RNA–Protein interactions for RNA: ENST00000519920.1

EFR3A-203, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-203ENST00000519920 HECW1Q76N89 1606 aa8.68□□□□□ -1.02
EFR3A-203ENST00000519920 RICTORQ6R327 1708 aa8.68□□□□□ -1.02
EFR3A-203ENST00000519920 UBAP1LF5GYI3 381 aa8.67□□□□□ -1.02
EFR3A-203ENST00000519920 ZNF687Q8N1G0 1237 aa8.67□□□□□ -1.02
EFR3A-203ENST00000519920 SETD1BQ9UPS6 1966 aaKnown RBP8.66□□□□□ -1.02
EFR3A-203ENST00000519920 TRAPPC8Q9Y2L5 1435 aa8.66□□□□□ -1.02
EFR3A-203ENST00000519920 NCKAP5LQ9HCH0 1330 aa8.66□□□□□ -1.02
EFR3A-203ENST00000519920 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
EFR3A-203ENST00000519920 SIGLEC1Q9BZZ2 1709 aa8.65□□□□□ -1.03
EFR3A-203ENST00000519920 TTC37Q6PGP7 1564 aa8.65□□□□□ -1.03
EFR3A-203ENST00000519920 CFAP74Q9C0B2 1584 aa8.63□□□□□ -1.03
EFR3A-203ENST00000519920 CDK13Q14004 1512 aaKnown RBP8.63□□□□□ -1.03
EFR3A-203ENST00000519920 EEA1Q15075 1411 aa8.63□□□□□ -1.03
EFR3A-203ENST00000519920 ZNF335Q9H4Z2 1342 aaPredicted RBP8.62□□□□□ -1.03
EFR3A-203ENST00000519920 PKD2Q13563 968 aa8.62□□□□□ -1.03
EFR3A-203ENST00000519920 ZNF518AQ6AHZ1 1483 aa8.62□□□□□ -1.03
EFR3A-203ENST00000519920 ZMYM3Q14202 1370 aa8.61□□□□□ -1.03
EFR3A-203ENST00000519920 STRCQ7RTU9 1775 aa8.61□□□□□ -1.03
EFR3A-203ENST00000519920 ARSIQ5FYB1 569 aa8.61□□□□□ -1.03
EFR3A-203ENST00000519920 NCOA1Q15788 1441 aa8.61□□□□□ -1.03
EFR3A-203ENST00000519920 LTBP4Q8N2S1 1624 aa8.61□□□□□ -1.03
EFR3A-203ENST00000519920 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
EFR3A-203ENST00000519920 MLH3Q9UHC1 1453 aa8.6□□□□□ -1.03
EFR3A-203ENST00000519920 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
EFR3A-203ENST00000519920 PTGER2P43116 358 aa8.6□□□□□ -1.03
EFR3A-203ENST00000519920 NLRP6P59044 892 aa8.6□□□□□ -1.03
EFR3A-203ENST00000519920 TROQ12816 1431 aaPredicted RBP8.6□□□□□ -1.03
EFR3A-203ENST00000519920 FER1L4A9Z1Z3 1794 aa8.6□□□□□ -1.03
EFR3A-203ENST00000519920 FBXO22Q8NEZ5 403 aa8.59□□□□□ -1.03
EFR3A-203ENST00000519920 ZNF777Q9ULD5 760 aaPredicted RBP8.59□□□□□ -1.03
EFR3A-203ENST00000519920 FMN1Q68DA7 1419 aa8.59□□□□□ -1.03
EFR3A-203ENST00000519920 CNTLNQ9NXG0 1405 aa8.59□□□□□ -1.03
EFR3A-203ENST00000519920 PREX1Q8TCU6 1659 aa8.59□□□□□ -1.03
EFR3A-203ENST00000519920 SPATA31D1Q6ZQQ2 1576 aa8.58□□□□□ -1.04
EFR3A-203ENST00000519920 HSPA1LP34931 641 aa8.58□□□□□ -1.04
EFR3A-203ENST00000519920 HNRNPMP52272 730 aaKnown RBP eCLIP8.58□□□□□ -1.04
EFR3A-203ENST00000519920 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■■■■□ 23.4
EFR3A-203ENST00000519920 BCL11BQ9C0K0 894 aaPredicted RBP8.58□□□□□ -1.04
EFR3A-203ENST00000519920 ZNF316A6NFI3 1004 aaPredicted RBP8.57□□□□□ -1.04
EFR3A-203ENST00000519920 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
EFR3A-203ENST00000519920 GGT6Q6P531 493 aa8.57□□□□□ -1.04
EFR3A-203ENST00000519920 ARHGAP5Q13017 1502 aa8.57□□□□□ -1.04
EFR3A-203ENST00000519920 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
EFR3A-203ENST00000519920 CLIP1P30622 1438 aa8.56□□□□□ -1.04
EFR3A-203ENST00000519920 AGLP35573 1532 aa8.56□□□□□ -1.04
EFR3A-203ENST00000519920 TOM1O60784 492 aa8.56□□□□□ -1.04
EFR3A-203ENST00000519920 NPATQ14207 1427 aa8.55□□□□□ -1.04
EFR3A-203ENST00000519920 TAOK2Q9UL54 1235 aa8.55□□□□□ -1.04
EFR3A-203ENST00000519920 KDM5CP41229 1560 aa8.55□□□□□ -1.04
EFR3A-203ENST00000519920 DIP2CQ9Y2E4 1556 aa8.54□□□□□ -1.04
EFR3A-203ENST00000519920 ARHGAP35Q9NRY4 1499 aa8.54□□□□□ -1.04
EFR3A-203ENST00000519920 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
EFR3A-203ENST00000519920 MFRPQ9BY79 579 aa8.54□□□□□ -1.04
EFR3A-203ENST00000519920 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
EFR3A-203ENST00000519920 REREQ9P2R6 1566 aa8.53□□□□□ -1.04
EFR3A-203ENST00000519920 KIF3CO14782 793 aa8.53□□□□□ -1.04
EFR3A-203ENST00000519920 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
EFR3A-203ENST00000519920 CAMSAP1Q5T5Y3 1602 aa8.53□□□□□ -1.04
EFR3A-203ENST00000519920 CFDP1Q9UEE9 299 aaPredicted RBP8.52□□□□□ -1.05
EFR3A-203ENST00000519920 PTPRKQ15262 1439 aa8.52□□□□□ -1.05
EFR3A-203ENST00000519920 KIF14Q15058 1648 aa8.51□□□□□ -1.05
EFR3A-203ENST00000519920 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
EFR3A-203ENST00000519920 AMER1Q5JTC6 1135 aaPredicted RBP8.51□□□□□ -1.05
EFR3A-203ENST00000519920 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
EFR3A-203ENST00000519920 RTN4Q9NQC3 1192 aaKnown RBP8.51□□□□□ -1.05
EFR3A-203ENST00000519920 C3P01024 1663 aa8.5□□□□□ -1.05
EFR3A-203ENST00000519920 STK25O00506 426 aa8.5□□□□□ -1.05
EFR3A-203ENST00000519920 ANKLE2Q86XL3 938 aa8.5□□□□□ -1.05
EFR3A-203ENST00000519920 THEMISQ8N1K5 641 aaPredicted RBP8.5□□□□□ -1.05
EFR3A-203ENST00000519920 PLA2R1Q13018 1463 aa8.5□□□□□ -1.05
EFR3A-203ENST00000519920 TCOF1Q13428 1488 aaKnown RBP8.5□□□□□ -1.05
EFR3A-203ENST00000519920 MYO5CQ9NQX4 1742 aa8.49□□□□□ -1.05
EFR3A-203ENST00000519920 NUDT7P0C024 238 aa8.49□□□□□ -1.05
EFR3A-203ENST00000519920 ABCA6Q8N139 1617 aa8.49□□□□□ -1.05
EFR3A-203ENST00000519920 PBX2P40425 430 aa8.48□□□□□ -1.05
EFR3A-203ENST00000519920 CASKIN1Q8WXD9 1431 aa8.47□□□□□ -1.05
EFR3A-203ENST00000519920 KIAA1107Q9UPP5 1409 aa8.47□□□□□ -1.05
EFR3A-203ENST00000519920 ABCC1P33527 1531 aa8.47□□□□□ -1.05
EFR3A-203ENST00000519920 GPATCH8Q9UKJ3 1502 aaKnown RBP8.47□□□□□ -1.05
EFR3A-203ENST00000519920 ZNF644Q9H582 1327 aaPredicted RBP8.47□□□□□ -1.05
EFR3A-203ENST00000519920 A2MP01023 1474 aa8.46□□□□□ -1.05
EFR3A-203ENST00000519920 KIF3BO15066 747 aa8.46□□□□□ -1.06
EFR3A-203ENST00000519920 SLC34A2O95436 690 aa8.46□□□□□ -1.06
EFR3A-203ENST00000519920 LHX6Q9UPM6 363 aa8.46□□□□□ -1.06
EFR3A-203ENST00000519920 PCDHGA4Q9Y5G9 962 aa8.46□□□□□ -1.06
EFR3A-203ENST00000519920 SAMD9LQ8IVG5 1584 aa8.46□□□□□ -1.06
EFR3A-203ENST00000519920 KIDINS220Q9ULH0 1771 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 POTEEQ6S8J3 1075 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 WASHC2CQ9Y4E1 1318 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 CDC42BPBQ9Y5S2 1711 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 DHX29Q7Z478 1369 aaKnown RBP8.45□□□□□ -1.06
EFR3A-203ENST00000519920 CCNB3Q8WWL7 1395 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 TNRQ92752 1358 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.45□□□□□ -1.06
EFR3A-203ENST00000519920 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
EFR3A-203ENST00000519920 RGS17Q9UGC6 210 aaPredicted RBP8.44□□□□□ -1.06
EFR3A-203ENST00000519920 CCDC18Q5T9S5 1454 aa8.44□□□□□ -1.06
EFR3A-203ENST00000519920 ECM2O94769 699 aaPredicted RBP8.43□□□□□ -1.06
EFR3A-203ENST00000519920 TMC2Q8TDI7 906 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms