RNA–Protein interactions for RNA: ENST00000518038.1

VPS37A-203, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-203ENST00000518038 NUTM2DQ5VT03 806 aaPredicted RBP27.24■■□□□ 1.95
VPS37A-203ENST00000518038 ZFYVE9O95405 1425 aa27.24■■□□□ 1.95
VPS37A-203ENST00000518038 RBM33Q96EV2 1170 aaKnown RBP27.23■■□□□ 1.95
VPS37A-203ENST00000518038 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
VPS37A-203ENST00000518038 KCNA6P17658 529 aa27.22■■□□□ 1.95
VPS37A-203ENST00000518038 TMEM131LA2VDJ0 1609 aa27.22■■□□□ 1.95
VPS37A-203ENST00000518038 ILDR2Q71H61 639 aa27.21■■□□□ 1.95
VPS37A-203ENST00000518038 NAIPQ13075 1403 aa27.19■■□□□ 1.94
VPS37A-203ENST00000518038 PPP1R15AO75807 674 aaPredicted RBP27.19■■□□□ 1.94
VPS37A-203ENST00000518038 MYO5BQ9ULV0 1848 aa27.18■■□□□ 1.94
VPS37A-203ENST00000518038 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
VPS37A-203ENST00000518038 PROSER2Q86WR7 435 aaPredicted RBP27.16■■□□□ 1.94
VPS37A-203ENST00000518038 TMEM94Q12767 1356 aa27.16■■□□□ 1.94
VPS37A-203ENST00000518038 PLEKHG1Q9ULL1 1385 aa27.16■■□□□ 1.94
VPS37A-203ENST00000518038 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.13■■□□□ 1.93
VPS37A-203ENST00000518038 XIRP1Q702N8 1843 aaKnown RBP27.11■■□□□ 1.93
VPS37A-203ENST00000518038 TBX22Q9Y458 520 aa27.1■■□□□ 1.93
VPS37A-203ENST00000518038 TRIM52Q96A61 297 aa27.09■■□□□ 1.93
VPS37A-203ENST00000518038 HFM1A2PYH4 1435 aa27.07■■□□□ 1.92
VPS37A-203ENST00000518038 ADAMTS13Q76LX8 1427 aa27.07■■□□□ 1.92
VPS37A-203ENST00000518038 NWD1Q149M9 1564 aa27.03■■□□□ 1.92
VPS37A-203ENST00000518038 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
VPS37A-203ENST00000518038 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
VPS37A-203ENST00000518038 SPHKAPQ2M3C7 1700 aa27■■□□□ 1.91
VPS37A-203ENST00000518038 SLC4A1APQ9BWU0 796 aaKnown RBP26.98■■□□□ 1.91
VPS37A-203ENST00000518038 CHD2O14647 1828 aaKnown RBP26.96■■□□□ 1.91
VPS37A-203ENST00000518038 FAM135BQ49AJ0 1406 aa26.96■■□□□ 1.91
VPS37A-203ENST00000518038 CLTCL1P53675 1640 aa26.95■■□□□ 1.91
VPS37A-203ENST00000518038 FOXD1Q16676 465 aa26.95■■□□□ 1.9
VPS37A-203ENST00000518038 AMOTL2Q9Y2J4 779 aa26.95■■□□□ 1.9
VPS37A-203ENST00000518038 PTPRUQ92729 1446 aa26.95■■□□□ 1.9
VPS37A-203ENST00000518038 MSH6P52701 1360 aa26.94■■□□□ 1.9
VPS37A-203ENST00000518038 MED1Q15648 1581 aaPredicted RBP26.93■■□□□ 1.9
VPS37A-203ENST00000518038 SLAIN2Q9P270 581 aa26.93■■□□□ 1.9
VPS37A-203ENST00000518038 TRPM2O94759 1503 aa26.93■■□□□ 1.9
VPS37A-203ENST00000518038 PIK3R4Q99570 1358 aa26.91■■□□□ 1.9
VPS37A-203ENST00000518038 C14orf37Q86TY3 774 aa26.89■■□□□ 1.9
VPS37A-203ENST00000518038 DIP2AQ14689 1571 aa26.88■■□□□ 1.89
VPS37A-203ENST00000518038 METP08581 1390 aa26.88■■□□□ 1.89
VPS37A-203ENST00000518038 SOCS7O14512 581 aa26.88■■□□□ 1.89
VPS37A-203ENST00000518038 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
VPS37A-203ENST00000518038 NEXMIFQ5QGS0 1516 aa26.86■■□□□ 1.89
VPS37A-203ENST00000518038 SETBP1Q9Y6X0 1596 aa26.84■■□□□ 1.89
VPS37A-203ENST00000518038 NCOA3Q9Y6Q9 1424 aa26.84■■□□□ 1.89
VPS37A-203ENST00000518038 MPHOSPH9Q99550 1183 aa26.84■■□□□ 1.89
VPS37A-203ENST00000518038 C19orf44Q9H6X5 657 aa26.84■■□□□ 1.89
VPS37A-203ENST00000518038 ROBO1Q9Y6N7 1651 aa26.84■■□□□ 1.89
VPS37A-203ENST00000518038 PHF23Q9BUL5 403 aaPredicted RBP26.8■■□□□ 1.88
VPS37A-203ENST00000518038 ATF3P18847 181 aa26.79■■□□□ 1.88
VPS37A-203ENST00000518038 VGFO15240 615 aaPredicted RBP26.78■■□□□ 1.88
VPS37A-203ENST00000518038 CADPS2Q86UW7 1296 aa26.78■■□□□ 1.88
VPS37A-203ENST00000518038 KIF1BO60333 1816 aa26.77■■□□□ 1.88
VPS37A-203ENST00000518038 RPGRIP1LQ68CZ1 1315 aa26.76■■□□□ 1.87
VPS37A-203ENST00000518038 RGS17Q9UGC6 210 aaPredicted RBP26.75■■□□□ 1.87
VPS37A-203ENST00000518038 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.75■■□□□ 1.87
VPS37A-203ENST00000518038 XRN1Q8IZH2 1706 aaKnown RBP26.74■■□□□ 1.87
VPS37A-203ENST00000518038 RGL3Q3MIN7 710 aa26.74■■□□□ 1.87
VPS37A-203ENST00000518038 SETD5Q9C0A6 1442 aa26.73■■□□□ 1.87
VPS37A-203ENST00000518038 CCDC144AA2RUR9 1427 aa26.69■■□□□ 1.86
VPS37A-203ENST00000518038 ADGRF5Q8IZF2 1346 aa26.68■■□□□ 1.86
VPS37A-203ENST00000518038 BRINP3Q76B58 766 aa26.68■■□□□ 1.86
VPS37A-203ENST00000518038 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
VPS37A-203ENST00000518038 PHLPP1O60346 1717 aa26.66■■□□□ 1.86
VPS37A-203ENST00000518038 ROBO2Q9HCK4 1378 aa26.66■■□□□ 1.86
VPS37A-203ENST00000518038 RAB3GAP2Q9H2M9 1393 aa26.64■■□□□ 1.86
VPS37A-203ENST00000518038 JCADQ9P266 1359 aa26.63■■□□□ 1.85
VPS37A-203ENST00000518038 DCCP43146 1447 aa26.63■■□□□ 1.85
VPS37A-203ENST00000518038 MST1RQ04912 1400 aa26.63■■□□□ 1.85
VPS37A-203ENST00000518038 PPLO60437 1756 aa26.62■■□□□ 1.85
VPS37A-203ENST00000518038 COL16A1Q07092 1604 aaPredicted RBP26.61■■□□□ 1.85
VPS37A-203ENST00000518038 ADGRL3Q9HAR2 1447 aa26.61■■□□□ 1.85
VPS37A-203ENST00000518038 SETD1AO15047 1707 aaKnown RBP26.61■■□□□ 1.85
VPS37A-203ENST00000518038 DDX17Q92841 729 aaKnown RBP26.59■■□□□ 1.85
VPS37A-203ENST00000518038 POTEAQ6S8J7 498 aa26.58■■□□□ 1.85
VPS37A-203ENST00000518038 AHDC1Q5TGY3 1603 aaPredicted RBP26.57■■□□□ 1.84
VPS37A-203ENST00000518038 TMEM132EQ6IEE7 984 aa26.56■■□□□ 1.84
VPS37A-203ENST00000518038 STK26Q9P289 416 aa26.56■■□□□ 1.84
VPS37A-203ENST00000518038 ACIN1Q9UKV3 1341 aaKnown RBP26.56■■□□□ 1.84
VPS37A-203ENST00000518038 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
VPS37A-203ENST00000518038 ANKRD30BQ9BXX2 1392 aa26.55■■□□□ 1.84
VPS37A-203ENST00000518038 ASXL1Q8IXJ9 1541 aa26.55■■□□□ 1.84
VPS37A-203ENST00000518038 NALCNQ8IZF0 1738 aa26.54■■□□□ 1.84
VPS37A-203ENST00000518038 PRAG1Q86YV5 1406 aa26.51■■□□□ 1.83
VPS37A-203ENST00000518038 WAPLQ7Z5K2 1190 aa26.51■■□□□ 1.83
VPS37A-203ENST00000518038 ORAI2Q96SN7 254 aa26.51■■□□□ 1.83
VPS37A-203ENST00000518038 LRP6O75581 1613 aa26.5■■□□□ 1.83
VPS37A-203ENST00000518038 C1orf167Q5SNV9 1468 aa26.5■■□□□ 1.83
VPS37A-203ENST00000518038 SPATA31A6Q5VVP1 1343 aa26.5■■□□□ 1.83
VPS37A-203ENST00000518038 NUTM2BA6NNL0 878 aaPredicted RBP26.48■■□□□ 1.83
VPS37A-203ENST00000518038 NUTM2EB1AL46 878 aaPredicted RBP26.48■■□□□ 1.83
VPS37A-203ENST00000518038 NUTM2AQ8IVF1 878 aaPredicted RBP26.48■■□□□ 1.83
VPS37A-203ENST00000518038 PIK3C2GO75747 1445 aa26.48■■□□□ 1.83
VPS37A-203ENST00000518038 IFT172Q9UG01 1749 aa26.47■■□□□ 1.83
VPS37A-203ENST00000518038 LRPPRCP42704 1394 aaKnown RBP26.46■■□□□ 1.83
VPS37A-203ENST00000518038 CFAP70Q5T0N1 1121 aa26.45■■□□□ 1.82
VPS37A-203ENST00000518038 C14orf93Q9H972 538 aaKnown RBP26.45■■□□□ 1.82
VPS37A-203ENST00000518038 PLEKHH1Q9ULM0 1364 aa26.45■■□□□ 1.82
VPS37A-203ENST00000518038 MEX3CQ5U5Q3 659 aaKnown RBP26.44■■□□□ 1.82
VPS37A-203ENST00000518038 LRRC59Q96AG4 307 aaKnown RBP26.44■■□□□ 1.82
VPS37A-203ENST00000518038 ABCC11Q96J66 1382 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms