RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 WNT2BQ93097 391 aa11.88□□□□□ -0.51
SQLE-203ENST00000518931 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
SQLE-203ENST00000518931 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
SQLE-203ENST00000518931 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
SQLE-203ENST00000518931 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
SQLE-203ENST00000518931 PARP9Q8IXQ6 854 aa11.86□□□□□ -0.51
SQLE-203ENST00000518931 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
SQLE-203ENST00000518931 TMUB1Q9BVT8 246 aa11.86□□□□□ -0.51
SQLE-203ENST00000518931 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
SQLE-203ENST00000518931 GPBP1L1Q9HC44 474 aaPredicted RBP11.85□□□□□ -0.51
SQLE-203ENST00000518931 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.85□□□□□ -0.51
SQLE-203ENST00000518931 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
SQLE-203ENST00000518931 GIGYF2Q6Y7W6 1299 aaKnown RBP11.84□□□□□ -0.51
SQLE-203ENST00000518931 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
SQLE-203ENST00000518931 RNF40O75150 1001 aa11.83□□□□□ -0.52
SQLE-203ENST00000518931 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
SQLE-203ENST00000518931 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
SQLE-203ENST00000518931 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
SQLE-203ENST00000518931 BCAMP50895 628 aa11.82□□□□□ -0.52
SQLE-203ENST00000518931 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
SQLE-203ENST00000518931 KDM4CQ9H3R0 1056 aa11.81□□□□□ -0.52
SQLE-203ENST00000518931 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
SQLE-203ENST00000518931 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
SQLE-203ENST00000518931 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
SQLE-203ENST00000518931 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
SQLE-203ENST00000518931 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
SQLE-203ENST00000518931 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
SQLE-203ENST00000518931 SLC10A3P09131 477 aa11.78□□□□□ -0.52
SQLE-203ENST00000518931 PPP4CP60510 307 aa11.78□□□□□ -0.52
SQLE-203ENST00000518931 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
SQLE-203ENST00000518931 MS4A1P11836 297 aa11.77□□□□□ -0.53
SQLE-203ENST00000518931 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
SQLE-203ENST00000518931 PTPN5P54829 565 aa11.76□□□□□ -0.53
SQLE-203ENST00000518931 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
SQLE-203ENST00000518931 CD46P15529 392 aa11.74□□□□□ -0.53
SQLE-203ENST00000518931 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
SQLE-203ENST00000518931 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
SQLE-203ENST00000518931 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
SQLE-203ENST00000518931 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
SQLE-203ENST00000518931 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
SQLE-203ENST00000518931 CFHP08603 1231 aa11.7□□□□□ -0.54
SQLE-203ENST00000518931 GCGRP47871 477 aa11.7□□□□□ -0.54
SQLE-203ENST00000518931 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
SQLE-203ENST00000518931 KMT5BQ4FZB7 885 aa11.68□□□□□ -0.54
SQLE-203ENST00000518931 APLP1P51693 650 aa11.67□□□□□ -0.54
SQLE-203ENST00000518931 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
SQLE-203ENST00000518931 NUTM1Q86Y26 1132 aa11.66□□□□□ -0.54
SQLE-203ENST00000518931 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
SQLE-203ENST00000518931 KDM4AO75164 1064 aa11.65□□□□□ -0.54
SQLE-203ENST00000518931 NYAP1Q6ZVC0 841 aa11.64□□□□□ -0.55
SQLE-203ENST00000518931 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
SQLE-203ENST00000518931 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
SQLE-203ENST00000518931 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
SQLE-203ENST00000518931 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
SQLE-203ENST00000518931 FUT2Q10981 343 aa11.62□□□□□ -0.55
SQLE-203ENST00000518931 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
SQLE-203ENST00000518931 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
SQLE-203ENST00000518931 DIXDC1Q155Q3 683 aa11.6□□□□□ -0.55
SQLE-203ENST00000518931 USP46P62068 366 aa11.59□□□□□ -0.55
SQLE-203ENST00000518931 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
SQLE-203ENST00000518931 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
SQLE-203ENST00000518931 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
SQLE-203ENST00000518931 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
SQLE-203ENST00000518931 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
SQLE-203ENST00000518931 HOXA2O43364 376 aa11.56□□□□□ -0.56
SQLE-203ENST00000518931 NDUFV2P19404 249 aa11.56□□□□□ -0.56
SQLE-203ENST00000518931 MYSM1Q5VVJ2 828 aa11.56□□□□□ -0.56
SQLE-203ENST00000518931 HLA-CQ95604 372 aa11.56□□□□□ -0.56
SQLE-203ENST00000518931 COPS2P61201 443 aa11.55□□□□□ -0.56
SQLE-203ENST00000518931 BLOC1S3Q6QNY0 202 aa11.55□□□□□ -0.56
SQLE-203ENST00000518931 POLR3EQ9NVU0 708 aa11.55□□□□□ -0.56
SQLE-203ENST00000518931 MORN1Q5T089 497 aa11.54□□□□□ -0.56
SQLE-203ENST00000518931 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
SQLE-203ENST00000518931 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
SQLE-203ENST00000518931 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
SQLE-203ENST00000518931 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
SQLE-203ENST00000518931 SCUBE3Q8IX30 993 aa11.52□□□□□ -0.57
SQLE-203ENST00000518931 MTRQ99707 1265 aa11.52□□□□□ -0.57
SQLE-203ENST00000518931 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.57
SQLE-203ENST00000518931 SLC27A5Q9Y2P5 690 aa11.52□□□□□ -0.57
SQLE-203ENST00000518931 FDX1P10109 184 aa11.51□□□□□ -0.57
SQLE-203ENST00000518931 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
SQLE-203ENST00000518931 RSBN1LQ6PCB5 846 aaPredicted RBP11.51□□□□□ -0.57
SQLE-203ENST00000518931 SPTLC1O15269 473 aa11.5□□□□□ -0.57
SQLE-203ENST00000518931 NR1I2O75469 434 aa11.5□□□□□ -0.57
SQLE-203ENST00000518931 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
SQLE-203ENST00000518931 LIMD1Q9UGP4 676 aa11.5□□□□□ -0.57
SQLE-203ENST00000518931 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
SQLE-203ENST00000518931 PCDHGC3Q9UN70 934 aa11.49□□□□□ -0.57
SQLE-203ENST00000518931 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
SQLE-203ENST00000518931 PROCA1Q8NCQ7 364 aaPredicted RBP11.48□□□□□ -0.57
SQLE-203ENST00000518931 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
SQLE-203ENST00000518931 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
SQLE-203ENST00000518931 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
SQLE-203ENST00000518931 ZPR1O75312 459 aa11.47□□□□□ -0.57
SQLE-203ENST00000518931 GJA5P36382 358 aa11.47□□□□□ -0.57
SQLE-203ENST00000518931 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
SQLE-203ENST00000518931 PCMTD1Q96MG8 357 aaPredicted RBP11.46□□□□□ -0.57
SQLE-203ENST00000518931 KCNC4Q03721 635 aa11.45□□□□□ -0.58
SQLE-203ENST00000518931 SYMPKQ92797 1274 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms