1390 aa20.3■□□□□ 0.84
VPS37A-206ENST00000520140 SETD1AO15047 1707 aaKnown RBP20.3■□□□□ 0.84
VPS37A-206ENST00000520140 STK26Q9P289 416 aa20.28■□□□□ 0.84
VPS37A-206ENST00000520140 TBX22Q9Y458 520 aa20.27■□□□□ 0.84
VPS37A-206ENST00000520140 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
VPS37A-206ENST00000520140 LAMC1P11047 1609 aa20.27■□□□□ 0.84
VPS37A-206ENST00000520140 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
VPS37A-206ENST00000520140 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
VPS37A-206ENST00000520140 ASXL1Q8IXJ9 1541 aa20.26■□□□□ 0.83
VPS37A-206ENST00000520140 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
VPS37A-206ENST00000520140 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
VPS37A-206ENST00000520140 RALGAPBQ86X10 1494 aa20.23■□□□□ 0.83
VPS37A-206ENST00000520140 ADGRB1O14514 1584 aa20.23■□□□□ 0.83
VPS37A-206ENST00000520140 CARD11Q9BXL7 1154 aa20.23■□□□□ 0.83
VPS37A-206ENST00000520140 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
VPS37A-206ENST00000520140 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
VPS37A-206ENST00000520140 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
VPS37A-206ENST00000520140 AMOTL2Q9Y2J4 779 aa20.21■□□□□ 0.83
VPS37A-206ENST00000520140 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
VPS37A-206ENST00000520140 YTHDC2Q9H6S0 1430 aaKnown RBP20.2■□□□□ 0.82
VPS37A-206ENST00000520140 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
VPS37A-206ENST00000520140 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
VPS37A-206ENST00000520140 KCNA6P17658 529 aa20.19■□□□□ 0.82
VPS37A-206ENST00000520140 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
VPS37A-206ENST00000520140 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
VPS37A-206ENST00000520140 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
VPS37A-206ENST00000520140 GPRASP1Q5JY77 1395 aa20.15■□□□□ 0.82
VPS37A-206ENST00000520140 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
VPS37A-206ENST00000520140 XRN1Q8IZH2 1706 aaKnown RBP20.14■□□□□ 0.82
VPS37A-206ENST00000520140 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
VPS37A-206ENST00000520140 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
VPS37A-206ENST00000520140 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
VPS37A-206ENST00000520140 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
VPS37A-206ENST00000520140 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
VPS37A-206ENST00000520140 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
VPS37A-206ENST00000520140 NWD1Q149M9 1564 aa20.11■□□□□ 0.81
VPS37A-206ENST00000520140 USP47Q96K76 1375 aa20.11■□□□□ 0.81
VPS37A-206ENST00000520140 PROSER2Q86WR7 435 aaPredicted RBP20.11■□□□□ 0.81
VPS37A-206ENST00000520140 POGKQ9P215 609 aa20.11■□□□□ 0.81
VPS37A-206ENST00000520140 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
VPS37A-206ENST00000520140 CPS1P31327 1500 aa20.09■□□□□ 0.81
VPS37A-206ENST00000520140 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
VPS37A-206ENST00000520140 TECPR2O15040 1411 aa20.08■□□□□ 0.8
VPS37A-206ENST00000520140 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
VPS37A-206ENST00000520140 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
VPS37A-206ENST00000520140 PTCH1Q13635 1447 aa20.06■□□□□ 0.8
VPS37A-206ENST00000520140 HSPA5P11021 654 aaKnown RBP20.06■□□□□ 0.8
VPS37A-206ENST00000520140 NKTRP30414 1462 aaKnown RBP20.06■□□□□ 0.8
VPS37A-206ENST00000520140 MINK1Q8N4C8 1332 aaPredicted RBP20.05■□□□□ 0.8
VPS37A-206ENST00000520140 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
VPS37A-206ENST00000520140 EIF3AQ14152 1382 aaKnown RBP20.05■□□□□ 0.8
VPS37A-206ENST00000520140 DLC1Q96QB1 1528 aa20.05■□□□□ 0.8
VPS37A-206ENST00000520140 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
VPS37A-206ENST00000520140 QRICH2Q9H0J4 1663 aa20.05■□□□□ 0.8
VPS37A-206ENST00000520140 LTBP4Q8N2S1 1624 aa20.04■□□□□ 0.8
VPS37A-206ENST00000520140 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms