RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 NCOA3Q9Y6Q9 1424 aa13.43□□□□□ -0.26
CTNNA1-215ENST00000519309 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
CTNNA1-215ENST00000519309 DAPK1P53355 1430 aa13.42□□□□□ -0.26
CTNNA1-215ENST00000519309 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
CTNNA1-215ENST00000519309 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-215ENST00000519309 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
CTNNA1-215ENST00000519309 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
CTNNA1-215ENST00000519309 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
CTNNA1-215ENST00000519309 IDI1Q13907 227 aa13.4□□□□□ -0.26
CTNNA1-215ENST00000519309 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
CTNNA1-215ENST00000519309 ADGRL2O95490 1459 aa13.38□□□□□ -0.27
CTNNA1-215ENST00000519309 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
CTNNA1-215ENST00000519309 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
CTNNA1-215ENST00000519309 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTNNA1-215ENST00000519309 NHSL1Q5SYE7 1610 aa13.37□□□□□ -0.27
CTNNA1-215ENST00000519309 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-215ENST00000519309 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 ZNF772Q68DY9 489 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 SLC52A1Q9NWF4 448 aa13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 DCCP43146 1447 aa13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 UNC13BO14795 1591 aa13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 XRN1Q8IZH2 1706 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-215ENST00000519309 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
CTNNA1-215ENST00000519309 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
CTNNA1-215ENST00000519309 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
CTNNA1-215ENST00000519309 RRP7BPQ9NSQ0 103 aa13.34□□□□□ -0.27
CTNNA1-215ENST00000519309 TRPM2O94759 1503 aa13.33□□□□□ -0.28
CTNNA1-215ENST00000519309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.284e-8■□□□□ 10.1
CTNNA1-215ENST00000519309 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
CTNNA1-215ENST00000519309 E9PCH4 1651 aa13.31□□□□□ -0.28
CTNNA1-215ENST00000519309 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
CTNNA1-215ENST00000519309 RGS12O14924 1447 aa13.3□□□□□ -0.28
CTNNA1-215ENST00000519309 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
CTNNA1-215ENST00000519309 IQGAP3Q86VI3 1631 aa13.29□□□□□ -0.28
CTNNA1-215ENST00000519309 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-215ENST00000519309 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
CTNNA1-215ENST00000519309 TBX22Q9Y458 520 aa13.29□□□□□ -0.28
CTNNA1-215ENST00000519309 LAMC1P11047 1609 aa13.28□□□□□ -0.28
CTNNA1-215ENST00000519309 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
CTNNA1-215ENST00000519309 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
CTNNA1-215ENST00000519309 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
CTNNA1-215ENST00000519309 ANKRD50Q9ULJ7 1429 aa13.27□□□□□ -0.29
CTNNA1-215ENST00000519309 RXRBP28702 533 aa13.26□□□□□ -0.29
CTNNA1-215ENST00000519309 MST1RQ04912 1400 aa13.26□□□□□ -0.29
CTNNA1-215ENST00000519309 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
CTNNA1-215ENST00000519309 PTPRUQ92729 1446 aa13.26□□□□□ -0.29
CTNNA1-215ENST00000519309 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
CTNNA1-215ENST00000519309 PPP1R15AO75807 674 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-215ENST00000519309 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-215ENST00000519309 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
CTNNA1-215ENST00000519309 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTNNA1-215ENST00000519309 AFF2P51816 1311 aa13.24□□□□□ -0.29
CTNNA1-215ENST00000519309 BCANQ96GW7 911 aa13.24□□□□□ -0.29
CTNNA1-215ENST00000519309 ATF3P18847 181 aa13.23□□□□□ -0.29
CTNNA1-215ENST00000519309 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
CTNNA1-215ENST00000519309 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
CTNNA1-215ENST00000519309 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
CTNNA1-215ENST00000519309 SPHKAPQ2M3C7 1700 aa13.2□□□□□ -0.3
CTNNA1-215ENST00000519309 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
CTNNA1-215ENST00000519309 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-215ENST00000519309 EP400Q96L91 3159 aa13.18□□□□□ -0.3
CTNNA1-215ENST00000519309 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-215ENST00000519309 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
CTNNA1-215ENST00000519309 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-215ENST00000519309 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
CTNNA1-215ENST00000519309 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-215ENST00000519309 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-215ENST00000519309 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-215ENST00000519309 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
CTNNA1-215ENST00000519309 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
CTNNA1-215ENST00000519309 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-215ENST00000519309 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
CTNNA1-215ENST00000519309 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-215ENST00000519309 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
CTNNA1-215ENST00000519309 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
CTNNA1-215ENST00000519309 ATRNO75882 1429 aa13.13□□□□□ -0.31
CTNNA1-215ENST00000519309 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CTNNA1-215ENST00000519309 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-215ENST00000519309 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-215ENST00000519309 MYOM2P54296 1465 aa13.11□□□□□ -0.31
CTNNA1-215ENST00000519309 METP08581 1390 aa13.11□□□□□ -0.31
CTNNA1-215ENST00000519309 CLTCL1P53675 1640 aa13.11□□□□□ -0.31
CTNNA1-215ENST00000519309 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-215ENST00000519309 LRP5O75197 1615 aa13.1□□□□□ -0.31
CTNNA1-215ENST00000519309 APLP2Q06481 763 aa13.1□□□□□ -0.31
CTNNA1-215ENST00000519309 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
CTNNA1-215ENST00000519309 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
CTNNA1-215ENST00000519309 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-215ENST00000519309 KIF1BO60333 1816 aa13.09□□□□□ -0.31
CTNNA1-215ENST00000519309 FOXD1Q16676 465 aa13.07□□□□□ -0.32
CTNNA1-215ENST00000519309 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
CTNNA1-215ENST00000519309 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
CTNNA1-215ENST00000519309 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-215ENST00000519309 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
CTNNA1-215ENST00000519309 PXDNQ92626 1479 aa13.05□□□□□ -0.32
CTNNA1-215ENST00000519309 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-215ENST00000519309 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
CTNNA1-215ENST00000519309 NUP155O75694 1391 aa13.05□□□□□ -0.32
CTNNA1-215ENST00000519309 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms