RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 NEXMIFQ5QGS0 1516 aa35.27■■■■□ 3.24
PCM1-209ENST00000518930 TXNDC2Q86VQ3 553 aa35.25■■■■□ 3.23
PCM1-209ENST00000518930 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.25■■■■□ 3.23
PCM1-209ENST00000518930 NCKAP5LQ9HCH0 1330 aa35.25■■■■□ 3.23
PCM1-209ENST00000518930 PPLO60437 1756 aa35.25■■■■□ 3.23
PCM1-209ENST00000518930 PPP1R15AO75807 674 aaPredicted RBP35.24■■■■□ 3.23
PCM1-209ENST00000518930 RGL3Q3MIN7 710 aa35.24■■■■□ 3.23
PCM1-209ENST00000518930 CCER1Q8TC90 406 aaPredicted RBP35.23■■■■□ 3.23
PCM1-209ENST00000518930 IFT172Q9UG01 1749 aa35.22■■■■□ 3.23
PCM1-209ENST00000518930 RPGRIP1LQ68CZ1 1315 aa35.22■■■■□ 3.23
PCM1-209ENST00000518930 LTKP29376 864 aa35.2■■■■□ 3.23
PCM1-209ENST00000518930 IQGAP1P46940 1657 aa35.2■■■■□ 3.23
PCM1-209ENST00000518930 SIN3AQ96ST3 1273 aa35.19■■■■□ 3.22
PCM1-209ENST00000518930 CLSPNQ9HAW4 1339 aa35.19■■■■□ 3.22
PCM1-209ENST00000518930 MED14O60244 1454 aa35.18■■■■□ 3.22
PCM1-209ENST00000518930 NPHP4O75161 1426 aaPredicted RBP35.17■■■■□ 3.22
PCM1-209ENST00000518930 NEUROD1Q13562 356 aa35.17■■■■□ 3.22
PCM1-209ENST00000518930 NUTM2DQ5VT03 806 aaPredicted RBP35.16■■■■□ 3.22
PCM1-209ENST00000518930 DMRT2Q9Y5R5 561 aa35.15■■■■□ 3.22
PCM1-209ENST00000518930 PLEKHG1Q9ULL1 1385 aa35.13■■■■□ 3.21
PCM1-209ENST00000518930 VGFO15240 615 aaPredicted RBP35.11■■■■□ 3.21
PCM1-209ENST00000518930 BCANQ96GW7 911 aa35.09■■■■□ 3.21
PCM1-209ENST00000518930 MYOM2P54296 1465 aa35.09■■■■□ 3.21
PCM1-209ENST00000518930 SETBP1Q9Y6X0 1596 aa35.05■■■■□ 3.2
PCM1-209ENST00000518930 TONSLQ96HA7 1378 aa35.03■■■■□ 3.2
PCM1-209ENST00000518930 DCAF11Q8TEB1 546 aa35.03■■■■□ 3.2
PCM1-209ENST00000518930 SENP3Q9H4L4 574 aaPredicted RBP35.03■■■■□ 3.2
PCM1-209ENST00000518930 DIP2AQ14689 1571 aa35.03■■■■□ 3.2
PCM1-209ENST00000518930 NRXN3Q9Y4C0 1643 aa35.01■■■■□ 3.19
PCM1-209ENST00000518930 STAC3Q96MF2 364 aa35■■■■□ 3.19
PCM1-209ENST00000518930 ADGRF5Q8IZF2 1346 aa34.99■■■■□ 3.19
PCM1-209ENST00000518930 KDM2AQ9Y2K7 1162 aa34.98■■■■□ 3.19
PCM1-209ENST00000518930 NRXN1Q9ULB1 1477 aa34.97■■■■□ 3.19
PCM1-209ENST00000518930 L3MBTL2Q969R5 705 aa34.96■■■■□ 3.19
PCM1-209ENST00000518930 PIK3C2GO75747 1445 aa34.96■■■■□ 3.19
PCM1-209ENST00000518930 SLC26A8Q96RN1 970 aa34.95■■■■□ 3.19
PCM1-209ENST00000518930 ADAMTS13Q76LX8 1427 aa34.95■■■■□ 3.19
PCM1-209ENST00000518930 LAMC1P11047 1609 aa34.93■■■■□ 3.18
PCM1-209ENST00000518930 ALKQ9UM73 1620 aa34.92■■■■□ 3.18
PCM1-209ENST00000518930 SETD1AO15047 1707 aaKnown RBP34.89■■■■□ 3.18
PCM1-209ENST00000518930 TBX22Q9Y458 520 aa34.88■■■■□ 3.17
PCM1-209ENST00000518930 PRAG1Q86YV5 1406 aa34.84■■■■□ 3.17
PCM1-209ENST00000518930 TIMELESSQ9UNS1 1208 aa34.82■■■■□ 3.16
PCM1-209ENST00000518930 PIK3R4Q99570 1358 aa34.82■■■■□ 3.16
PCM1-209ENST00000518930 CHD2O14647 1828 aaKnown RBP34.81■■■■□ 3.16
PCM1-209ENST00000518930 ZNF335Q9H4Z2 1342 aaPredicted RBP34.81■■■■□ 3.16
PCM1-209ENST00000518930 KIAA1210Q9ULL0 1709 aa34.8■■■■□ 3.16
PCM1-209ENST00000518930 NWD1Q149M9 1564 aa34.79■■■■□ 3.16
PCM1-209ENST00000518930 METP08581 1390 aa34.77■■■■□ 3.16
PCM1-209ENST00000518930 C14orf93Q9H972 538 aaKnown RBP34.77■■■■□ 3.16
PCM1-209ENST00000518930 CFAP70Q5T0N1 1121 aa34.76■■■■□ 3.16
PCM1-209ENST00000518930 STRCP1A6NGW2 1772 aa34.76■■■■□ 3.15
PCM1-209ENST00000518930 ASXL1Q8IXJ9 1541 aa34.74■■■■□ 3.15
PCM1-209ENST00000518930 CPS1P31327 1500 aa34.73■■■■□ 3.15
PCM1-209ENST00000518930 XRN1Q8IZH2 1706 aaKnown RBP34.72■■■■□ 3.15
PCM1-209ENST00000518930 KCNA6P17658 529 aa34.72■■■■□ 3.15
PCM1-209ENST00000518930 TRPM1Q7Z4N2 1603 aa34.72■■■■□ 3.15
PCM1-209ENST00000518930 NKTRP30414 1462 aaKnown RBP34.71■■■■□ 3.15
PCM1-209ENST00000518930 LTBP4Q8N2S1 1624 aa34.7■■■■□ 3.15
PCM1-209ENST00000518930 PTPRUQ92729 1446 aa34.7■■■■□ 3.15
PCM1-209ENST00000518930 ADGRB1O14514 1584 aa34.67■■■■□ 3.14
PCM1-209ENST00000518930 TMEM132EQ6IEE7 984 aa34.66■■■■□ 3.14
PCM1-209ENST00000518930 AMOTL2Q9Y2J4 779 aa34.66■■■■□ 3.14
PCM1-209ENST00000518930 KNDC1Q76NI1 1749 aa34.66■■■■□ 3.14
PCM1-209ENST00000518930 YTHDC2Q9H6S0 1430 aaKnown RBP34.64■■■■□ 3.14
PCM1-209ENST00000518930 LRPPRCP42704 1394 aaKnown RBP34.63■■■■□ 3.13
PCM1-209ENST00000518930 NBPF8Q3BBV2 869 aa34.63■■■■□ 3.13
PCM1-209ENST00000518930 RALGAPBQ86X10 1494 aa34.61■■■■□ 3.13
PCM1-209ENST00000518930 ROCK2O75116 1388 aaKnown RBP34.6■■■■□ 3.13
PCM1-209ENST00000518930 PTCH1Q13635 1447 aa34.59■■■■□ 3.13
PCM1-209ENST00000518930 STK26Q9P289 416 aa34.59■■■■□ 3.13
PCM1-209ENST00000518930 LRRC7Q96NW7 1537 aa34.58■■■■□ 3.13
PCM1-209ENST00000518930 TECPR2O15040 1411 aa34.57■■■■□ 3.13
PCM1-209ENST00000518930 NBPF1Q3BBV0 1214 aa34.56■■■■□ 3.12
PCM1-209ENST00000518930 ABCC11Q96J66 1382 aa34.56■■■■□ 3.12
PCM1-209ENST00000518930 PROSER2Q86WR7 435 aaPredicted RBP34.55■■■■□ 3.12
PCM1-209ENST00000518930 DLC1Q96QB1 1528 aa34.53■■■■□ 3.12
PCM1-209ENST00000518930 ROBO2Q9HCK4 1378 aa34.51■■■■□ 3.12
PCM1-209ENST00000518930 XIRP1Q702N8 1843 aaKnown RBP34.51■■■■□ 3.12
PCM1-209ENST00000518930 TMEM94Q12767 1356 aa34.5■■■■□ 3.11
PCM1-209ENST00000518930 ARHGEF28Q8N1W1 1705 aaKnown RBP34.5■■■■□ 3.11
PCM1-209ENST00000518930 TRAK1Q9UPV9 953 aa34.49■■■■□ 3.11
PCM1-209ENST00000518930 GPRASP1Q5JY77 1395 aa34.49■■■■□ 3.11
PCM1-209ENST00000518930 IQSEC2Q5JU85 1478 aa34.47■■■■□ 3.11
PCM1-209ENST00000518930 FAM135BQ49AJ0 1406 aa34.47■■■■□ 3.11
PCM1-209ENST00000518930 CERKQ8TCT0 537 aa34.45■■■■□ 3.11
PCM1-209ENST00000518930 CARD11Q9BXL7 1154 aa34.45■■■■□ 3.11
PCM1-209ENST00000518930 NCOA3Q9Y6Q9 1424 aa34.45■■■■□ 3.11
PCM1-209ENST00000518930 C14orf37Q86TY3 774 aa34.44■■■■□ 3.1
PCM1-209ENST00000518930 RBM33Q96EV2 1170 aaKnown RBP34.44■■■■□ 3.1
PCM1-209ENST00000518930 SIRT1Q96EB6 747 aa34.43■■■■□ 3.1
PCM1-209ENST00000518930 NALCNQ8IZF0 1738 aa34.41■■■■□ 3.1
PCM1-209ENST00000518930 POGKQ9P215 609 aa34.41■■■■□ 3.1
PCM1-209ENST00000518930 EIF3AQ14152 1382 aaKnown RBP34.4■■■■□ 3.1
PCM1-209ENST00000518930 PRAM1Q96QH2 718 aa34.4■■■■□ 3.1
PCM1-209ENST00000518930 MSH6P52701 1360 aa34.38■■■■□ 3.09
PCM1-209ENST00000518930 WAPLQ7Z5K2 1190 aa34.38■■■■□ 3.09
PCM1-209ENST00000518930 ADGRL3Q9HAR2 1447 aa34.38■■■■□ 3.09
PCM1-209ENST00000518930 PLEKHH1Q9ULM0 1364 aa34.37■■■■□ 3.09
PCM1-209ENST00000518930 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms