RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 LTKP29376 864 aa14.41□□□□□ -0.1
CLN8-202ENST00000517514 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
CLN8-202ENST00000517514 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
CLN8-202ENST00000517514 NRXN3Q9Y4C0 1643 aa14.4□□□□□ -0.1
CLN8-202ENST00000517514 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
CLN8-202ENST00000517514 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
CLN8-202ENST00000517514 L3MBTL2Q969R5 705 aa14.38□□□□□ -0.11
CLN8-202ENST00000517514 IQGAP1P46940 1657 aa14.38□□□□□ -0.11
CLN8-202ENST00000517514 SCAF11Q99590 1463 aaKnown RBP14.38□□□□□ -0.11
CLN8-202ENST00000517514 NRXN1Q9ULB1 1477 aa14.38□□□□□ -0.11
CLN8-202ENST00000517514 ZNF326Q5BKZ1 582 aaKnown RBP14.37□□□□□ -0.11
CLN8-202ENST00000517514 SETD1AO15047 1707 aaKnown RBP14.37□□□□□ -0.11
CLN8-202ENST00000517514 RPGRIP1LQ68CZ1 1315 aa14.37□□□□□ -0.11
CLN8-202ENST00000517514 ADGRF5Q8IZF2 1346 aa14.37□□□□□ -0.11
CLN8-202ENST00000517514 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
CLN8-202ENST00000517514 MED14O60244 1454 aa14.37□□□□□ -0.11
CLN8-202ENST00000517514 MYOM2P54296 1465 aa14.37□□□□□ -0.11
CLN8-202ENST00000517514 TXNDC2Q86VQ3 553 aa14.35□□□□□ -0.11
CLN8-202ENST00000517514 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
CLN8-202ENST00000517514 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
CLN8-202ENST00000517514 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
CLN8-202ENST00000517514 ADAMTS13Q76LX8 1427 aa14.33□□□□□ -0.11
CLN8-202ENST00000517514 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
CLN8-202ENST00000517514 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
CLN8-202ENST00000517514 KDM2AQ9Y2K7 1162 aa14.32□□□□□ -0.12
CLN8-202ENST00000517514 NPHP4O75161 1426 aaPredicted RBP14.32□□□□□ -0.12
CLN8-202ENST00000517514 NBPF8Q3BBV2 869 aa14.31□□□□□ -0.12
CLN8-202ENST00000517514 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLN8-202ENST00000517514 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
CLN8-202ENST00000517514 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
CLN8-202ENST00000517514 PRAG1Q86YV5 1406 aa14.31□□□□□ -0.12
CLN8-202ENST00000517514 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
CLN8-202ENST00000517514 ALKQ9UM73 1620 aa14.3□□□□□ -0.12
CLN8-202ENST00000517514 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
CLN8-202ENST00000517514 EID1Q9Y6B2 187 aa14.3□□□□□ -0.12
CLN8-202ENST00000517514 TRPM1Q7Z4N2 1603 aa14.3□□□□□ -0.12
CLN8-202ENST00000517514 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
CLN8-202ENST00000517514 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
CLN8-202ENST00000517514 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
CLN8-202ENST00000517514 LAMC1P11047 1609 aa14.27□□□□□ -0.12
CLN8-202ENST00000517514 DIP2AQ14689 1571 aa14.27□□□□□ -0.12
CLN8-202ENST00000517514 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.13
CLN8-202ENST00000517514 HDGFP51858 240 aaKnown RBP14.27□□□□□ -0.13
CLN8-202ENST00000517514 STAC3Q96MF2 364 aa14.27□□□□□ -0.13
CLN8-202ENST00000517514 CHD2O14647 1828 aaKnown RBP14.27□□□□□ -0.13
CLN8-202ENST00000517514 ADGRB1O14514 1584 aa14.26□□□□□ -0.13
CLN8-202ENST00000517514 CFAP70Q5T0N1 1121 aa14.26□□□□□ -0.13
CLN8-202ENST00000517514 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
CLN8-202ENST00000517514 METP08581 1390 aa14.25□□□□□ -0.13
CLN8-202ENST00000517514 C14orf93Q9H972 538 aaKnown RBP14.25□□□□□ -0.13
CLN8-202ENST00000517514 PTPRUQ92729 1446 aa14.24□□□□□ -0.13
CLN8-202ENST00000517514 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
CLN8-202ENST00000517514 XRN1Q8IZH2 1706 aaKnown RBP14.24□□□□□ -0.13
CLN8-202ENST00000517514 NBPF1Q3BBV0 1214 aa14.23□□□□□ -0.13
CLN8-202ENST00000517514 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
CLN8-202ENST00000517514 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
CLN8-202ENST00000517514 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.14
CLN8-202ENST00000517514 TMEM132EQ6IEE7 984 aa14.2□□□□□ -0.14
CLN8-202ENST00000517514 BCANQ96GW7 911 aa14.19□□□□□ -0.14
CLN8-202ENST00000517514 GPRASP1Q5JY77 1395 aa14.19□□□□□ -0.14
CLN8-202ENST00000517514 XIRP1Q702N8 1843 aaKnown RBP14.18□□□□□ -0.14
CLN8-202ENST00000517514 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
CLN8-202ENST00000517514 PIK3R4Q99570 1358 aa14.18□□□□□ -0.14
CLN8-202ENST00000517514 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
CLN8-202ENST00000517514 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
CLN8-202ENST00000517514 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
CLN8-202ENST00000517514 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
CLN8-202ENST00000517514 LRPPRCP42704 1394 aaKnown RBP14.16□□□□□ -0.14
CLN8-202ENST00000517514 TECPR2O15040 1411 aa14.15□□□□□ -0.14
CLN8-202ENST00000517514 CPS1P31327 1500 aa14.15□□□□□ -0.14
CLN8-202ENST00000517514 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
CLN8-202ENST00000517514 KCNA6P17658 529 aa14.14□□□□□ -0.15
CLN8-202ENST00000517514 AMOTL2Q9Y2J4 779 aa14.14□□□□□ -0.15
CLN8-202ENST00000517514 DLC1Q96QB1 1528 aa14.14□□□□□ -0.15
CLN8-202ENST00000517514 ROCK2O75116 1388 aaKnown RBP14.13□□□□□ -0.15
CLN8-202ENST00000517514 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
CLN8-202ENST00000517514 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.12□□□□□ -0.15
CLN8-202ENST00000517514 STK26Q9P289 416 aa14.12□□□□□ -0.15
CLN8-202ENST00000517514 NKTRP30414 1462 aaKnown RBP14.12□□□□□ -0.15
CLN8-202ENST00000517514 PLEKHH1Q9ULM0 1364 aa14.11□□□□□ -0.15
CLN8-202ENST00000517514 LRRC7Q96NW7 1537 aa14.11□□□□□ -0.15
CLN8-202ENST00000517514 PTCH1Q13635 1447 aa14.11□□□□□ -0.15
CLN8-202ENST00000517514 NALCNQ8IZF0 1738 aa14.1□□□□□ -0.15
CLN8-202ENST00000517514 TRAK1Q9UPV9 953 aa14.1□□□□□ -0.15
CLN8-202ENST00000517514 FAM135BQ49AJ0 1406 aa14.08□□□□□ -0.15
CLN8-202ENST00000517514 QRICH2Q9H0J4 1663 aa14.08□□□□□ -0.16
CLN8-202ENST00000517514 WAPLQ7Z5K2 1190 aa14.08□□□□□ -0.16
CLN8-202ENST00000517514 SIRT1Q96EB6 747 aa14.08□□□□□ -0.16
CLN8-202ENST00000517514 RBM33Q96EV2 1170 aaKnown RBP14.08□□□□□ -0.16
CLN8-202ENST00000517514 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.16
CLN8-202ENST00000517514 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
CLN8-202ENST00000517514 PRAM1Q96QH2 718 aa14.06□□□□□ -0.16
CLN8-202ENST00000517514 TMEM94Q12767 1356 aa14.05□□□□□ -0.16
CLN8-202ENST00000517514 USP47Q96K76 1375 aa14.05□□□□□ -0.16
CLN8-202ENST00000517514 PROSER2Q86WR7 435 aaPredicted RBP14.04□□□□□ -0.16
CLN8-202ENST00000517514 ADGRB2O60241 1585 aa14.04□□□□□ -0.16
CLN8-202ENST00000517514 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
CLN8-202ENST00000517514 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.16
CLN8-202ENST00000517514 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLN8-202ENST00000517514 TESK2Q96S53 571 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms