RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 UBR1Q8IWV7 1749 aa21.19■□□□□ 0.98
PABPC1-210ENST00000519363 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
PABPC1-210ENST00000519363 A2ML1A8K2U0 1454 aa21.19■□□□□ 0.98
PABPC1-210ENST00000519363 MYO3AQ8NEV4 1616 aa21.17■□□□□ 0.98
PABPC1-210ENST00000519363 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
PABPC1-210ENST00000519363 CHGAP10645 457 aaKnown RBP21.16■□□□□ 0.98
PABPC1-210ENST00000519363 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
PABPC1-210ENST00000519363 IQGAP1P46940 1657 aa21.15■□□□□ 0.98
PABPC1-210ENST00000519363 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
PABPC1-210ENST00000519363 EIF4G2P78344 907 aaKnown RBP eCLIP21.15■□□□□ 0.98
PABPC1-210ENST00000519363 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.98
PABPC1-210ENST00000519363 USP47Q96K76 1375 aa21.13■□□□□ 0.97
PABPC1-210ENST00000519363 ZNF142P52746 1687 aaPredicted RBP21.12■□□□□ 0.97
PABPC1-210ENST00000519363 ADGRF5Q8IZF2 1346 aa21.11■□□□□ 0.97
PABPC1-210ENST00000519363 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
PABPC1-210ENST00000519363 CARD11Q9BXL7 1154 aa21.1■□□□□ 0.97
PABPC1-210ENST00000519363 SETD1BQ9UPS6 1966 aaKnown RBP21.09■□□□□ 0.97
PABPC1-210ENST00000519363 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
PABPC1-210ENST00000519363 CEP170BQ9Y4F5 1589 aaPredicted RBP21.07■□□□□ 0.96
PABPC1-210ENST00000519363 RIMS2Q9UQ26 1411 aa21.07■□□□□ 0.96
PABPC1-210ENST00000519363 CEBPAP49715 358 aaPredicted RBP21.07■□□□□ 0.96
PABPC1-210ENST00000519363 STAG3Q9UJ98 1225 aa21.07■□□□□ 0.96
PABPC1-210ENST00000519363 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
PABPC1-210ENST00000519363 SLIT1O75093 1534 aa21.05■□□□□ 0.96
PABPC1-210ENST00000519363 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
PABPC1-210ENST00000519363 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
PABPC1-210ENST00000519363 PTPRMP28827 1452 aa21.04■□□□□ 0.96
PABPC1-210ENST00000519363 SETD1AO15047 1707 aaKnown RBP21.04■□□□□ 0.96
PABPC1-210ENST00000519363 ARHGAP23Q9P227 1491 aa21.03■□□□□ 0.96
PABPC1-210ENST00000519363 TMEM2Q9UHN6 1383 aa21.02■□□□□ 0.96
PABPC1-210ENST00000519363 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
PABPC1-210ENST00000519363 NRXN3Q9Y4C0 1643 aa21.01■□□□□ 0.95
PABPC1-210ENST00000519363 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.01■□□□□ 0.95
PABPC1-210ENST00000519363 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
PABPC1-210ENST00000519363 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
PABPC1-210ENST00000519363 ALKQ9UM73 1620 aa20.99■□□□□ 0.95
PABPC1-210ENST00000519363 EIF3AQ14152 1382 aaKnown RBP20.98■□□□□ 0.95
PABPC1-210ENST00000519363 HIRIP3Q9BW71 556 aaPredicted RBP20.98■□□□□ 0.95
PABPC1-210ENST00000519363 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
PABPC1-210ENST00000519363 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
PABPC1-210ENST00000519363 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
PABPC1-210ENST00000519363 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
PABPC1-210ENST00000519363 ST20-MTHFSA0A0A6YYL1 179 aa20.93■□□□□ 0.94
PABPC1-210ENST00000519363 NUTM2DQ5VT03 806 aaPredicted RBP20.93■□□□□ 0.94
PABPC1-210ENST00000519363 THEMISQ8N1K5 641 aaPredicted RBP20.92■□□□□ 0.94
PABPC1-210ENST00000519363 WASHC2AQ641Q2 1341 aa20.92■□□□□ 0.94
PABPC1-210ENST00000519363 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
PABPC1-210ENST00000519363 DIP2AQ14689 1571 aa20.91■□□□□ 0.94
PABPC1-210ENST00000519363 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
PABPC1-210ENST00000519363 SBNO2Q9Y2G9 1366 aa20.9■□□□□ 0.94
PABPC1-210ENST00000519363 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
PABPC1-210ENST00000519363 QRICH2Q9H0J4 1663 aa20.89■□□□□ 0.94
PABPC1-210ENST00000519363 TESK2Q96S53 571 aa20.88■□□□□ 0.93
PABPC1-210ENST00000519363 DLC1Q96QB1 1528 aa20.88■□□□□ 0.93
PABPC1-210ENST00000519363 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
PABPC1-210ENST00000519363 MED14O60244 1454 aa20.87■□□□□ 0.93
PABPC1-210ENST00000519363 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
PABPC1-210ENST00000519363 C11orf95C9JLR9 678 aaPredicted RBP20.86■□□□□ 0.93
PABPC1-210ENST00000519363 ADAMTS13Q76LX8 1427 aa20.86■□□□□ 0.93
PABPC1-210ENST00000519363 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
PABPC1-210ENST00000519363 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
PABPC1-210ENST00000519363 LTKP29376 864 aa20.83■□□□□ 0.93
PABPC1-210ENST00000519363 LRPPRCP42704 1394 aaKnown RBP20.83■□□□□ 0.92
PABPC1-210ENST00000519363 TECPR2O15040 1411 aa20.82■□□□□ 0.92
PABPC1-210ENST00000519363 TMEM132EQ6IEE7 984 aa20.82■□□□□ 0.92
PABPC1-210ENST00000519363 TXNDC2Q86VQ3 553 aa20.82■□□□□ 0.92
PABPC1-210ENST00000519363 CPS1P31327 1500 aa20.82■□□□□ 0.92
PABPC1-210ENST00000519363 CENPJQ9HC77 1338 aaPredicted RBP20.81■□□□□ 0.92
PABPC1-210ENST00000519363 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
PABPC1-210ENST00000519363 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
PABPC1-210ENST00000519363 TMF1P82094 1093 aa20.79■□□□□ 0.92
PABPC1-210ENST00000519363 ABCC11Q96J66 1382 aa20.79■□□□□ 0.92
PABPC1-210ENST00000519363 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
PABPC1-210ENST00000519363 TRAK1Q9UPV9 953 aa20.78■□□□□ 0.92
PABPC1-210ENST00000519363 METP08581 1390 aa20.77■□□□□ 0.92
PABPC1-210ENST00000519363 MYOM1P52179 1685 aa20.77■□□□□ 0.91
PABPC1-210ENST00000519363 XRN1Q8IZH2 1706 aaKnown RBP20.75■□□□□ 0.91
PABPC1-210ENST00000519363 CDCA8Q53HL2 280 aa20.75■□□□□ 0.91
PABPC1-210ENST00000519363 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
PABPC1-210ENST00000519363 TBX22Q9Y458 520 aa20.74■□□□□ 0.91
PABPC1-210ENST00000519363 TULP4Q9NRJ4 1543 aa20.73■□□□□ 0.91
PABPC1-210ENST00000519363 PIK3R4Q99570 1358 aa20.73■□□□□ 0.91
PABPC1-210ENST00000519363 ANKLE2Q86XL3 938 aa20.73■□□□□ 0.91
PABPC1-210ENST00000519363 SIRT1Q96EB6 747 aa20.71■□□□□ 0.91
PABPC1-210ENST00000519363 PTCH1Q13635 1447 aa20.7■□□□□ 0.9
PABPC1-210ENST00000519363 CHD2O14647 1828 aaKnown RBP20.7■□□□□ 0.9
PABPC1-210ENST00000519363 BCANQ96GW7 911 aa20.7■□□□□ 0.9
PABPC1-210ENST00000519363 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
PABPC1-210ENST00000519363 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
PABPC1-210ENST00000519363 STK26Q9P289 416 aa20.69■□□□□ 0.9
PABPC1-210ENST00000519363 ADGRB2O60241 1585 aa20.68■□□□□ 0.9
PABPC1-210ENST00000519363 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
PABPC1-210ENST00000519363 PTPRUQ92729 1446 aa20.68■□□□□ 0.9
PABPC1-210ENST00000519363 LMTK3Q96Q04 1460 aa20.68■□□□□ 0.9
PABPC1-210ENST00000519363 PRAM1Q96QH2 718 aa20.67■□□□□ 0.9
PABPC1-210ENST00000519363 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
PABPC1-210ENST00000519363 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
PABPC1-210ENST00000519363 NWD1Q149M9 1564 aa20.64■□□□□ 0.9
PABPC1-210ENST00000519363 EVC2Q86UK5 1308 aa20.64■□□□□ 0.89
PABPC1-210ENST00000519363 POGKQ9P215 609 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms