RNA–Protein interactions for RNA: ENST00000515475.1

PRELID2-209, Transcript of PRELI domain containing 2, human

TSL 4

Gene PRELID2, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRELID2-209	ENST00000515475	ZFYVE9	O95405	1425 aa		41.18	■■■■■ 4.18
PRELID2-209	ENST00000515475	NKTR	P30414	1462 aa	Known RBP	41.18	■■■■■ 4.18
PRELID2-209	ENST00000515475	HDGF	P51858	240 aa	Known RBP	41.17	■■■■■ 4.18
PRELID2-209	ENST00000515475	SLC26A8	Q96RN1	970 aa		41.17	■■■■■ 4.18
PRELID2-209	ENST00000515475	TMEM94	Q12767	1356 aa		41.15	■■■■■ 4.18
PRELID2-209	ENST00000515475	PLEKHG1	Q9ULL1	1385 aa		41.13	■■■■■ 4.18
PRELID2-209	ENST00000515475	RIMS2	Q9UQ26	1411 aa		41.12	■■■■■ 4.17
PRELID2-209	ENST00000515475	BCAN	Q96GW7	911 aa		41.11	■■■■■ 4.17
PRELID2-209	ENST00000515475	PROSER2	Q86WR7	435 aa	Predicted RBP	41.08	■■■■■ 4.17
PRELID2-209	ENST00000515475	CHD2	O14647	1828 aa	Known RBP	41.08	■■■■■ 4.17
PRELID2-209	ENST00000515475	FAM135B	Q49AJ0	1406 aa		41.08	■■■■■ 4.17
PRELID2-209	ENST00000515475	PPP1R15A	O75807	674 aa	Predicted RBP	41.07	■■■■■ 4.17
PRELID2-209	ENST00000515475	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	41.05	■■■■■ 4.16
PRELID2-209	ENST00000515475	NUP155	O75694	1391 aa		41.04	■■■■■ 4.16
PRELID2-209	ENST00000515475	SENP3	Q9H4L4	574 aa	Predicted RBP	41.03	■■■■■ 4.16
PRELID2-209	ENST00000515475	PHF23	Q9BUL5	403 aa	Predicted RBP	41.02	■■■■■ 4.16
PRELID2-209	ENST00000515475	ITGAE	P38570	1179 aa		41.01	■■■■■ 4.16
PRELID2-209	ENST00000515475	CHGA	P10645	457 aa	Known RBP	40.99	■■■■■ 4.15
PRELID2-209	ENST00000515475	DIP2A	Q14689	1571 aa		40.99	■■■■■ 4.15
PRELID2-209	ENST00000515475	ROBO1	Q9Y6N7	1651 aa		40.98	■■■■■ 4.15
PRELID2-209	ENST00000515475	MSH6	P52701	1360 aa		40.97	■■■■■ 4.15
PRELID2-209	ENST00000515475	TBX22	Q9Y458	520 aa		40.96	■■■■■ 4.15
PRELID2-209	ENST00000515475	SPHKAP	Q2M3C7	1700 aa		40.92	■■■■■ 4.14
PRELID2-209	ENST00000515475	PPARGC1B	Q86YN6	1023 aa	Known RBP	40.91	■■■■■ 4.14
PRELID2-209	ENST00000515475	RBM33	Q96EV2	1170 aa	Known RBP	40.9	■■■■■ 4.14
PRELID2-209	ENST00000515475	NCOA3	Q9Y6Q9	1424 aa		40.89	■■■■■ 4.14
PRELID2-209	ENST00000515475	PIK3R4	Q99570	1358 aa		40.88	■■■■■ 4.14
PRELID2-209	ENST00000515475	ADAMTS13	Q76LX8	1427 aa		40.88	■■■■■ 4.13
PRELID2-209	ENST00000515475	RRBP1	Q9P2E9	1410 aa	Known RBP	40.86	■■■■■ 4.13
PRELID2-209	ENST00000515475	TRPM2	O94759	1503 aa		40.82	■■■■■ 4.12
PRELID2-209	ENST00000515475	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.79	■■■■■ 4.12
PRELID2-209	ENST00000515475	SLAIN2	Q9P270	581 aa		40.78	■■■■■ 4.12
PRELID2-209	ENST00000515475	PHLPP1	O60346	1717 aa		40.75	■■■■■ 4.11
PRELID2-209	ENST00000515475	SETBP1	Q9Y6X0	1596 aa		40.72	■■■■■ 4.11
PRELID2-209	ENST00000515475	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.7	■■■■■ 4.11
PRELID2-209	ENST00000515475	NAIP	Q13075	1403 aa		40.69	■■■■■ 4.1
PRELID2-209	ENST00000515475	NRXN3	Q9Y4C0	1643 aa		40.69	■■■■■ 4.1
PRELID2-209	ENST00000515475	C14orf37	Q86TY3	774 aa		40.68	■■■■■ 4.1
PRELID2-209	ENST00000515475	CLTCL1	P53675	1640 aa		40.66	■■■■■ 4.1
PRELID2-209	ENST00000515475	KIF1B	O60333	1816 aa		40.65	■■■■■ 4.1
PRELID2-209	ENST00000515475	CADPS2	Q86UW7	1296 aa		40.65	■■■■■ 4.1
PRELID2-209	ENST00000515475	C19orf44	Q9H6X5	657 aa		40.65	■■■■■ 4.1
PRELID2-209	ENST00000515475	XRN1	Q8IZH2	1706 aa	Known RBP	40.64	■■■■■ 4.1
PRELID2-209	ENST00000515475	ZNF326	Q5BKZ1	582 aa	Known RBP	40.63	■■■■■ 4.09
PRELID2-209	ENST00000515475	RGS17	Q9UGC6	210 aa	Predicted RBP	40.63	■■■■■ 4.09
PRELID2-209	ENST00000515475	AMOTL2	Q9Y2J4	779 aa		40.63	■■■■■ 4.09
PRELID2-209	ENST00000515475	PTPRU	Q92729	1446 aa		40.62	■■■■■ 4.09
PRELID2-209	ENST00000515475	JCAD	Q9P266	1359 aa		40.61	■■■■■ 4.09
PRELID2-209	ENST00000515475	COL16A1	Q07092	1604 aa	Predicted RBP	40.6	■■■■■ 4.09
PRELID2-209	ENST00000515475	ATF3	P18847	181 aa		40.59	■■■■■ 4.09
PRELID2-209	ENST00000515475	NEXMIF	Q5QGS0	1516 aa		40.58	■■■■■ 4.09
PRELID2-209	ENST00000515475	HFM1	A2PYH4	1435 aa		40.58	■■■■■ 4.09
PRELID2-209	ENST00000515475	DCC	P43146	1447 aa		40.57	■■■■■ 4.08
PRELID2-209	ENST00000515475	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.55	■■■■■ 4.08
PRELID2-209	ENST00000515475	MET	P08581	1390 aa		40.46	■■■■■ 4.07
PRELID2-209	ENST00000515475	TRIM52	Q96A61	297 aa		40.45	■■■■■ 4.07
PRELID2-209	ENST00000515475	SHPRH	Q149N8	1683 aa		40.44	■■■■■ 4.06
PRELID2-209	ENST00000515475	SPATA31A6	Q5VVP1	1343 aa		40.42	■■■■■ 4.06
PRELID2-209	ENST00000515475	POTEA	Q6S8J7	498 aa		40.39	■■■■■ 4.06
PRELID2-209	ENST00000515475	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40.38	■■■■■ 4.05
PRELID2-209	ENST00000515475	BRINP3	Q76B58	766 aa		40.37	■■■■■ 4.05
PRELID2-209	ENST00000515475	ADGRL3	Q9HAR2	1447 aa		40.36	■■■■■ 4.05
PRELID2-209	ENST00000515475	VGF	O15240	615 aa	Predicted RBP	40.36	■■■■■ 4.05
PRELID2-209	ENST00000515475	MST1R	Q04912	1400 aa		40.35	■■■■■ 4.05
PRELID2-209	ENST00000515475	SETD1A	O15047	1707 aa	Known RBP	40.35	■■■■■ 4.05
PRELID2-209	ENST00000515475	ASXL1	Q8IXJ9	1541 aa		40.35	■■■■■ 4.05
PRELID2-209	ENST00000515475	RPGRIP1L	Q68CZ1	1315 aa		40.35	■■■■■ 4.05
PRELID2-209	ENST00000515475	NALCN	Q8IZF0	1738 aa		40.33	■■■■■ 4.05
PRELID2-209	ENST00000515475	PPL	O60437	1756 aa		40.33	■■■■■ 4.05
PRELID2-209	ENST00000515475	NHSL1	Q5SYE7	1610 aa		40.32	■■■■■ 4.05
PRELID2-209	ENST00000515475	LRP6	O75581	1613 aa		40.3	■■■■■ 4.04
PRELID2-209	ENST00000515475	PTCH1	Q13635	1447 aa		40.29	■■■■■ 4.04
PRELID2-209	ENST00000515475	PRAG1	Q86YV5	1406 aa		40.25	■■■■■ 4.03
PRELID2-209	ENST00000515475	SETD5	Q9C0A6	1442 aa		40.24	■■■■■ 4.03
PRELID2-209	ENST00000515475	MEX3C	Q5U5Q3	659 aa	Known RBP	40.23	■■■■■ 4.03
PRELID2-209	ENST00000515475	ZNF772	Q68DY9	489 aa	Predicted RBP	40.18	■■■■■ 4.02
PRELID2-209	ENST00000515475	CCDC144A	A2RUR9	1427 aa		40.16	■■■■■ 4.02
PRELID2-209	ENST00000515475	ROBO2	Q9HCK4	1378 aa		40.14	■■■■■ 4.02
PRELID2-209	ENST00000515475	LRRC59	Q96AG4	307 aa	Known RBP	40.14	■■■■■ 4.02
PRELID2-209	ENST00000515475	LAMC1	P11047	1609 aa		40.12	■■■■■ 4.01
PRELID2-209	ENST00000515475	C1orf167	Q5SNV9	1468 aa		40.12	■■■■■ 4.01
PRELID2-209	ENST00000515475	ACIN1	Q9UKV3	1341 aa	Known RBP	40.1	■■■■■ 4.01
PRELID2-209	ENST00000515475	IFT172	Q9UG01	1749 aa		40.09	■■■■■ 4.01
PRELID2-209	ENST00000515475	FOXD1	Q16676	465 aa		40.08	■■■■■ 4.01
PRELID2-209	ENST00000515475	NUTM2B	A6NNL0	878 aa	Predicted RBP	40.05	■■■■■ 4
PRELID2-209	ENST00000515475	NUTM2E	B1AL46	878 aa	Predicted RBP	40.05	■■■■■ 4
PRELID2-209	ENST00000515475	NUTM2A	Q8IVF1	878 aa	Predicted RBP	40.05	■■■■■ 4
PRELID2-209	ENST00000515475	MPHOSPH9	Q99550	1183 aa		40.05	■■■■■ 4
PRELID2-209	ENST00000515475	SPATA31E1	Q6ZUB1	1445 aa		40.04	■■■■■ 4
PRELID2-209	ENST00000515475	ANKRD30B	Q9BXX2	1392 aa		40.03	■■■■■ 4
PRELID2-209	ENST00000515475	PNPLA6	Q8IY17	1366 aa		40.02	■■■■■ 4
PRELID2-209	ENST00000515475	CDC42BPG	Q6DT37	1551 aa		39.99	■■■■□ 3.99
PRELID2-209	ENST00000515475	DDX17	Q92841	729 aa	Known RBP	39.98	■■■■□ 3.99
PRELID2-209	ENST00000515475	ADGRF5	Q8IZF2	1346 aa		39.97	■■■■□ 3.99
PRELID2-209	ENST00000515475	RGL3	Q3MIN7	710 aa		39.95	■■■■□ 3.99
PRELID2-209	ENST00000515475	KNDC1	Q76NI1	1749 aa		39.95	■■■■□ 3.99
PRELID2-209	ENST00000515475	TECPR2	O15040	1411 aa		39.94	■■■■□ 3.98
PRELID2-209	ENST00000515475	SOS2	Q07890	1332 aa	Predicted RBP	39.93	■■■■□ 3.98
PRELID2-209	ENST00000515475	CDK12	Q9NYV4	1490 aa	Predicted RBP	39.93	■■■■□ 3.98
PRELID2-209	ENST00000515475	AFF2	P51816	1311 aa		39.92	■■■■□ 3.98

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms