RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 NOS1P29475 1434 aa18.4■□□□□ 0.54
TMEM55A-202ENST00000518359 SLC52A1Q9NWF4 448 aa18.4■□□□□ 0.54
TMEM55A-202ENST00000518359 COL16A1Q07092 1604 aaPredicted RBP18.4■□□□□ 0.54
TMEM55A-202ENST00000518359 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
TMEM55A-202ENST00000518359 MYO5BQ9ULV0 1848 aa18.39■□□□□ 0.54
TMEM55A-202ENST00000518359 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
TMEM55A-202ENST00000518359 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
TMEM55A-202ENST00000518359 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
TMEM55A-202ENST00000518359 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
TMEM55A-202ENST00000518359 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
TMEM55A-202ENST00000518359 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
TMEM55A-202ENST00000518359 SHPRHQ149N8 1683 aa18.34■□□□□ 0.53
TMEM55A-202ENST00000518359 NCOA3Q9Y6Q9 1424 aa18.34■□□□□ 0.53
TMEM55A-202ENST00000518359 PPP1R15AO75807 674 aaPredicted RBP18.34■□□□□ 0.53
TMEM55A-202ENST00000518359 ZFYVE9O95405 1425 aa18.33■□□□□ 0.53
TMEM55A-202ENST00000518359 APLP2Q06481 763 aa18.33■□□□□ 0.52
TMEM55A-202ENST00000518359 MEX3CQ5U5Q3 659 aaKnown RBP18.33■□□□□ 0.52
TMEM55A-202ENST00000518359 ZNF772Q68DY9 489 aaPredicted RBP18.33■□□□□ 0.52
TMEM55A-202ENST00000518359 CHIC2Q9UKJ5 165 aa18.32■□□□□ 0.52
TMEM55A-202ENST00000518359 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
TMEM55A-202ENST00000518359 LRP6O75581 1613 aa18.31■□□□□ 0.52
TMEM55A-202ENST00000518359 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
TMEM55A-202ENST00000518359 C14orf37Q86TY3 774 aa18.31■□□□□ 0.52
TMEM55A-202ENST00000518359 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
TMEM55A-202ENST00000518359 RIMS2Q9UQ26 1411 aa18.31■□□□□ 0.52
TMEM55A-202ENST00000518359 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
TMEM55A-202ENST00000518359 ADGRL2O95490 1459 aa18.29■□□□□ 0.52
TMEM55A-202ENST00000518359 CADPS2Q86UW7 1296 aa18.28■□□□□ 0.52
TMEM55A-202ENST00000518359 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
TMEM55A-202ENST00000518359 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMEM55A-202ENST00000518359 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMEM55A-202ENST00000518359 ATF3P18847 181 aa18.26■□□□□ 0.51
TMEM55A-202ENST00000518359 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
TMEM55A-202ENST00000518359 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
TMEM55A-202ENST00000518359 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
TMEM55A-202ENST00000518359 C19orf44Q9H6X5 657 aa18.24■□□□□ 0.51
TMEM55A-202ENST00000518359 TRPM2O94759 1503 aa18.23■□□□□ 0.51
TMEM55A-202ENST00000518359 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
TMEM55A-202ENST00000518359 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
TMEM55A-202ENST00000518359 RXRBP28702 533 aa18.22■□□□□ 0.51
TMEM55A-202ENST00000518359 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
TMEM55A-202ENST00000518359 UNC13BO14795 1591 aa18.21■□□□□ 0.51
TMEM55A-202ENST00000518359 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
TMEM55A-202ENST00000518359 E9PCH4 1651 aa18.21■□□□□ 0.51
TMEM55A-202ENST00000518359 DCCP43146 1447 aa18.19■□□□□ 0.5
TMEM55A-202ENST00000518359 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
TMEM55A-202ENST00000518359 NUTM2BA6NNL0 878 aaPredicted RBP18.17■□□□□ 0.5
TMEM55A-202ENST00000518359 NUTM2EB1AL46 878 aaPredicted RBP18.17■□□□□ 0.5
TMEM55A-202ENST00000518359 NUTM2AQ8IVF1 878 aaPredicted RBP18.17■□□□□ 0.5
TMEM55A-202ENST00000518359 ASXL1Q8IXJ9 1541 aa18.17■□□□□ 0.5
TMEM55A-202ENST00000518359 FAM50AQ14320 339 aaKnown RBP18.16■□□□□ 0.5
TMEM55A-202ENST00000518359 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
TMEM55A-202ENST00000518359 NUTM2DQ5VT03 806 aaPredicted RBP18.15■□□□□ 0.5
TMEM55A-202ENST00000518359 AFF2P51816 1311 aa18.15■□□□□ 0.5
TMEM55A-202ENST00000518359 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
TMEM55A-202ENST00000518359 SETD5Q9C0A6 1442 aa18.15■□□□□ 0.5
TMEM55A-202ENST00000518359 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
TMEM55A-202ENST00000518359 XRN1Q8IZH2 1706 aaKnown RBP18.14■□□□□ 0.49
TMEM55A-202ENST00000518359 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
TMEM55A-202ENST00000518359 PTPRUQ92729 1446 aa18.11■□□□□ 0.49
TMEM55A-202ENST00000518359 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
TMEM55A-202ENST00000518359 SETBP1Q9Y6X0 1596 aa18.1■□□□□ 0.49
TMEM55A-202ENST00000518359 MST1RQ04912 1400 aa18.1■□□□□ 0.49
TMEM55A-202ENST00000518359 RGS12O14924 1447 aa18.08■□□□□ 0.49
TMEM55A-202ENST00000518359 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
TMEM55A-202ENST00000518359 C8orf37Q96NL8 207 aa18.07■□□□□ 0.48
TMEM55A-202ENST00000518359 SPHKAPQ2M3C7 1700 aa18.06■□□□□ 0.48
TMEM55A-202ENST00000518359 QTRT2Q9H974 415 aaKnown RBP18.06■□□□□ 0.48
TMEM55A-202ENST00000518359 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
TMEM55A-202ENST00000518359 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
TMEM55A-202ENST00000518359 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
TMEM55A-202ENST00000518359 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
TMEM55A-202ENST00000518359 NGLY1Q96IV0 654 aa18.03■□□□□ 0.48
TMEM55A-202ENST00000518359 NUP155O75694 1391 aa18.03■□□□□ 0.48
TMEM55A-202ENST00000518359 FOXD1Q16676 465 aa18.02■□□□□ 0.48
TMEM55A-202ENST00000518359 ATAD2Q6PL18 1390 aa18.02■□□□□ 0.47
TMEM55A-202ENST00000518359 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
TMEM55A-202ENST00000518359 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
TMEM55A-202ENST00000518359 LAMC1P11047 1609 aa18.01■□□□□ 0.47
TMEM55A-202ENST00000518359 METP08581 1390 aa17.99■□□□□ 0.47
TMEM55A-202ENST00000518359 ADAMTS2O95450 1211 aa17.97■□□□□ 0.47
TMEM55A-202ENST00000518359 DDX17Q92841 729 aaKnown RBP17.97■□□□□ 0.47
TMEM55A-202ENST00000518359 KIF1BO60333 1816 aa17.97■□□□□ 0.47
TMEM55A-202ENST00000518359 C1orf167Q5SNV9 1468 aa17.96■□□□□ 0.47
TMEM55A-202ENST00000518359 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
TMEM55A-202ENST00000518359 TRPC5Q9UL62 973 aaPredicted RBP17.95■□□□□ 0.46
TMEM55A-202ENST00000518359 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
TMEM55A-202ENST00000518359 USP21Q9UK80 565 aa17.94■□□□□ 0.46
TMEM55A-202ENST00000518359 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
TMEM55A-202ENST00000518359 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
TMEM55A-202ENST00000518359 EP400Q96L91 3159 aa17.92■□□□□ 0.46
TMEM55A-202ENST00000518359 CLTCL1P53675 1640 aa17.92■□□□□ 0.46
TMEM55A-202ENST00000518359 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
TMEM55A-202ENST00000518359 MARF1Q9Y4F3 1742 aaKnown RBP17.92■□□□□ 0.46
TMEM55A-202ENST00000518359 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
TMEM55A-202ENST00000518359 ATRNO75882 1429 aa17.89■□□□□ 0.45
TMEM55A-202ENST00000518359 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
TMEM55A-202ENST00000518359 ITGAEP38570 1179 aa17.87■□□□□ 0.45
TMEM55A-202ENST00000518359 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
TMEM55A-202ENST00000518359 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms