RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 PROSER2Q86WR7 435 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-203ENST00000517534 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-203ENST00000517534 KDM5AP29375 1690 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-203ENST00000517534 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-203ENST00000517534 ZFYVE9O95405 1425 aa12.92□□□□□ -0.34
CTNNA1-203ENST00000517534 ADGRB3O60242 1522 aa12.92□□□□□ -0.34
CTNNA1-203ENST00000517534 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-203ENST00000517534 BCANQ96GW7 911 aa12.9□□□□□ -0.34
CTNNA1-203ENST00000517534 PLEKHG1Q9ULL1 1385 aa12.9□□□□□ -0.34
CTNNA1-203ENST00000517534 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
CTNNA1-203ENST00000517534 HDGFP51858 240 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-203ENST00000517534 TBX22Q9Y458 520 aa12.89□□□□□ -0.35
CTNNA1-203ENST00000517534 ROCK1Q13464 1354 aa12.88□□□□□ -0.35
CTNNA1-203ENST00000517534 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
CTNNA1-203ENST00000517534 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTNNA1-203ENST00000517534 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
CTNNA1-203ENST00000517534 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
CTNNA1-203ENST00000517534 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-203ENST00000517534 MSH6P52701 1360 aa12.85□□□□□ -0.35
CTNNA1-203ENST00000517534 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-203ENST00000517534 NUTM2DQ5VT03 806 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-203ENST00000517534 ADAMTS13Q76LX8 1427 aa12.85□□□□□ -0.35
CTNNA1-203ENST00000517534 TMEM131LA2VDJ0 1609 aa12.84□□□□□ -0.35
CTNNA1-203ENST00000517534 NUP155O75694 1391 aa12.84□□□□□ -0.35
CTNNA1-203ENST00000517534 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
CTNNA1-203ENST00000517534 UNC13BO14795 1591 aa12.83□□□□□ -0.36
CTNNA1-203ENST00000517534 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.36
CTNNA1-203ENST00000517534 MSH5O43196 834 aa12.83□□□□□ -0.36
CTNNA1-203ENST00000517534 ITGAEP38570 1179 aa12.82□□□□□ -0.36
CTNNA1-203ENST00000517534 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
CTNNA1-203ENST00000517534 ROBO1Q9Y6N7 1651 aa12.81□□□□□ -0.36
CTNNA1-203ENST00000517534 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-203ENST00000517534 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
CTNNA1-203ENST00000517534 AMOTL2Q9Y2J4 779 aa12.79□□□□□ -0.36
CTNNA1-203ENST00000517534 E9PCH4 1651 aa12.79□□□□□ -0.36
CTNNA1-203ENST00000517534 JCADQ9P266 1359 aa12.79□□□□□ -0.36
CTNNA1-203ENST00000517534 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
CTNNA1-203ENST00000517534 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
CTNNA1-203ENST00000517534 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
CTNNA1-203ENST00000517534 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
CTNNA1-203ENST00000517534 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-203ENST00000517534 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
CTNNA1-203ENST00000517534 MYO5BQ9ULV0 1848 aa12.76□□□□□ -0.37
CTNNA1-203ENST00000517534 ATF3P18847 181 aa12.75□□□□□ -0.37
CTNNA1-203ENST00000517534 DIP2AQ14689 1571 aa12.74□□□□□ -0.37
CTNNA1-203ENST00000517534 BRINP3Q76B58 766 aa12.74□□□□□ -0.37
CTNNA1-203ENST00000517534 METP08581 1390 aa12.72□□□□□ -0.37
CTNNA1-203ENST00000517534 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
CTNNA1-203ENST00000517534 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-203ENST00000517534 TRPM2O94759 1503 aa12.72□□□□□ -0.37
CTNNA1-203ENST00000517534 LRP6O75581 1613 aa12.71□□□□□ -0.37
CTNNA1-203ENST00000517534 COL16A1Q07092 1604 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-203ENST00000517534 PHLPP1O60346 1717 aa12.71□□□□□ -0.38
CTNNA1-203ENST00000517534 NAIPQ13075 1403 aa12.71□□□□□ -0.38
CTNNA1-203ENST00000517534 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-203ENST00000517534 RRBP1Q9P2E9 1410 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-203ENST00000517534 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-203ENST00000517534 NRXN3Q9Y4C0 1643 aa12.7□□□□□ -0.38
CTNNA1-203ENST00000517534 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
CTNNA1-203ENST00000517534 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-203ENST00000517534 DCCP43146 1447 aa12.69□□□□□ -0.38
CTNNA1-203ENST00000517534 MST1RQ04912 1400 aa12.68□□□□□ -0.38
CTNNA1-203ENST00000517534 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-203ENST00000517534 SETD5Q9C0A6 1442 aa12.66□□□□□ -0.38
CTNNA1-203ENST00000517534 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-203ENST00000517534 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
CTNNA1-203ENST00000517534 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-203ENST00000517534 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-203ENST00000517534 ADGRL3Q9HAR2 1447 aa12.64□□□□□ -0.39
CTNNA1-203ENST00000517534 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
CTNNA1-203ENST00000517534 CLTCL1P53675 1640 aa12.64□□□□□ -0.39
CTNNA1-203ENST00000517534 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-203ENST00000517534 SPHKAPQ2M3C7 1700 aa12.64□□□□□ -0.39
CTNNA1-203ENST00000517534 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-203ENST00000517534 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-203ENST00000517534 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-203ENST00000517534 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-203ENST00000517534 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
CTNNA1-203ENST00000517534 HFM1A2PYH4 1435 aa12.62□□□□□ -0.39
CTNNA1-203ENST00000517534 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
CTNNA1-203ENST00000517534 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-203ENST00000517534 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
CTNNA1-203ENST00000517534 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
CTNNA1-203ENST00000517534 RXRBP28702 533 aa12.61□□□□□ -0.39
CTNNA1-203ENST00000517534 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNNA1-203ENST00000517534 C1orf167Q5SNV9 1468 aa12.6□□□□□ -0.39
CTNNA1-203ENST00000517534 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
CTNNA1-203ENST00000517534 ORAI2Q96SN7 254 aa12.6□□□□□ -0.39
CTNNA1-203ENST00000517534 PTCH1Q13635 1447 aa12.6□□□□□ -0.39
CTNNA1-203ENST00000517534 AFF2P51816 1311 aa12.6□□□□□ -0.39
CTNNA1-203ENST00000517534 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
CTNNA1-203ENST00000517534 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-203ENST00000517534 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
CTNNA1-203ENST00000517534 C8orf37Q96NL8 207 aa12.57□□□□□ -0.4
CTNNA1-203ENST00000517534 NHSL1Q5SYE7 1610 aa12.56□□□□□ -0.4
CTNNA1-203ENST00000517534 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-203ENST00000517534 ADGRF5Q8IZF2 1346 aa12.56□□□□□ -0.4
CTNNA1-203ENST00000517534 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-203ENST00000517534 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-203ENST00000517534 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms