RNA–Protein interactions for RNA: ENST00000516336.1

RNU6-1225P-201, Transcript of RNA, U6 small nuclear 1225, pseudogene, humanhuman

BASIC

Gene RNU6-1225P, Length 65 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1225P-201ENST00000516336 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
RNU6-1225P-201ENST00000516336 CD46P15529 392 aa8.66□□□□□ -1.02
RNU6-1225P-201ENST00000516336 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
RNU6-1225P-201ENST00000516336 C14orf37Q86TY3 774 aa8.65□□□□□ -1.02
RNU6-1225P-201ENST00000516336 PCMTD1Q96MG8 357 aaPredicted RBP8.65□□□□□ -1.02
RNU6-1225P-201ENST00000516336 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
RNU6-1225P-201ENST00000516336 TBC1D2Q9BYX2 928 aa8.64□□□□□ -1.03
RNU6-1225P-201ENST00000516336 TK2O00142 265 aa8.63□□□□□ -1.03
RNU6-1225P-201ENST00000516336 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
RNU6-1225P-201ENST00000516336 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
RNU6-1225P-201ENST00000516336 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
RNU6-1225P-201ENST00000516336 RDH13Q8NBN7 331 aa8.63□□□□□ -1.03
RNU6-1225P-201ENST00000516336 NBPF3Q9H094 633 aa8.63□□□□□ -1.03
RNU6-1225P-201ENST00000516336 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
RNU6-1225P-201ENST00000516336 BHMG1C9JSJ3 638 aaPredicted RBP8.61□□□□□ -1.03
RNU6-1225P-201ENST00000516336 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
RNU6-1225P-201ENST00000516336 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
RNU6-1225P-201ENST00000516336 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
RNU6-1225P-201ENST00000516336 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
RNU6-1225P-201ENST00000516336 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
RNU6-1225P-201ENST00000516336 HDGFP51858 240 aaKnown RBP8.6□□□□□ -1.03
RNU6-1225P-201ENST00000516336 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
RNU6-1225P-201ENST00000516336 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
RNU6-1225P-201ENST00000516336 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
RNU6-1225P-201ENST00000516336 ADGRD1Q6QNK2 874 aa8.59□□□□□ -1.03
RNU6-1225P-201ENST00000516336 SAMD7Q7Z3H4 446 aa8.59□□□□□ -1.03
RNU6-1225P-201ENST00000516336 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
RNU6-1225P-201ENST00000516336 SLC10A3P09131 477 aa8.58□□□□□ -1.04
RNU6-1225P-201ENST00000516336 MRPL50Q8N5N7 158 aaKnown RBP8.58□□□□□ -1.04
RNU6-1225P-201ENST00000516336 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
RNU6-1225P-201ENST00000516336 ZFRQ96KR1 1074 aaKnown RBP8.57□□□□□ -1.04
RNU6-1225P-201ENST00000516336 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
RNU6-1225P-201ENST00000516336 LIMD1Q9UGP4 676 aa8.57□□□□□ -1.04
RNU6-1225P-201ENST00000516336 KDM4AO75164 1064 aa8.56□□□□□ -1.04
RNU6-1225P-201ENST00000516336 GCGRP47871 477 aa8.56□□□□□ -1.04
RNU6-1225P-201ENST00000516336 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
RNU6-1225P-201ENST00000516336 SLF2Q8IX21 1173 aa8.56□□□□□ -1.04
RNU6-1225P-201ENST00000516336 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
RNU6-1225P-201ENST00000516336 HRO43593 1189 aa8.55□□□□□ -1.04
RNU6-1225P-201ENST00000516336 RNF40O75150 1001 aa8.55□□□□□ -1.04
RNU6-1225P-201ENST00000516336 ANKRD13DQ6ZTN6 518 aa8.55□□□□□ -1.04
RNU6-1225P-201ENST00000516336 SPTLC1O15269 473 aa8.54□□□□□ -1.04
RNU6-1225P-201ENST00000516336 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
RNU6-1225P-201ENST00000516336 NDUFV2P19404 249 aa8.53□□□□□ -1.04
RNU6-1225P-201ENST00000516336 USP46P62068 366 aa8.53□□□□□ -1.04
RNU6-1225P-201ENST00000516336 STAC3Q96MF2 364 aa8.53□□□□□ -1.04
RNU6-1225P-201ENST00000516336 CFHP08603 1231 aa8.52□□□□□ -1.05
RNU6-1225P-201ENST00000516336 LRCH3Q96II8 777 aa8.52□□□□□ -1.05
RNU6-1225P-201ENST00000516336 HOXA2O43364 376 aa8.51□□□□□ -1.05
RNU6-1225P-201ENST00000516336 GJA5P36382 358 aa8.51□□□□□ -1.05
RNU6-1225P-201ENST00000516336 FLIIQ13045 1269 aa8.51□□□□□ -1.05
RNU6-1225P-201ENST00000516336 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
RNU6-1225P-201ENST00000516336 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
RNU6-1225P-201ENST00000516336 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.51□□□□□ -1.05
RNU6-1225P-201ENST00000516336 GOLGA8CPA6NN73 597 aa8.5□□□□□ -1.05
RNU6-1225P-201ENST00000516336 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
RNU6-1225P-201ENST00000516336 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
RNU6-1225P-201ENST00000516336 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
RNU6-1225P-201ENST00000516336 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
RNU6-1225P-201ENST00000516336 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
RNU6-1225P-201ENST00000516336 FDX1P10109 184 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 RFC5P40937 340 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 GUCA2AQ02747 115 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 FUT2Q10981 343 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 QPCTQ16769 361 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 KMT5BQ4FZB7 885 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 HLA-CQ95604 372 aa8.48□□□□□ -1.05
RNU6-1225P-201ENST00000516336 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
RNU6-1225P-201ENST00000516336 LILRB3O75022 631 aa8.47□□□□□ -1.05
RNU6-1225P-201ENST00000516336 NECTIN2Q92692 538 aa8.47□□□□□ -1.05
RNU6-1225P-201ENST00000516336 BCAMP50895 628 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 MCM6Q14566 821 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 WNT2BQ93097 391 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 ZMYND15Q9H091 742 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 PCDHGC3Q9UN70 934 aa8.46□□□□□ -1.06
RNU6-1225P-201ENST00000516336 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 ATP6V1AP38606 617 aa8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
RNU6-1225P-201ENST00000516336 HRCP23327 699 aa8.44□□□□□ -1.06
RNU6-1225P-201ENST00000516336 PPP4CP60510 307 aa8.44□□□□□ -1.06
RNU6-1225P-201ENST00000516336 TMEM259Q4ZIN3 620 aa8.44□□□□□ -1.06
RNU6-1225P-201ENST00000516336 RTL5Q5HYW3 569 aaPredicted RBP8.44□□□□□ -1.06
RNU6-1225P-201ENST00000516336 ACTN4O43707 911 aaKnown RBP8.43□□□□□ -1.06
RNU6-1225P-201ENST00000516336 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
RNU6-1225P-201ENST00000516336 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
RNU6-1225P-201ENST00000516336 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
RNU6-1225P-201ENST00000516336 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
RNU6-1225P-201ENST00000516336 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
RNU6-1225P-201ENST00000516336 AP1G2O75843 785 aa8.41□□□□□ -1.06
RNU6-1225P-201ENST00000516336 UBTFP17480 764 aaKnown RBP8.41□□□□□ -1.06
RNU6-1225P-201ENST00000516336 MTMR2Q13614 643 aa8.41□□□□□ -1.06
RNU6-1225P-201ENST00000516336 MORN1Q5T089 497 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms