RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 E9PCH4 1651 aa16.37■□□□□ 0.21
FAM3B-206ENST00000518236 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
FAM3B-206ENST00000518236 GCC2Q8IWJ2 1684 aa16.36■□□□□ 0.21
FAM3B-206ENST00000518236 ZFYVE9O95405 1425 aa16.36■□□□□ 0.21
FAM3B-206ENST00000518236 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
FAM3B-206ENST00000518236 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
FAM3B-206ENST00000518236 SLC26A8Q96RN1 970 aa16.34■□□□□ 0.21
FAM3B-206ENST00000518236 TMEM131LA2VDJ0 1609 aa16.33■□□□□ 0.2
FAM3B-206ENST00000518236 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
FAM3B-206ENST00000518236 TOM1O60784 492 aa16.32■□□□□ 0.2
FAM3B-206ENST00000518236 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
FAM3B-206ENST00000518236 CHGAP10645 457 aaKnown RBP16.31■□□□□ 0.2
FAM3B-206ENST00000518236 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
FAM3B-206ENST00000518236 KCNA6P17658 529 aa16.3■□□□□ 0.2
FAM3B-206ENST00000518236 PLEKHG1Q9ULL1 1385 aa16.29■□□□□ 0.2
FAM3B-206ENST00000518236 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
FAM3B-206ENST00000518236 NUTM2DQ5VT03 806 aaPredicted RBP16.28■□□□□ 0.2
FAM3B-206ENST00000518236 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
FAM3B-206ENST00000518236 MYO5BQ9ULV0 1848 aa16.26■□□□□ 0.19
FAM3B-206ENST00000518236 HSPA1LP34931 641 aa16.26■□□□□ 0.19
FAM3B-206ENST00000518236 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
FAM3B-206ENST00000518236 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
FAM3B-206ENST00000518236 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
FAM3B-206ENST00000518236 BCANQ96GW7 911 aa16.25■□□□□ 0.19
FAM3B-206ENST00000518236 TBX22Q9Y458 520 aa16.25■□□□□ 0.19
FAM3B-206ENST00000518236 TMEM94Q12767 1356 aa16.25■□□□□ 0.19
FAM3B-206ENST00000518236 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
FAM3B-206ENST00000518236 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
FAM3B-206ENST00000518236 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
FAM3B-206ENST00000518236 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
FAM3B-206ENST00000518236 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
FAM3B-206ENST00000518236 NWD1Q149M9 1564 aa16.21■□□□□ 0.18
FAM3B-206ENST00000518236 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.18
FAM3B-206ENST00000518236 SPHKAPQ2M3C7 1700 aa16.2■□□□□ 0.18
FAM3B-206ENST00000518236 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
FAM3B-206ENST00000518236 TRPM2O94759 1503 aa16.19■□□□□ 0.18
FAM3B-206ENST00000518236 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
FAM3B-206ENST00000518236 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
FAM3B-206ENST00000518236 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
FAM3B-206ENST00000518236 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
FAM3B-206ENST00000518236 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
FAM3B-206ENST00000518236 PTPRUQ92729 1446 aa16.16■□□□□ 0.18
FAM3B-206ENST00000518236 SOCS7O14512 581 aa16.15■□□□□ 0.18
FAM3B-206ENST00000518236 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
FAM3B-206ENST00000518236 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
FAM3B-206ENST00000518236 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
FAM3B-206ENST00000518236 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
FAM3B-206ENST00000518236 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
FAM3B-206ENST00000518236 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
FAM3B-206ENST00000518236 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
FAM3B-206ENST00000518236 METP08581 1390 aa16.13■□□□□ 0.17
FAM3B-206ENST00000518236 NRXN3Q9Y4C0 1643 aa16.12■□□□□ 0.17
FAM3B-206ENST00000518236 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
FAM3B-206ENST00000518236 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
FAM3B-206ENST00000518236 MSH6P52701 1360 aa16.1■□□□□ 0.17
FAM3B-206ENST00000518236 SLAIN2Q9P270 581 aa16.09■□□□□ 0.17
FAM3B-206ENST00000518236 RPGRIP1LQ68CZ1 1315 aa16.08■□□□□ 0.16
FAM3B-206ENST00000518236 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
FAM3B-206ENST00000518236 C19orf44Q9H6X5 657 aa16.07■□□□□ 0.16
FAM3B-206ENST00000518236 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
FAM3B-206ENST00000518236 RAB3GAP2Q9H2M9 1393 aa16.06■□□□□ 0.16
FAM3B-206ENST00000518236 SPATA31E1Q6ZUB1 1445 aa16.05■□□□□ 0.16
FAM3B-206ENST00000518236 KIF1BO60333 1816 aa16.05■□□□□ 0.16
FAM3B-206ENST00000518236 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
FAM3B-206ENST00000518236 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
FAM3B-206ENST00000518236 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
FAM3B-206ENST00000518236 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
FAM3B-206ENST00000518236 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
FAM3B-206ENST00000518236 RGL3Q3MIN7 710 aa16.02■□□□□ 0.16
FAM3B-206ENST00000518236 CADPS2Q86UW7 1296 aa16.02■□□□□ 0.16
FAM3B-206ENST00000518236 ATF3P18847 181 aa16■□□□□ 0.15
FAM3B-206ENST00000518236 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.99■□□□□ 0.15
FAM3B-206ENST00000518236 SETD1AO15047 1707 aaKnown RBP15.98■□□□□ 0.15
FAM3B-206ENST00000518236 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
FAM3B-206ENST00000518236 PPLO60437 1756 aa15.98■□□□□ 0.15
FAM3B-206ENST00000518236 DCCP43146 1447 aa15.97■□□□□ 0.15
FAM3B-206ENST00000518236 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
FAM3B-206ENST00000518236 HRCP23327 699 aa15.97■□□□□ 0.15
FAM3B-206ENST00000518236 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
FAM3B-206ENST00000518236 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
FAM3B-206ENST00000518236 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.15
FAM3B-206ENST00000518236 MST1RQ04912 1400 aa15.95■□□□□ 0.14
FAM3B-206ENST00000518236 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
FAM3B-206ENST00000518236 ADGRL3Q9HAR2 1447 aa15.95■□□□□ 0.14
FAM3B-206ENST00000518236 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
FAM3B-206ENST00000518236 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
FAM3B-206ENST00000518236 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
FAM3B-206ENST00000518236 JCADQ9P266 1359 aa15.91■□□□□ 0.14
FAM3B-206ENST00000518236 TMEM132EQ6IEE7 984 aa15.91■□□□□ 0.14
FAM3B-206ENST00000518236 ASXL1Q8IXJ9 1541 aa15.9■□□□□ 0.14
FAM3B-206ENST00000518236 C14orf93Q9H972 538 aaKnown RBP15.9■□□□□ 0.14
FAM3B-206ENST00000518236 IFT172Q9UG01 1749 aa15.9■□□□□ 0.14
FAM3B-206ENST00000518236 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
FAM3B-206ENST00000518236 AHDC1Q5TGY3 1603 aaPredicted RBP15.9■□□□□ 0.14
FAM3B-206ENST00000518236 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
FAM3B-206ENST00000518236 STK26Q9P289 416 aa15.89■□□□□ 0.13
FAM3B-206ENST00000518236 ABCC11Q96J66 1382 aa15.88■□□□□ 0.13
FAM3B-206ENST00000518236 NALCNQ8IZF0 1738 aa15.88■□□□□ 0.13
FAM3B-206ENST00000518236 TECPR2O15040 1411 aa15.88■□□□□ 0.13
FAM3B-206ENST00000518236 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms