RNA–Protein interactions for RNA: ENST00000515435.5

CSNK1A1-205, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5 BASIC

Gene CSNK1A1, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-205ENST00000515435 MS4A1P11836 297 aa9.37□□□□□ -0.91
CSNK1A1-205ENST00000515435 VARS2Q5ST30 1063 aaKnown RBP9.37□□□□□ -0.91
CSNK1A1-205ENST00000515435 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
CSNK1A1-205ENST00000515435 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
CSNK1A1-205ENST00000515435 PLEKHG3A1L390 1219 aa9.36□□□□□ -0.91
CSNK1A1-205ENST00000515435 PSEN2P49810 448 aa9.36□□□□□ -0.91
CSNK1A1-205ENST00000515435 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
CSNK1A1-205ENST00000515435 POTEEQ6S8J3 1075 aa9.36□□□□□ -0.91
CSNK1A1-205ENST00000515435 TNIKQ9UKE5 1360 aa9.35□□□□□ -0.91
CSNK1A1-205ENST00000515435 ERBB3P21860 1342 aa9.35□□□□□ -0.91
CSNK1A1-205ENST00000515435 CCER2I3L3R5 266 aa9.35□□□□□ -0.91
CSNK1A1-205ENST00000515435 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
CSNK1A1-205ENST00000515435 TMUB1Q9BVT8 246 aa9.35□□□□□ -0.91
CSNK1A1-205ENST00000515435 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CSNK1A1-205ENST00000515435 USP35Q9P2H5 1018 aa9.34□□□□□ -0.91
CSNK1A1-205ENST00000515435 AXIN2Q9Y2T1 843 aa9.34□□□□□ -0.91
CSNK1A1-205ENST00000515435 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
CSNK1A1-205ENST00000515435 OATP04181 439 aa9.34□□□□□ -0.91
CSNK1A1-205ENST00000515435 CHMP4AQ9BY43 222 aa9.34□□□□□ -0.91
CSNK1A1-205ENST00000515435 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
CSNK1A1-205ENST00000515435 WASHC2AQ641Q2 1341 aa9.33□□□□□ -0.92
CSNK1A1-205ENST00000515435 EMP3P54852 163 aa9.33□□□□□ -0.92
CSNK1A1-205ENST00000515435 FAM163AQ96GL9 167 aaPredicted RBP9.32□□□□□ -0.92
CSNK1A1-205ENST00000515435 GPCPD1Q9NPB8 672 aa9.32□□□□□ -0.92
CSNK1A1-205ENST00000515435 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
CSNK1A1-205ENST00000515435 CLCN1P35523 988 aa9.32□□□□□ -0.92
CSNK1A1-205ENST00000515435 ITGAEP38570 1179 aa9.32□□□□□ -0.92
CSNK1A1-205ENST00000515435 NUDT18Q6ZVK8 323 aa9.32□□□□□ -0.92
CSNK1A1-205ENST00000515435 WASHC2CQ9Y4E1 1318 aa9.31□□□□□ -0.92
CSNK1A1-205ENST00000515435 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
CSNK1A1-205ENST00000515435 SMAPO00193 183 aa9.31□□□□□ -0.92
CSNK1A1-205ENST00000515435 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
CSNK1A1-205ENST00000515435 EYA1Q99502 592 aa9.31□□□□□ -0.92
CSNK1A1-205ENST00000515435 POTEB3A0JP26 581 aa9.3□□□□□ -0.92
CSNK1A1-205ENST00000515435 POTEBQ6S5H4 581 aa9.3□□□□□ -0.92
CSNK1A1-205ENST00000515435 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
CSNK1A1-205ENST00000515435 RBM46Q8TBY0 533 aaKnown RBP9.3□□□□□ -0.92
CSNK1A1-205ENST00000515435 ZBED2Q9BTP6 218 aa9.3□□□□□ -0.92
CSNK1A1-205ENST00000515435 PPP4R2Q9NY27 417 aa9.3□□□□□ -0.92
CSNK1A1-205ENST00000515435 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
CSNK1A1-205ENST00000515435 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
CSNK1A1-205ENST00000515435 SSTR3P32745 418 aaPredicted RBP9.28□□□□□ -0.92
CSNK1A1-205ENST00000515435 TATDN2Q93075 761 aa9.28□□□□□ -0.92
CSNK1A1-205ENST00000515435 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
CSNK1A1-205ENST00000515435 PNMA3Q9UL41 463 aa9.28□□□□□ -0.92
CSNK1A1-205ENST00000515435 ARHGAP33O14559 1287 aa9.27□□□□□ -0.93
CSNK1A1-205ENST00000515435 KIAA1468Q9P260 1216 aa9.27□□□□□ -0.93
CSNK1A1-205ENST00000515435 EEA1Q15075 1411 aa9.27□□□□□ -0.93
CSNK1A1-205ENST00000515435 DHX57Q6P158 1386 aaKnown RBP9.26□□□□□ -0.93
CSNK1A1-205ENST00000515435 IPO9Q96P70 1041 aaKnown RBP9.26□□□□□ -0.93
CSNK1A1-205ENST00000515435 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
CSNK1A1-205ENST00000515435 PACS2Q86VP3 889 aa9.25□□□□□ -0.93
CSNK1A1-205ENST00000515435 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CSNK1A1-205ENST00000515435 HS3ST6Q96QI5 342 aa9.25□□□□□ -0.93
CSNK1A1-205ENST00000515435 BEGAINQ9BUH8 593 aa9.25□□□□□ -0.93
CSNK1A1-205ENST00000515435 ANP32AP39687 249 aaKnown RBP9.24□□□□□ -0.93
CSNK1A1-205ENST00000515435 PDE4CQ08493 712 aa9.24□□□□□ -0.93
CSNK1A1-205ENST00000515435 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
CSNK1A1-205ENST00000515435 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
CSNK1A1-205ENST00000515435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
CSNK1A1-205ENST00000515435 HMGB1P09429 215 aaKnown RBP9.22□□□□□ -0.93
CSNK1A1-205ENST00000515435 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.93
CSNK1A1-205ENST00000515435 DNAJB2P25686 324 aa9.21□□□□□ -0.93
CSNK1A1-205ENST00000515435 TMEM134Q9H6X4 195 aa9.21□□□□□ -0.93
CSNK1A1-205ENST00000515435 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.94
CSNK1A1-205ENST00000515435 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
CSNK1A1-205ENST00000515435 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
CSNK1A1-205ENST00000515435 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
CSNK1A1-205ENST00000515435 FAM43AQ8N2R8 423 aa9.19□□□□□ -0.94
CSNK1A1-205ENST00000515435 NACADO15069 1562 aa9.19□□□□□ -0.94
CSNK1A1-205ENST00000515435 CUX2O14529 1486 aa9.19□□□□□ -0.94
CSNK1A1-205ENST00000515435 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
CSNK1A1-205ENST00000515435 PBX2P40425 430 aa9.19□□□□□ -0.94
CSNK1A1-205ENST00000515435 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
CSNK1A1-205ENST00000515435 ZMYND15Q9H091 742 aa9.18□□□□□ -0.94
CSNK1A1-205ENST00000515435 ANP32CO43423 234 aa9.17□□□□□ -0.94
CSNK1A1-205ENST00000515435 PPP1R15AO75807 674 aaPredicted RBP9.17□□□□□ -0.94
CSNK1A1-205ENST00000515435 TAF7LQ5H9L4 462 aa9.17□□□□□ -0.94
CSNK1A1-205ENST00000515435 EIF4G1Q04637 1599 aaKnown RBP9.17□□□□□ -0.94
CSNK1A1-205ENST00000515435 HSP90B1P14625 803 aaKnown RBP9.17□□□□□ -0.94
CSNK1A1-205ENST00000515435 CD46P15529 392 aa9.17□□□□□ -0.94
CSNK1A1-205ENST00000515435 DHX37Q8IY37 1157 aaKnown RBP9.16□□□□□ -0.94
CSNK1A1-205ENST00000515435 GOPCQ9HD26 462 aa9.16□□□□□ -0.94
CSNK1A1-205ENST00000515435 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
CSNK1A1-205ENST00000515435 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
CSNK1A1-205ENST00000515435 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
CSNK1A1-205ENST00000515435 MYSM1Q5VVJ2 828 aa9.15□□□□□ -0.94
CSNK1A1-205ENST00000515435 GOLGA3Q08378 1498 aa9.15□□□□□ -0.94
CSNK1A1-205ENST00000515435 PROCA1Q8NCQ7 364 aaPredicted RBP9.15□□□□□ -0.95
CSNK1A1-205ENST00000515435 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.95
CSNK1A1-205ENST00000515435 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.95
CSNK1A1-205ENST00000515435 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 LSM11P83369 360 aaKnown RBP eCLIP9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 IGSF3O75054 1194 aa9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 SLC10A3P09131 477 aa9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 SULF1Q8IWU6 871 aa9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
CSNK1A1-205ENST00000515435 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms