RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
CLN8-203ENST00000518780 SLIT1O75093 1534 aa13.64□□□□□ -0.23
CLN8-203ENST00000518780 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
CLN8-203ENST00000518780 ARHGAP23Q9P227 1491 aa13.63□□□□□ -0.23
CLN8-203ENST00000518780 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
CLN8-203ENST00000518780 DCAF11Q8TEB1 546 aa13.63□□□□□ -0.23
CLN8-203ENST00000518780 L3MBTL2Q969R5 705 aa13.63□□□□□ -0.23
CLN8-203ENST00000518780 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
CLN8-203ENST00000518780 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
CLN8-203ENST00000518780 RIMS2Q9UQ26 1411 aa13.62□□□□□ -0.23
CLN8-203ENST00000518780 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
CLN8-203ENST00000518780 KIF1BO60333 1816 aa13.61□□□□□ -0.23
CLN8-203ENST00000518780 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
CLN8-203ENST00000518780 LTKP29376 864 aa13.59□□□□□ -0.23
CLN8-203ENST00000518780 MYOM2P54296 1465 aa13.59□□□□□ -0.23
CLN8-203ENST00000518780 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
CLN8-203ENST00000518780 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
CLN8-203ENST00000518780 PLEKHG1Q9ULL1 1385 aa13.58□□□□□ -0.24
CLN8-203ENST00000518780 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
CLN8-203ENST00000518780 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
CLN8-203ENST00000518780 MED14O60244 1454 aa13.56□□□□□ -0.24
CLN8-203ENST00000518780 NRXN1Q9ULB1 1477 aa13.56□□□□□ -0.24
CLN8-203ENST00000518780 HSPA2P54652 639 aa13.56□□□□□ -0.24
CLN8-203ENST00000518780 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
CLN8-203ENST00000518780 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
CLN8-203ENST00000518780 TBX22Q9Y458 520 aa13.54□□□□□ -0.24
CLN8-203ENST00000518780 BCANQ96GW7 911 aa13.53□□□□□ -0.24
CLN8-203ENST00000518780 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
CLN8-203ENST00000518780 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
CLN8-203ENST00000518780 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
CLN8-203ENST00000518780 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
CLN8-203ENST00000518780 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
CLN8-203ENST00000518780 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
CLN8-203ENST00000518780 PPLO60437 1756 aa13.5□□□□□ -0.25
CLN8-203ENST00000518780 SETBP1Q9Y6X0 1596 aa13.5□□□□□ -0.25
CLN8-203ENST00000518780 ADAMTS13Q76LX8 1427 aa13.48□□□□□ -0.25
CLN8-203ENST00000518780 IFT172Q9UG01 1749 aa13.48□□□□□ -0.25
CLN8-203ENST00000518780 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
CLN8-203ENST00000518780 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
CLN8-203ENST00000518780 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
CLN8-203ENST00000518780 DIP2AQ14689 1571 aa13.47□□□□□ -0.25
CLN8-203ENST00000518780 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
CLN8-203ENST00000518780 GPRASP1Q5JY77 1395 aa13.45□□□□□ -0.26
CLN8-203ENST00000518780 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
CLN8-203ENST00000518780 ALKQ9UM73 1620 aa13.45□□□□□ -0.26
CLN8-203ENST00000518780 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
CLN8-203ENST00000518780 RALGAPBQ86X10 1494 aa13.44□□□□□ -0.26
CLN8-203ENST00000518780 LAMC1P11047 1609 aa13.44□□□□□ -0.26
CLN8-203ENST00000518780 KCNA6P17658 529 aa13.44□□□□□ -0.26
CLN8-203ENST00000518780 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
CLN8-203ENST00000518780 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
CLN8-203ENST00000518780 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
CLN8-203ENST00000518780 CARD11Q9BXL7 1154 aa13.43□□□□□ -0.26
CLN8-203ENST00000518780 KIAA1210Q9ULL0 1709 aa13.43□□□□□ -0.26
CLN8-203ENST00000518780 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
CLN8-203ENST00000518780 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
CLN8-203ENST00000518780 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
CLN8-203ENST00000518780 METP08581 1390 aa13.42□□□□□ -0.26
CLN8-203ENST00000518780 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
CLN8-203ENST00000518780 TMEM132EQ6IEE7 984 aa13.41□□□□□ -0.26
CLN8-203ENST00000518780 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
CLN8-203ENST00000518780 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
CLN8-203ENST00000518780 YTHDC2Q9H6S0 1430 aaKnown RBP13.4□□□□□ -0.26
CLN8-203ENST00000518780 ADGRB1O14514 1584 aa13.4□□□□□ -0.26
CLN8-203ENST00000518780 TECPR2O15040 1411 aa13.39□□□□□ -0.27
CLN8-203ENST00000518780 EIF3AQ14152 1382 aaKnown RBP13.39□□□□□ -0.27
CLN8-203ENST00000518780 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
CLN8-203ENST00000518780 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
CLN8-203ENST00000518780 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
CLN8-203ENST00000518780 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
CLN8-203ENST00000518780 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLN8-203ENST00000518780 STK26Q9P289 416 aa13.36□□□□□ -0.27
CLN8-203ENST00000518780 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
CLN8-203ENST00000518780 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
CLN8-203ENST00000518780 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
CLN8-203ENST00000518780 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
CLN8-203ENST00000518780 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
CLN8-203ENST00000518780 SETD1AO15047 1707 aaKnown RBP13.34□□□□□ -0.27
CLN8-203ENST00000518780 POGKQ9P215 609 aa13.34□□□□□ -0.27
CLN8-203ENST00000518780 USP47Q96K76 1375 aa13.33□□□□□ -0.27
CLN8-203ENST00000518780 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
CLN8-203ENST00000518780 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
CLN8-203ENST00000518780 CENPJQ9HC77 1338 aaPredicted RBP13.33□□□□□ -0.28
CLN8-203ENST00000518780 CPS1P31327 1500 aa13.33□□□□□ -0.28
CLN8-203ENST00000518780 NWD1Q149M9 1564 aa13.32□□□□□ -0.28
CLN8-203ENST00000518780 PRAM1Q96QH2 718 aa13.32□□□□□ -0.28
CLN8-203ENST00000518780 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
CLN8-203ENST00000518780 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
CLN8-203ENST00000518780 ST20-MTHFSA0A0A6YYL1 179 aa13.3□□□□□ -0.28
CLN8-203ENST00000518780 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
CLN8-203ENST00000518780 CHD2O14647 1828 aaKnown RBP13.29□□□□□ -0.28
CLN8-203ENST00000518780 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
CLN8-203ENST00000518780 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
CLN8-203ENST00000518780 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
CLN8-203ENST00000518780 KNDC1Q76NI1 1749 aa13.28□□□□□ -0.28
CLN8-203ENST00000518780 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
CLN8-203ENST00000518780 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
CLN8-203ENST00000518780 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
CLN8-203ENST00000518780 TESK2Q96S53 571 aa13.27□□□□□ -0.29
CLN8-203ENST00000518780 TMF1P82094 1093 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms