RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
SDCBP-206ENST00000519115 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
SDCBP-206ENST00000519115 KIF1BO60333 1816 aa11.25□□□□□ -0.61
SDCBP-206ENST00000519115 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
SDCBP-206ENST00000519115 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
SDCBP-206ENST00000519115 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
SDCBP-206ENST00000519115 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
SDCBP-206ENST00000519115 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
SDCBP-206ENST00000519115 TMEM2Q9UHN6 1383 aa11.23□□□□□ -0.61
SDCBP-206ENST00000519115 MED14O60244 1454 aa11.22□□□□□ -0.61
SDCBP-206ENST00000519115 LTKP29376 864 aa11.22□□□□□ -0.61
SDCBP-206ENST00000519115 LTBP4Q8N2S1 1624 aa11.21□□□□□ -0.61
SDCBP-206ENST00000519115 TXNDC2Q86VQ3 553 aa11.21□□□□□ -0.61
SDCBP-206ENST00000519115 ZFYVE9O95405 1425 aa11.2□□□□□ -0.62
SDCBP-206ENST00000519115 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-206ENST00000519115 MPHOSPH9Q99550 1183 aa11.2□□□□□ -0.62
SDCBP-206ENST00000519115 STRCP1A6NGW2 1772 aa11.2□□□□□ -0.62
SDCBP-206ENST00000519115 RIMS2Q9UQ26 1411 aa11.19□□□□□ -0.62
SDCBP-206ENST00000519115 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
SDCBP-206ENST00000519115 KCNA4P22459 653 aa11.19□□□□□ -0.62
SDCBP-206ENST00000519115 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
SDCBP-206ENST00000519115 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
SDCBP-206ENST00000519115 NUTM2DQ5VT03 806 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-206ENST00000519115 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
SDCBP-206ENST00000519115 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
SDCBP-206ENST00000519115 PPLO60437 1756 aa11.16□□□□□ -0.62
SDCBP-206ENST00000519115 NEXMIFQ5QGS0 1516 aa11.15□□□□□ -0.62
SDCBP-206ENST00000519115 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.62
SDCBP-206ENST00000519115 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
SDCBP-206ENST00000519115 BCANQ96GW7 911 aa11.14□□□□□ -0.63
SDCBP-206ENST00000519115 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
SDCBP-206ENST00000519115 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
SDCBP-206ENST00000519115 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
SDCBP-206ENST00000519115 SLC26A8Q96RN1 970 aa11.13□□□□□ -0.63
SDCBP-206ENST00000519115 CPS1P31327 1500 aa11.13□□□□□ -0.63
SDCBP-206ENST00000519115 CHD2O14647 1828 aaKnown RBP11.12□□□□□ -0.63
SDCBP-206ENST00000519115 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
SDCBP-206ENST00000519115 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.12□□□□□ -0.63
SDCBP-206ENST00000519115 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
SDCBP-206ENST00000519115 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
SDCBP-206ENST00000519115 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
SDCBP-206ENST00000519115 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
SDCBP-206ENST00000519115 ADAMTS13Q76LX8 1427 aa11.1□□□□□ -0.63
SDCBP-206ENST00000519115 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
SDCBP-206ENST00000519115 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
SDCBP-206ENST00000519115 IQSEC2Q5JU85 1478 aa11.09□□□□□ -0.63
SDCBP-206ENST00000519115 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
SDCBP-206ENST00000519115 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
SDCBP-206ENST00000519115 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
SDCBP-206ENST00000519115 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
SDCBP-206ENST00000519115 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
SDCBP-206ENST00000519115 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
SDCBP-206ENST00000519115 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
SDCBP-206ENST00000519115 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
SDCBP-206ENST00000519115 KCNA6P17658 529 aa11.05□□□□□ -0.64
SDCBP-206ENST00000519115 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-206ENST00000519115 TIMELESSQ9UNS1 1208 aa11.05□□□□□ -0.64
SDCBP-206ENST00000519115 TBX22Q9Y458 520 aa11.05□□□□□ -0.64
SDCBP-206ENST00000519115 ALKQ9UM73 1620 aa11.05□□□□□ -0.64
SDCBP-206ENST00000519115 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
SDCBP-206ENST00000519115 PTPRUQ92729 1446 aa11.04□□□□□ -0.64
SDCBP-206ENST00000519115 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
SDCBP-206ENST00000519115 HOXD11P31277 338 aaPredicted RBP11.04□□□□□ -0.64
SDCBP-206ENST00000519115 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
SDCBP-206ENST00000519115 METP08581 1390 aa11.03□□□□□ -0.64
SDCBP-206ENST00000519115 UBAP1LF5GYI3 381 aa11.03□□□□□ -0.64
SDCBP-206ENST00000519115 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
SDCBP-206ENST00000519115 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
SDCBP-206ENST00000519115 PROSER2Q86WR7 435 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-206ENST00000519115 PIK3R4Q99570 1358 aa11.02□□□□□ -0.65
SDCBP-206ENST00000519115 MYOM2P54296 1465 aa11.01□□□□□ -0.65
SDCBP-206ENST00000519115 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
SDCBP-206ENST00000519115 PIK3C2GO75747 1445 aa11.01□□□□□ -0.65
SDCBP-206ENST00000519115 ASXL1Q8IXJ9 1541 aa11□□□□□ -0.65
SDCBP-206ENST00000519115 LAMC1P11047 1609 aa11□□□□□ -0.65
SDCBP-206ENST00000519115 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
SDCBP-206ENST00000519115 NALCNQ8IZF0 1738 aa10.99□□□□□ -0.65
SDCBP-206ENST00000519115 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.99□□□□□ -0.65
SDCBP-206ENST00000519115 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
SDCBP-206ENST00000519115 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
SDCBP-206ENST00000519115 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
SDCBP-206ENST00000519115 KNDC1Q76NI1 1749 aa10.98□□□□□ -0.65
SDCBP-206ENST00000519115 TOM1O60784 492 aa10.97□□□□□ -0.65
SDCBP-206ENST00000519115 CACNB1Q02641 598 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-206ENST00000519115 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
SDCBP-206ENST00000519115 DCAF11Q8TEB1 546 aa10.97□□□□□ -0.65
SDCBP-206ENST00000519115 MSH6P52701 1360 aa10.96□□□□□ -0.65
SDCBP-206ENST00000519115 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.65
SDCBP-206ENST00000519115 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
SDCBP-206ENST00000519115 ROBO2Q9HCK4 1378 aa10.95□□□□□ -0.66
SDCBP-206ENST00000519115 TMEM132EQ6IEE7 984 aa10.95□□□□□ -0.66
SDCBP-206ENST00000519115 ROBO1Q9Y6N7 1651 aa10.95□□□□□ -0.66
SDCBP-206ENST00000519115 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
SDCBP-206ENST00000519115 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
SDCBP-206ENST00000519115 STK26Q9P289 416 aa10.94□□□□□ -0.66
SDCBP-206ENST00000519115 PRAG1Q86YV5 1406 aa10.93□□□□□ -0.66
SDCBP-206ENST00000519115 ADGRL3Q9HAR2 1447 aa10.93□□□□□ -0.66
SDCBP-206ENST00000519115 YTHDC2Q9H6S0 1430 aaKnown RBP10.92□□□□□ -0.66
SDCBP-206ENST00000519115 NCOA3Q9Y6Q9 1424 aa10.92□□□□□ -0.66
SDCBP-206ENST00000519115 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms