RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 BANK1Q8NDB2 785 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 TATDN2Q93075 761 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
HERC6-208ENST00000515365 FNBP4Q8N3X1 1017 aaPredicted RBP7.62□□□□□ -1.19
HERC6-208ENST00000515365 POM121Q96HA1 1249 aa7.62□□□□□ -1.19
HERC6-208ENST00000515365 TMEM134Q9H6X4 195 aa7.62□□□□□ -1.19
HERC6-208ENST00000515365 PNMA3Q9UL41 463 aa7.62□□□□□ -1.19
HERC6-208ENST00000515365 DDX11L8A8MPP1 907 aa7.61□□□□□ -1.19
HERC6-208ENST00000515365 SPTLC1O15269 473 aa7.61□□□□□ -1.19
HERC6-208ENST00000515365 TMEM259Q4ZIN3 620 aa7.61□□□□□ -1.19
HERC6-208ENST00000515365 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
HERC6-208ENST00000515365 SNPHO15079 494 aa7.6□□□□□ -1.19
HERC6-208ENST00000515365 RAD21O60216 631 aa7.6□□□□□ -1.19
HERC6-208ENST00000515365 RSBN1LQ6PCB5 846 aaPredicted RBP7.6□□□□□ -1.19
HERC6-208ENST00000515365 NUTM1Q86Y26 1132 aa7.6□□□□□ -1.19
HERC6-208ENST00000515365 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
HERC6-208ENST00000515365 GJA5P36382 358 aa7.59□□□□□ -1.19
HERC6-208ENST00000515365 CCDC82Q8N4S0 544 aa7.59□□□□□ -1.19
HERC6-208ENST00000515365 COG6Q9Y2V7 657 aa7.59□□□□□ -1.19
HERC6-208ENST00000515365 MOXD2PA6NHM9 499 aa7.58□□□□□ -1.2
HERC6-208ENST00000515365 PROX2Q3B8N5 592 aa7.58□□□□□ -1.2
HERC6-208ENST00000515365 KCNK17Q96T54 332 aa7.58□□□□□ -1.2
HERC6-208ENST00000515365 SMAPO00193 183 aa7.57□□□□□ -1.2
HERC6-208ENST00000515365 SOCS7O14512 581 aa7.56□□□□□ -1.2
HERC6-208ENST00000515365 LILRB3O75022 631 aa7.56□□□□□ -1.2
HERC6-208ENST00000515365 NDUFV2P19404 249 aa7.56□□□□□ -1.2
HERC6-208ENST00000515365 MTMR14Q8NCE2 650 aa7.56□□□□□ -1.2
HERC6-208ENST00000515365 ZNF777Q9ULD5 760 aaPredicted RBP7.56□□□□□ -1.2
HERC6-208ENST00000515365 QPCTQ16769 361 aa7.55□□□□□ -1.2
HERC6-208ENST00000515365 CSPP1Q1MSJ5 1256 aa7.55□□□□□ -1.2
HERC6-208ENST00000515365 RDH13Q8NBN7 331 aa7.55□□□□□ -1.2
HERC6-208ENST00000515365 ZBED2Q9BTP6 218 aa7.55□□□□□ -1.2
HERC6-208ENST00000515365 PCDHB15Q9Y5E8 787 aa7.55□□□□□ -1.2
HERC6-208ENST00000515365 KDM4AO75164 1064 aa7.54□□□□□ -1.2
HERC6-208ENST00000515365 KCNH8Q96L42 1107 aa7.54□□□□□ -1.2
HERC6-208ENST00000515365 KIAA1468Q9P260 1216 aa7.54□□□□□ -1.2
HERC6-208ENST00000515365 GCGRP47871 477 aa7.53□□□□□ -1.2
HERC6-208ENST00000515365 USP46P62068 366 aa7.53□□□□□ -1.2
HERC6-208ENST00000515365 PRPF38BQ5VTL8 546 aaKnown RBP7.53□□□□□ -1.2
HERC6-208ENST00000515365 HOXA2O43364 376 aa7.52□□□□□ -1.21
HERC6-208ENST00000515365 RTL5Q5HYW3 569 aaPredicted RBP7.52□□□□□ -1.21
HERC6-208ENST00000515365 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
HERC6-208ENST00000515365 CABLES1Q8TDN4 633 aa7.51□□□□□ -1.21
HERC6-208ENST00000515365 GDPD2Q9HCC8 539 aa7.51□□□□□ -1.21
HERC6-208ENST00000515365 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
HERC6-208ENST00000515365 RABGEF1Q9UJ41 708 aa7.51□□□□□ -1.21
HERC6-208ENST00000515365 SERPINA10Q9UK55 444 aa7.51□□□□□ -1.21
HERC6-208ENST00000515365 AP1G2O75843 785 aa7.5□□□□□ -1.21
HERC6-208ENST00000515365 SLC10A3P09131 477 aa7.5□□□□□ -1.21
HERC6-208ENST00000515365 PSEN2P49810 448 aa7.5□□□□□ -1.21
HERC6-208ENST00000515365 SWT1Q5T5J6 900 aaKnown RBP7.5□□□□□ -1.21
HERC6-208ENST00000515365 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
HERC6-208ENST00000515365 SLC4A5Q9BY07 1137 aa7.5□□□□□ -1.21
HERC6-208ENST00000515365 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
HERC6-208ENST00000515365 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
HERC6-208ENST00000515365 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
HERC6-208ENST00000515365 USP17L8P0C7I0 530 aa7.49□□□□□ -1.21
HERC6-208ENST00000515365 FDX1P10109 184 aa7.49□□□□□ -1.21
HERC6-208ENST00000515365 HRCP23327 699 aa7.49□□□□□ -1.21
HERC6-208ENST00000515365 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
HERC6-208ENST00000515365 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
HERC6-208ENST00000515365 ZBTB3Q9H5J0 574 aa7.49□□□□□ -1.21
HERC6-208ENST00000515365 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
HERC6-208ENST00000515365 POTEEQ6S8J3 1075 aa7.48□□□□□ -1.21
HERC6-208ENST00000515365 PODXL2Q9NZ53 605 aa7.48□□□□□ -1.21
HERC6-208ENST00000515365 PCDHGC3Q9UN70 934 aa7.48□□□□□ -1.21
HERC6-208ENST00000515365 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
HERC6-208ENST00000515365 OTUD5Q96G74 571 aa7.47□□□□□ -1.21
HERC6-208ENST00000515365 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
HERC6-208ENST00000515365 SEPT9Q9UHD8 586 aaPredicted RBP7.47□□□□□ -1.21
HERC6-208ENST00000515365 TBC1D2BQ9UPU7 963 aa7.47□□□□□ -1.21
HERC6-208ENST00000515365 ABL2P42684 1182 aa7.46□□□□□ -1.22
HERC6-208ENST00000515365 GUCA2AQ02747 115 aa7.46□□□□□ -1.22
HERC6-208ENST00000515365 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
HERC6-208ENST00000515365 DMRTA1Q5VZB9 504 aa7.46□□□□□ -1.22
HERC6-208ENST00000515365 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
HERC6-208ENST00000515365 HLA-CQ95604 372 aa7.46□□□□□ -1.22
HERC6-208ENST00000515365 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
HERC6-208ENST00000515365 ABCC9O60706 1549 aa7.46□□□□□ -1.22
HERC6-208ENST00000515365 FAM98CQ17RN3 349 aaKnown RBP7.45□□□□□ -1.22
HERC6-208ENST00000515365 ERBB3P21860 1342 aa7.45□□□□□ -1.22
HERC6-208ENST00000515365 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
HERC6-208ENST00000515365 VPS9D1Q9Y2B5 631 aa7.44□□□□□ -1.22
HERC6-208ENST00000515365 POM121CA8CG34 1229 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 PDIA4P13667 645 aaKnown RBP7.43□□□□□ -1.22
HERC6-208ENST00000515365 PBX2P40425 430 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 SLC4A3P48751 1232 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 MTMR2Q13614 643 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 LAPTM4BQ86VI4 370 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 SLF2Q8IX21 1173 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 NDUFB9Q9Y6M9 179 aa7.43□□□□□ -1.22
HERC6-208ENST00000515365 CFHP08603 1231 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 CTDSPL2Q05D32 466 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 FUT2Q10981 343 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 IRF5Q13568 498 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 GRIPAP1Q4V328 841 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 SAMD7Q7Z3H4 446 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 TRIM34Q9BYJ4 488 aa7.42□□□□□ -1.22
HERC6-208ENST00000515365 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms