RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 JCADQ9P266 1359 aa19.4■□□□□ 0.7
TRAPPC9-204ENST00000518723 ZFYVE9O95405 1425 aa19.38■□□□□ 0.69
TRAPPC9-204ENST00000518723 RPRD2Q5VT52 1461 aaKnown RBP19.38■□□□□ 0.69
TRAPPC9-204ENST00000518723 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
TRAPPC9-204ENST00000518723 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
TRAPPC9-204ENST00000518723 ADGRL2O95490 1459 aa19.35■□□□□ 0.69
TRAPPC9-204ENST00000518723 NCOA3Q9Y6Q9 1424 aa19.35■□□□□ 0.69
TRAPPC9-204ENST00000518723 PHLPP1O60346 1717 aa19.35■□□□□ 0.69
TRAPPC9-204ENST00000518723 BCANQ96GW7 911 aa19.35■□□□□ 0.69
TRAPPC9-204ENST00000518723 APLP2Q06481 763 aa19.33■□□□□ 0.68
TRAPPC9-204ENST00000518723 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.68
TRAPPC9-204ENST00000518723 HDGFP51858 240 aaKnown RBP19.32■□□□□ 0.68
TRAPPC9-204ENST00000518723 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
TRAPPC9-204ENST00000518723 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC9-204ENST00000518723 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
TRAPPC9-204ENST00000518723 SPATA31A6Q5VVP1 1343 aa19.3■□□□□ 0.68
TRAPPC9-204ENST00000518723 SETD1AO15047 1707 aaKnown RBP19.29■□□□□ 0.68
TRAPPC9-204ENST00000518723 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
TRAPPC9-204ENST00000518723 PPP1R15AO75807 674 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC9-204ENST00000518723 TMEM131LA2VDJ0 1609 aa19.29■□□□□ 0.68
TRAPPC9-204ENST00000518723 LRP6O75581 1613 aa19.28■□□□□ 0.68
TRAPPC9-204ENST00000518723 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.27■□□□□ 0.68
TRAPPC9-204ENST00000518723 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC9-204ENST00000518723 ZNF772Q68DY9 489 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC9-204ENST00000518723 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
TRAPPC9-204ENST00000518723 PIK3R4Q99570 1358 aa19.26■□□□□ 0.67
TRAPPC9-204ENST00000518723 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
TRAPPC9-204ENST00000518723 GCC2Q8IWJ2 1684 aa19.25■□□□□ 0.67
TRAPPC9-204ENST00000518723 DIP2AQ14689 1571 aa19.25■□□□□ 0.67
TRAPPC9-204ENST00000518723 C19orf44Q9H6X5 657 aa19.25■□□□□ 0.67
TRAPPC9-204ENST00000518723 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
TRAPPC9-204ENST00000518723 C14orf37Q86TY3 774 aa19.23■□□□□ 0.67
TRAPPC9-204ENST00000518723 ATF3P18847 181 aa19.22■□□□□ 0.67
TRAPPC9-204ENST00000518723 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
TRAPPC9-204ENST00000518723 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
TRAPPC9-204ENST00000518723 SHPRHQ149N8 1683 aa19.21■□□□□ 0.67
TRAPPC9-204ENST00000518723 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC9-204ENST00000518723 UNC13BO14795 1591 aa19.19■□□□□ 0.66
TRAPPC9-204ENST00000518723 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
TRAPPC9-204ENST00000518723 CHGAP10645 457 aaKnown RBP19.18■□□□□ 0.66
TRAPPC9-204ENST00000518723 BRINP3Q76B58 766 aa19.18■□□□□ 0.66
TRAPPC9-204ENST00000518723 DCCP43146 1447 aa19.17■□□□□ 0.66
TRAPPC9-204ENST00000518723 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
TRAPPC9-204ENST00000518723 CDK12Q9NYV4 1490 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC9-204ENST00000518723 TRPM2O94759 1503 aa19.16■□□□□ 0.66
TRAPPC9-204ENST00000518723 RXRBP28702 533 aa19.16■□□□□ 0.66
TRAPPC9-204ENST00000518723 NUTM2DQ5VT03 806 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC9-204ENST00000518723 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
TRAPPC9-204ENST00000518723 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
TRAPPC9-204ENST00000518723 E9PCH4 1651 aa19.14■□□□□ 0.66
TRAPPC9-204ENST00000518723 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
TRAPPC9-204ENST00000518723 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
TRAPPC9-204ENST00000518723 IQGAP3Q86VI3 1631 aa19.11■□□□□ 0.65
TRAPPC9-204ENST00000518723 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
TRAPPC9-204ENST00000518723 MST1RQ04912 1400 aa19.09■□□□□ 0.65
TRAPPC9-204ENST00000518723 XRN1Q8IZH2 1706 aaKnown RBP19.09■□□□□ 0.65
TRAPPC9-204ENST00000518723 AFF2P51816 1311 aa19.09■□□□□ 0.65
TRAPPC9-204ENST00000518723 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-204ENST00000518723 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-204ENST00000518723 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-204ENST00000518723 SETBP1Q9Y6X0 1596 aa19.08■□□□□ 0.65
TRAPPC9-204ENST00000518723 LRRC59Q96AG4 307 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-204ENST00000518723 NHSL1Q5SYE7 1610 aa19.06■□□□□ 0.64
TRAPPC9-204ENST00000518723 NRXN3Q9Y4C0 1643 aa19.06■□□□□ 0.64
TRAPPC9-204ENST00000518723 NUP155O75694 1391 aa19.06■□□□□ 0.64
TRAPPC9-204ENST00000518723 SRCAPQ6ZRS2 3230 aa19.05■□□□□ 0.64
TRAPPC9-204ENST00000518723 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
TRAPPC9-204ENST00000518723 METP08581 1390 aa19.03■□□□□ 0.64
TRAPPC9-204ENST00000518723 PNPLA6Q8IY17 1366 aa19.03■□□□□ 0.64
TRAPPC9-204ENST00000518723 RGS12O14924 1447 aa19.02■□□□□ 0.64
TRAPPC9-204ENST00000518723 RBM6P78332 1123 aaKnown RBP19.02■□□□□ 0.64
TRAPPC9-204ENST00000518723 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
TRAPPC9-204ENST00000518723 C8orf37Q96NL8 207 aa19■□□□□ 0.63
TRAPPC9-204ENST00000518723 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
TRAPPC9-204ENST00000518723 DDX17Q92841 729 aaKnown RBP18.97■□□□□ 0.63
TRAPPC9-204ENST00000518723 C1orf167Q5SNV9 1468 aa18.96■□□□□ 0.63
TRAPPC9-204ENST00000518723 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
TRAPPC9-204ENST00000518723 LAMC1P11047 1609 aa18.95■□□□□ 0.62
TRAPPC9-204ENST00000518723 NALCNQ8IZF0 1738 aa18.94■□□□□ 0.62
TRAPPC9-204ENST00000518723 NGLY1Q96IV0 654 aa18.94■□□□□ 0.62
TRAPPC9-204ENST00000518723 NEXMIFQ5QGS0 1516 aa18.94■□□□□ 0.62
TRAPPC9-204ENST00000518723 PTCH1Q13635 1447 aa18.92■□□□□ 0.62
TRAPPC9-204ENST00000518723 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC9-204ENST00000518723 ADAMTS2O95450 1211 aa18.91■□□□□ 0.62
TRAPPC9-204ENST00000518723 ATAD2Q6PL18 1390 aa18.91■□□□□ 0.62
TRAPPC9-204ENST00000518723 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
TRAPPC9-204ENST00000518723 CLTCL1P53675 1640 aa18.89■□□□□ 0.62
TRAPPC9-204ENST00000518723 ITGAEP38570 1179 aa18.88■□□□□ 0.61
TRAPPC9-204ENST00000518723 FNBP4Q8N3X1 1017 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC9-204ENST00000518723 USP21Q9UK80 565 aa18.88■□□□□ 0.61
TRAPPC9-204ENST00000518723 TRPC5Q9UL62 973 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC9-204ENST00000518723 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
TRAPPC9-204ENST00000518723 ROBO2Q9HCK4 1378 aa18.87■□□□□ 0.61
TRAPPC9-204ENST00000518723 ATRNO75882 1429 aa18.85■□□□□ 0.61
TRAPPC9-204ENST00000518723 EP400Q96L91 3159 aa18.85■□□□□ 0.61
TRAPPC9-204ENST00000518723 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC9-204ENST00000518723 COL22A1Q8NFW1 1626 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC9-204ENST00000518723 FOXD1Q16676 465 aa18.83■□□□□ 0.6
TRAPPC9-204ENST00000518723 MYOM2P54296 1465 aa18.83■□□□□ 0.6
TRAPPC9-204ENST00000518723 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms