RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 MED14O60244 1454 aa33.36■■■□□ 2.93
NKX6-3-201ENST00000518699 IQGAP1P46940 1657 aa33.34■■■□□ 2.93
NKX6-3-201ENST00000518699 RPGRIP1LQ68CZ1 1315 aa33.34■■■□□ 2.93
NKX6-3-201ENST00000518699 ZNF326Q5BKZ1 582 aaKnown RBP33.33■■■□□ 2.93
NKX6-3-201ENST00000518699 ANKLE2Q86XL3 938 aa33.33■■■□□ 2.93
NKX6-3-201ENST00000518699 EID1Q9Y6B2 187 aa33.31■■■□□ 2.92
NKX6-3-201ENST00000518699 LTKP29376 864 aa33.3■■■□□ 2.92
NKX6-3-201ENST00000518699 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.3■■■□□ 2.92
NKX6-3-201ENST00000518699 SIN3AQ96ST3 1273 aa33.29■■■□□ 2.92
NKX6-3-201ENST00000518699 MYOM2P54296 1465 aa33.28■■■□□ 2.92
NKX6-3-201ENST00000518699 HDGFP51858 240 aaKnown RBP33.28■■■□□ 2.92
NKX6-3-201ENST00000518699 TXNDC2Q86VQ3 553 aa33.28■■■□□ 2.92
NKX6-3-201ENST00000518699 NCKAP5LQ9HCH0 1330 aa33.27■■■□□ 2.92
NKX6-3-201ENST00000518699 NPHP4O75161 1426 aaPredicted RBP33.27■■■□□ 2.92
NKX6-3-201ENST00000518699 PLEKHG1Q9ULL1 1385 aa33.26■■■□□ 2.91
NKX6-3-201ENST00000518699 RGL3Q3MIN7 710 aa33.25■■■□□ 2.91
NKX6-3-201ENST00000518699 CCER1Q8TC90 406 aaPredicted RBP33.25■■■□□ 2.91
NKX6-3-201ENST00000518699 SETBP1Q9Y6X0 1596 aa33.25■■■□□ 2.91
NKX6-3-201ENST00000518699 NRXN3Q9Y4C0 1643 aa33.23■■■□□ 2.91
NKX6-3-201ENST00000518699 PPP1R15AO75807 674 aaPredicted RBP33.21■■■□□ 2.91
NKX6-3-201ENST00000518699 NRXN1Q9ULB1 1477 aa33.21■■■□□ 2.91
NKX6-3-201ENST00000518699 DIP2AQ14689 1571 aa33.19■■■□□ 2.9
NKX6-3-201ENST00000518699 NEUROD1Q13562 356 aa33.19■■■□□ 2.9
NKX6-3-201ENST00000518699 VGFO15240 615 aaPredicted RBP33.18■■■□□ 2.9
NKX6-3-201ENST00000518699 NUTM2DQ5VT03 806 aaPredicted RBP33.17■■■□□ 2.9
NKX6-3-201ENST00000518699 DMRT2Q9Y5R5 561 aa33.16■■■□□ 2.9
NKX6-3-201ENST00000518699 SETD1AO15047 1707 aaKnown RBP33.15■■■□□ 2.9
NKX6-3-201ENST00000518699 PIK3C2GO75747 1445 aa33.15■■■□□ 2.9
NKX6-3-201ENST00000518699 STAC3Q96MF2 364 aa33.14■■■□□ 2.9
NKX6-3-201ENST00000518699 ADAMTS13Q76LX8 1427 aa33.13■■■□□ 2.89
NKX6-3-201ENST00000518699 LAMC1P11047 1609 aa33.13■■■□□ 2.89
NKX6-3-201ENST00000518699 TONSLQ96HA7 1378 aa33.11■■■□□ 2.89
NKX6-3-201ENST00000518699 ADGRF5Q8IZF2 1346 aa33.1■■■□□ 2.89
NKX6-3-201ENST00000518699 DCAF11Q8TEB1 546 aa33.09■■■□□ 2.89
NKX6-3-201ENST00000518699 L3MBTL2Q969R5 705 aa33.09■■■□□ 2.89
NKX6-3-201ENST00000518699 ALKQ9UM73 1620 aa33.07■■■□□ 2.89
NKX6-3-201ENST00000518699 KIAA1210Q9ULL0 1709 aa33.04■■■□□ 2.88
NKX6-3-201ENST00000518699 PRAG1Q86YV5 1406 aa33.03■■■□□ 2.88
NKX6-3-201ENST00000518699 BCANQ96GW7 911 aa33.01■■■□□ 2.88
NKX6-3-201ENST00000518699 NWD1Q149M9 1564 aa33.01■■■□□ 2.87
NKX6-3-201ENST00000518699 TIMELESSQ9UNS1 1208 aa33■■■□□ 2.87
NKX6-3-201ENST00000518699 KDM2AQ9Y2K7 1162 aa33■■■□□ 2.87
NKX6-3-201ENST00000518699 TBX22Q9Y458 520 aa33■■■□□ 2.87
NKX6-3-201ENST00000518699 CHD2O14647 1828 aaKnown RBP32.99■■■□□ 2.87
NKX6-3-201ENST00000518699 SLC26A8Q96RN1 970 aa32.99■■■□□ 2.87
NKX6-3-201ENST00000518699 PIK3R4Q99570 1358 aa32.98■■■□□ 2.87
NKX6-3-201ENST00000518699 ASXL1Q8IXJ9 1541 aa32.98■■■□□ 2.87
NKX6-3-201ENST00000518699 SENP3Q9H4L4 574 aaPredicted RBP32.96■■■□□ 2.87
NKX6-3-201ENST00000518699 STRCP1A6NGW2 1772 aa32.96■■■□□ 2.87
NKX6-3-201ENST00000518699 XRN1Q8IZH2 1706 aaKnown RBP32.95■■■□□ 2.87
NKX6-3-201ENST00000518699 TRPM1Q7Z4N2 1603 aa32.94■■■□□ 2.86
NKX6-3-201ENST00000518699 C14orf93Q9H972 538 aaKnown RBP32.92■■■□□ 2.86
NKX6-3-201ENST00000518699 ADGRB1O14514 1584 aa32.92■■■□□ 2.86
NKX6-3-201ENST00000518699 METP08581 1390 aa32.91■■■□□ 2.86
NKX6-3-201ENST00000518699 LTBP4Q8N2S1 1624 aa32.89■■■□□ 2.86
NKX6-3-201ENST00000518699 KNDC1Q76NI1 1749 aa32.89■■■□□ 2.86
NKX6-3-201ENST00000518699 NKTRP30414 1462 aaKnown RBP32.88■■■□□ 2.85
NKX6-3-201ENST00000518699 ZNF335Q9H4Z2 1342 aaPredicted RBP32.87■■■□□ 2.85
NKX6-3-201ENST00000518699 PTPRUQ92729 1446 aa32.87■■■□□ 2.85
NKX6-3-201ENST00000518699 CPS1P31327 1500 aa32.87■■■□□ 2.85
NKX6-3-201ENST00000518699 CFAP70Q5T0N1 1121 aa32.86■■■□□ 2.85
NKX6-3-201ENST00000518699 RALGAPBQ86X10 1494 aa32.83■■■□□ 2.85
NKX6-3-201ENST00000518699 KCNA6P17658 529 aa32.83■■■□□ 2.85
NKX6-3-201ENST00000518699 TECPR2O15040 1411 aa32.81■■■□□ 2.84
NKX6-3-201ENST00000518699 NBPF8Q3BBV2 869 aa32.8■■■□□ 2.84
NKX6-3-201ENST00000518699 YTHDC2Q9H6S0 1430 aaKnown RBP32.8■■■□□ 2.84
NKX6-3-201ENST00000518699 LRPPRCP42704 1394 aaKnown RBP32.79■■■□□ 2.84
NKX6-3-201ENST00000518699 PTCH1Q13635 1447 aa32.79■■■□□ 2.84
NKX6-3-201ENST00000518699 DLC1Q96QB1 1528 aa32.75■■■□□ 2.83
NKX6-3-201ENST00000518699 GPRASP1Q5JY77 1395 aa32.74■■■□□ 2.83
NKX6-3-201ENST00000518699 TMEM132EQ6IEE7 984 aa32.74■■■□□ 2.83
NKX6-3-201ENST00000518699 AMOTL2Q9Y2J4 779 aa32.74■■■□□ 2.83
NKX6-3-201ENST00000518699 XIRP1Q702N8 1843 aaKnown RBP32.74■■■□□ 2.83
NKX6-3-201ENST00000518699 LRRC7Q96NW7 1537 aa32.74■■■□□ 2.83
NKX6-3-201ENST00000518699 ABCC11Q96J66 1382 aa32.73■■■□□ 2.83
NKX6-3-201ENST00000518699 ARHGEF28Q8N1W1 1705 aaKnown RBP32.73■■■□□ 2.83
NKX6-3-201ENST00000518699 ROCK2O75116 1388 aaKnown RBP32.71■■■□□ 2.83
NKX6-3-201ENST00000518699 NBPF1Q3BBV0 1214 aa32.7■■■□□ 2.82
NKX6-3-201ENST00000518699 ROBO2Q9HCK4 1378 aa32.67■■■□□ 2.82
NKX6-3-201ENST00000518699 FAM135BQ49AJ0 1406 aa32.66■■■□□ 2.82
NKX6-3-201ENST00000518699 IQSEC2Q5JU85 1478 aa32.65■■■□□ 2.82
NKX6-3-201ENST00000518699 NCOA3Q9Y6Q9 1424 aa32.64■■■□□ 2.82
NKX6-3-201ENST00000518699 NALCNQ8IZF0 1738 aa32.62■■■□□ 2.81
NKX6-3-201ENST00000518699 TMEM94Q12767 1356 aa32.62■■■□□ 2.81
NKX6-3-201ENST00000518699 STK26Q9P289 416 aa32.62■■■□□ 2.81
NKX6-3-201ENST00000518699 SIRT1Q96EB6 747 aa32.61■■■□□ 2.81
NKX6-3-201ENST00000518699 PROSER2Q86WR7 435 aaPredicted RBP32.59■■■□□ 2.81
NKX6-3-201ENST00000518699 TRAK1Q9UPV9 953 aa32.57■■■□□ 2.8
NKX6-3-201ENST00000518699 ADGRL3Q9HAR2 1447 aa32.56■■■□□ 2.8
NKX6-3-201ENST00000518699 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.55■■■□□ 2.8
NKX6-3-201ENST00000518699 CARD11Q9BXL7 1154 aa32.54■■■□□ 2.8
NKX6-3-201ENST00000518699 PLEKHH1Q9ULM0 1364 aa32.54■■■□□ 2.8
NKX6-3-201ENST00000518699 QRICH2Q9H0J4 1663 aa32.53■■■□□ 2.8
NKX6-3-201ENST00000518699 ADGRB2O60241 1585 aa32.53■■■□□ 2.8
NKX6-3-201ENST00000518699 EIF3AQ14152 1382 aaKnown RBP32.52■■■□□ 2.8
NKX6-3-201ENST00000518699 CDC42BPGQ6DT37 1551 aa32.51■■■□□ 2.79
NKX6-3-201ENST00000518699 CERKQ8TCT0 537 aa32.51■■■□□ 2.79
NKX6-3-201ENST00000518699 PRAM1Q96QH2 718 aa32.5■■■□□ 2.79
NKX6-3-201ENST00000518699 DCCP43146 1447 aa32.5■■■□□ 2.79
NKX6-3-201ENST00000518699 RBM33Q96EV2 1170 aaKnown RBP32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms