RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 SETD1BQ9UPS6 1966 aaKnown RBP35.31■■■■□ 3.24
TUSC3-213ENST00000515859 ZFYVE9O95405 1425 aa35.3■■■■□ 3.24
TUSC3-213ENST00000515859 RALGAPBQ86X10 1494 aa35.29■■■■□ 3.24
TUSC3-213ENST00000515859 NRXN1Q9ULB1 1477 aa35.29■■■■□ 3.24
TUSC3-213ENST00000515859 MYO3AQ8NEV4 1616 aa35.29■■■■□ 3.24
TUSC3-213ENST00000515859 UBR1Q8IWV7 1749 aa35.28■■■■□ 3.24
TUSC3-213ENST00000515859 ADGRF5Q8IZF2 1346 aa35.28■■■■□ 3.24
TUSC3-213ENST00000515859 KDM4FA0A1W2PPD8 638 aa35.28■■■■□ 3.24
TUSC3-213ENST00000515859 HDGFP51858 240 aaKnown RBP35.28■■■■□ 3.24
TUSC3-213ENST00000515859 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.25■■■■□ 3.23
TUSC3-213ENST00000515859 THEMISQ8N1K5 641 aaPredicted RBP35.24■■■■□ 3.23
TUSC3-213ENST00000515859 RIMS2Q9UQ26 1411 aa35.24■■■■□ 3.23
TUSC3-213ENST00000515859 TMEM2Q9UHN6 1383 aa35.23■■■■□ 3.23
TUSC3-213ENST00000515859 TRPM1Q7Z4N2 1603 aa35.21■■■■□ 3.23
TUSC3-213ENST00000515859 CEP170BQ9Y4F5 1589 aaPredicted RBP35.21■■■■□ 3.23
TUSC3-213ENST00000515859 PIK3C2GO75747 1445 aa35.21■■■■□ 3.23
TUSC3-213ENST00000515859 ROCK2O75116 1388 aaKnown RBP35.2■■■■□ 3.23
TUSC3-213ENST00000515859 NUTM2DQ5VT03 806 aaPredicted RBP35.19■■■■□ 3.22
TUSC3-213ENST00000515859 GPRASP1Q5JY77 1395 aa35.16■■■■□ 3.22
TUSC3-213ENST00000515859 CARD11Q9BXL7 1154 aa35.16■■■■□ 3.22
TUSC3-213ENST00000515859 KIAA1210Q9ULL0 1709 aa35.16■■■■□ 3.22
TUSC3-213ENST00000515859 ZNF142P52746 1687 aaPredicted RBP35.15■■■■□ 3.22
TUSC3-213ENST00000515859 SLIT1O75093 1534 aa35.14■■■■□ 3.22
TUSC3-213ENST00000515859 NBPF1Q3BBV0 1214 aa35.14■■■■□ 3.22
TUSC3-213ENST00000515859 C14orf93Q9H972 538 aaKnown RBP35.14■■■■□ 3.22
TUSC3-213ENST00000515859 EIF4G2P78344 907 aaKnown RBP eCLIP35.13■■■■□ 3.21
TUSC3-213ENST00000515859 ARHGAP23Q9P227 1491 aa35.13■■■■□ 3.21
TUSC3-213ENST00000515859 CFAP70Q5T0N1 1121 aa35.11■■■■□ 3.21
TUSC3-213ENST00000515859 EID1Q9Y6B2 187 aa35.11■■■■□ 3.21
TUSC3-213ENST00000515859 ZNF316A6NFI3 1004 aaPredicted RBP35.09■■■■□ 3.21
TUSC3-213ENST00000515859 TXNDC2Q86VQ3 553 aa35.07■■■■□ 3.21
TUSC3-213ENST00000515859 LAMC1P11047 1609 aa35.07■■■■□ 3.2
TUSC3-213ENST00000515859 LTKP29376 864 aa35.03■■■■□ 3.2
TUSC3-213ENST00000515859 USP47Q96K76 1375 aa35.03■■■■□ 3.2
TUSC3-213ENST00000515859 SETBP1Q9Y6X0 1596 aa35.03■■■■□ 3.2
TUSC3-213ENST00000515859 HSPA5P11021 654 aaKnown RBP35.03■■■■□ 3.2
TUSC3-213ENST00000515859 PLEKHG1Q9ULL1 1385 aa35■■■■□ 3.19
TUSC3-213ENST00000515859 SCAF11Q99590 1463 aaKnown RBP34.98■■■■□ 3.19
TUSC3-213ENST00000515859 ANKLE2Q86XL3 938 aa34.97■■■■□ 3.19
TUSC3-213ENST00000515859 ALKQ9UM73 1620 aa34.96■■■■□ 3.19
TUSC3-213ENST00000515859 ADGRB1O14514 1584 aa34.95■■■■□ 3.18
TUSC3-213ENST00000515859 BCANQ96GW7 911 aa34.92■■■■□ 3.18
TUSC3-213ENST00000515859 HIRIP3Q9BW71 556 aaPredicted RBP34.92■■■■□ 3.18
TUSC3-213ENST00000515859 TMEM132EQ6IEE7 984 aa34.9■■■■□ 3.18
TUSC3-213ENST00000515859 SENP3Q9H4L4 574 aaPredicted RBP34.9■■■■□ 3.18
TUSC3-213ENST00000515859 EIF3AQ14152 1382 aaKnown RBP34.89■■■■□ 3.18
TUSC3-213ENST00000515859 NRXN3Q9Y4C0 1643 aa34.89■■■■□ 3.18
TUSC3-213ENST00000515859 ST20-MTHFSA0A0A6YYL1 179 aa34.88■■■■□ 3.17
TUSC3-213ENST00000515859 IQGAP1P46940 1657 aa34.87■■■■□ 3.17
TUSC3-213ENST00000515859 ADAMTS13Q76LX8 1427 aa34.86■■■■□ 3.17
TUSC3-213ENST00000515859 TBX22Q9Y458 520 aa34.83■■■■□ 3.17
TUSC3-213ENST00000515859 MED14O60244 1454 aa34.83■■■■□ 3.17
TUSC3-213ENST00000515859 ASXL1Q8IXJ9 1541 aa34.83■■■■□ 3.17
TUSC3-213ENST00000515859 SETD1AO15047 1707 aaKnown RBP34.82■■■■□ 3.16
TUSC3-213ENST00000515859 YTHDC2Q9H6S0 1430 aaKnown RBP34.81■■■■□ 3.16
TUSC3-213ENST00000515859 TRAK1Q9UPV9 953 aa34.8■■■■□ 3.16
TUSC3-213ENST00000515859 DIP2AQ14689 1571 aa34.79■■■■□ 3.16
TUSC3-213ENST00000515859 LMTK3Q96Q04 1460 aa34.79■■■■□ 3.16
TUSC3-213ENST00000515859 METP08581 1390 aa34.78■■■■□ 3.16
TUSC3-213ENST00000515859 LRPPRCP42704 1394 aaKnown RBP34.77■■■■□ 3.16
TUSC3-213ENST00000515859 SLC24A1O60721 1099 aa34.76■■■■□ 3.15
TUSC3-213ENST00000515859 SLC26A8Q96RN1 970 aa34.76■■■■□ 3.15
TUSC3-213ENST00000515859 STK26Q9P289 416 aa34.74■■■■□ 3.15
TUSC3-213ENST00000515859 ABCC11Q96J66 1382 aa34.74■■■■□ 3.15
TUSC3-213ENST00000515859 NPHP4O75161 1426 aaPredicted RBP34.74■■■■□ 3.15
TUSC3-213ENST00000515859 TESK2Q96S53 571 aa34.73■■■■□ 3.15
TUSC3-213ENST00000515859 POLR1AO95602 1720 aaPredicted RBP34.73■■■■□ 3.15
TUSC3-213ENST00000515859 CENPJQ9HC77 1338 aaPredicted RBP34.72■■■■□ 3.15
TUSC3-213ENST00000515859 NCKAP5LQ9HCH0 1330 aa34.72■■■■□ 3.15
TUSC3-213ENST00000515859 PIK3R4Q99570 1358 aa34.7■■■■□ 3.14
TUSC3-213ENST00000515859 HSPA2P54652 639 aa34.7■■■■□ 3.14
TUSC3-213ENST00000515859 DLC1Q96QB1 1528 aa34.68■■■■□ 3.14
TUSC3-213ENST00000515859 SBNO2Q9Y2G9 1366 aa34.68■■■■□ 3.14
TUSC3-213ENST00000515859 SIRT1Q96EB6 747 aa34.67■■■■□ 3.14
TUSC3-213ENST00000515859 TECPR2O15040 1411 aa34.66■■■■□ 3.14
TUSC3-213ENST00000515859 TMF1P82094 1093 aa34.66■■■■□ 3.14
TUSC3-213ENST00000515859 ARHGEF28Q8N1W1 1705 aaKnown RBP34.65■■■■□ 3.14
TUSC3-213ENST00000515859 C11orf95C9JLR9 678 aaPredicted RBP34.65■■■■□ 3.14
TUSC3-213ENST00000515859 WASHC2AQ641Q2 1341 aa34.64■■■■□ 3.14
TUSC3-213ENST00000515859 CCDC7Q96M83 1385 aa34.62■■■■□ 3.13
TUSC3-213ENST00000515859 POGKQ9P215 609 aa34.62■■■■□ 3.13
TUSC3-213ENST00000515859 KIF7Q2M1P5 1343 aa34.61■■■■□ 3.13
TUSC3-213ENST00000515859 PRAM1Q96QH2 718 aa34.61■■■■□ 3.13
TUSC3-213ENST00000515859 KNDC1Q76NI1 1749 aa34.6■■■■□ 3.13
TUSC3-213ENST00000515859 FAM135BQ49AJ0 1406 aa34.6■■■■□ 3.13
TUSC3-213ENST00000515859 PTPRUQ92729 1446 aa34.59■■■■□ 3.13
TUSC3-213ENST00000515859 CDCA8Q53HL2 280 aa34.59■■■■□ 3.13
TUSC3-213ENST00000515859 AMOTL2Q9Y2J4 779 aa34.59■■■■□ 3.13
TUSC3-213ENST00000515859 CPS1P31327 1500 aa34.57■■■■□ 3.12
TUSC3-213ENST00000515859 QRICH2Q9H0J4 1663 aa34.55■■■■□ 3.12
TUSC3-213ENST00000515859 DISP3Q9P2K9 1392 aa34.54■■■■□ 3.12
TUSC3-213ENST00000515859 PTCH1Q13635 1447 aa34.52■■■■□ 3.12
TUSC3-213ENST00000515859 ROBO2Q9HCK4 1378 aa34.51■■■■□ 3.11
TUSC3-213ENST00000515859 SAFB2Q14151 953 aaKnown RBP eCLIP34.51■■■■□ 3.11
TUSC3-213ENST00000515859 WAPLQ7Z5K2 1190 aa34.51■■■■□ 3.11
TUSC3-213ENST00000515859 DDX10Q13206 875 aaKnown RBP34.5■■■■□ 3.11
TUSC3-213ENST00000515859 DIEXFQ68CQ4 756 aaKnown RBP34.49■■■■□ 3.11
TUSC3-213ENST00000515859 XRN1Q8IZH2 1706 aaKnown RBP34.49■■■■□ 3.11
TUSC3-213ENST00000515859 EVC2Q86UK5 1308 aa34.47■■■■□ 3.11
TUSC3-213ENST00000515859 PLEKHH1Q9ULM0 1364 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms