RNA–Protein interactions for RNA: ENST00000514782.5

RBM47-213, Transcript of RNA binding motif protein 47, human

TSL 3

Gene RBM47, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-213	ENST00000514782	ALK	Q9UM73	1620 aa		29.47	■■■□□ 2.31
RBM47-213	ENST00000514782	PPP1R15A	O75807	674 aa	Predicted RBP	29.47	■■■□□ 2.31
RBM47-213	ENST00000514782	RIMS2	Q9UQ26	1411 aa		29.46	■■■□□ 2.31
RBM47-213	ENST00000514782	XIRP1	Q702N8	1843 aa	Known RBP	29.46	■■■□□ 2.31
RBM47-213	ENST00000514782	HSPA1L	P34931	641 aa		29.46	■■■□□ 2.31
RBM47-213	ENST00000514782	ZFYVE9	O95405	1425 aa		29.45	■■■□□ 2.3
RBM47-213	ENST00000514782	HDGF	P51858	240 aa	Known RBP	29.42	■■■□□ 2.3
RBM47-213	ENST00000514782	SPHKAP	Q2M3C7	1700 aa		29.4	■■■□□ 2.3
RBM47-213	ENST00000514782	PLEKHG1	Q9ULL1	1385 aa		29.39	■■■□□ 2.3
RBM47-213	ENST00000514782	KCNA6	P17658	529 aa		29.39	■■■□□ 2.3
RBM47-213	ENST00000514782	NAIP	Q13075	1403 aa		29.37	■■■□□ 2.29
RBM47-213	ENST00000514782	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.36	■■■□□ 2.29
RBM47-213	ENST00000514782	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.36	■■■□□ 2.29
RBM47-213	ENST00000514782	TMEM94	Q12767	1356 aa		29.36	■■■□□ 2.29
RBM47-213	ENST00000514782	NWD1	Q149M9	1564 aa		29.35	■■■□□ 2.29
RBM47-213	ENST00000514782	PROSER2	Q86WR7	435 aa	Predicted RBP	29.35	■■■□□ 2.29
RBM47-213	ENST00000514782	NKTR	P30414	1462 aa	Known RBP	29.34	■■■□□ 2.29
RBM47-213	ENST00000514782	ILDR2	Q71H61	639 aa		29.31	■■■□□ 2.28
RBM47-213	ENST00000514782	RBM33	Q96EV2	1170 aa	Known RBP	29.31	■■■□□ 2.28
RBM47-213	ENST00000514782	CHD2	O14647	1828 aa	Known RBP	29.31	■■■□□ 2.28
RBM47-213	ENST00000514782	HFM1	A2PYH4	1435 aa		29.28	■■■□□ 2.28
RBM47-213	ENST00000514782	TRIM52	Q96A61	297 aa		29.28	■■■□□ 2.28
RBM47-213	ENST00000514782	MED1	Q15648	1581 aa	Predicted RBP	29.26	■■■□□ 2.28
RBM47-213	ENST00000514782	DIP2A	Q14689	1571 aa		29.26	■■■□□ 2.27
RBM47-213	ENST00000514782	CLTCL1	P53675	1640 aa		29.24	■■■□□ 2.27
RBM47-213	ENST00000514782	ZNF326	Q5BKZ1	582 aa	Known RBP	29.24	■■■□□ 2.27
RBM47-213	ENST00000514782	TBX22	Q9Y458	520 aa		29.24	■■■□□ 2.27
RBM47-213	ENST00000514782	ADAMTS13	Q76LX8	1427 aa		29.23	■■■□□ 2.27
RBM47-213	ENST00000514782	TRPM2	O94759	1503 aa		29.23	■■■□□ 2.27
RBM47-213	ENST00000514782	MSH6	P52701	1360 aa		29.22	■■■□□ 2.27
RBM47-213	ENST00000514782	KIF1B	O60333	1816 aa		29.2	■■■□□ 2.27
RBM47-213	ENST00000514782	ROBO1	Q9Y6N7	1651 aa		29.17	■■■□□ 2.26
RBM47-213	ENST00000514782	FAM135B	Q49AJ0	1406 aa		29.15	■■■□□ 2.26
RBM47-213	ENST00000514782	C14orf37	Q86TY3	774 aa		29.15	■■■□□ 2.26
RBM47-213	ENST00000514782	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.15	■■■□□ 2.26
RBM47-213	ENST00000514782	PIK3R4	Q99570	1358 aa		29.14	■■■□□ 2.26
RBM47-213	ENST00000514782	NRXN3	Q9Y4C0	1643 aa		29.13	■■■□□ 2.25
RBM47-213	ENST00000514782	SETBP1	Q9Y6X0	1596 aa		29.12	■■■□□ 2.25
RBM47-213	ENST00000514782	NEXMIF	Q5QGS0	1516 aa		29.1	■■■□□ 2.25
RBM47-213	ENST00000514782	PHF23	Q9BUL5	403 aa	Predicted RBP	29.1	■■■□□ 2.25
RBM47-213	ENST00000514782	AMOTL2	Q9Y2J4	779 aa		29.08	■■■□□ 2.25
RBM47-213	ENST00000514782	SOCS7	O14512	581 aa		29.07	■■■□□ 2.24
RBM47-213	ENST00000514782	PTPRU	Q92729	1446 aa		29.07	■■■□□ 2.24
RBM47-213	ENST00000514782	NCOA3	Q9Y6Q9	1424 aa		29.06	■■■□□ 2.24
RBM47-213	ENST00000514782	SLAIN2	Q9P270	581 aa		29.06	■■■□□ 2.24
RBM47-213	ENST00000514782	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.05	■■■□□ 2.24
RBM47-213	ENST00000514782	XRN1	Q8IZH2	1706 aa	Known RBP	29.04	■■■□□ 2.24
RBM47-213	ENST00000514782	PHLPP1	O60346	1717 aa		29.02	■■■□□ 2.24
RBM47-213	ENST00000514782	FOXD1	Q16676	465 aa		29.01	■■■□□ 2.23
RBM47-213	ENST00000514782	ATF3	P18847	181 aa		29	■■■□□ 2.23
RBM47-213	ENST00000514782	MET	P08581	1390 aa		29	■■■□□ 2.23
RBM47-213	ENST00000514782	C19orf44	Q9H6X5	657 aa		28.99	■■■□□ 2.23
RBM47-213	ENST00000514782	CADPS2	Q86UW7	1296 aa		28.97	■■■□□ 2.23
RBM47-213	ENST00000514782	ACIN1	Q9UKV3	1341 aa	Known RBP	28.96	■■■□□ 2.23
RBM47-213	ENST00000514782	PPL	O60437	1756 aa		28.96	■■■□□ 2.23
RBM47-213	ENST00000514782	VGF	O15240	615 aa	Predicted RBP	28.95	■■■□□ 2.22
RBM47-213	ENST00000514782	CCDC144A	A2RUR9	1427 aa		28.93	■■■□□ 2.22
RBM47-213	ENST00000514782	MPHOSPH9	Q99550	1183 aa		28.92	■■■□□ 2.22
RBM47-213	ENST00000514782	RPGRIP1L	Q68CZ1	1315 aa		28.92	■■■□□ 2.22
RBM47-213	ENST00000514782	SETD1A	O15047	1707 aa	Known RBP	28.9	■■■□□ 2.22
RBM47-213	ENST00000514782	DCC	P43146	1447 aa		28.89	■■■□□ 2.22
RBM47-213	ENST00000514782	SETD5	Q9C0A6	1442 aa		28.88	■■■□□ 2.21
RBM47-213	ENST00000514782	COL16A1	Q07092	1604 aa	Predicted RBP	28.88	■■■□□ 2.21
RBM47-213	ENST00000514782	NALCN	Q8IZF0	1738 aa		28.86	■■■□□ 2.21
RBM47-213	ENST00000514782	JCAD	Q9P266	1359 aa		28.85	■■■□□ 2.21
RBM47-213	ENST00000514782	RGL3	Q3MIN7	710 aa		28.84	■■■□□ 2.21
RBM47-213	ENST00000514782	ADGRL3	Q9HAR2	1447 aa		28.84	■■■□□ 2.21
RBM47-213	ENST00000514782	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.83	■■■□□ 2.21
RBM47-213	ENST00000514782	BRINP3	Q76B58	766 aa		28.81	■■■□□ 2.2
RBM47-213	ENST00000514782	MST1R	Q04912	1400 aa		28.8	■■■□□ 2.2
RBM47-213	ENST00000514782	PTCH1	Q13635	1447 aa		28.8	■■■□□ 2.2
RBM47-213	ENST00000514782	IFT172	Q9UG01	1749 aa		28.8	■■■□□ 2.2
RBM47-213	ENST00000514782	SPATA31E1	Q6ZUB1	1445 aa		28.79	■■■□□ 2.2
RBM47-213	ENST00000514782	ASXL1	Q8IXJ9	1541 aa		28.79	■■■□□ 2.2
RBM47-213	ENST00000514782	RAB3GAP2	Q9H2M9	1393 aa		28.78	■■■□□ 2.2
RBM47-213	ENST00000514782	ROBO2	Q9HCK4	1378 aa		28.77	■■■□□ 2.2
RBM47-213	ENST00000514782	RGS17	Q9UGC6	210 aa	Predicted RBP	28.77	■■■□□ 2.2
RBM47-213	ENST00000514782	ADGRF5	Q8IZF2	1346 aa		28.76	■■■□□ 2.19
RBM47-213	ENST00000514782	ANKRD30B	Q9BXX2	1392 aa		28.75	■■■□□ 2.19
RBM47-213	ENST00000514782	SHPRH	Q149N8	1683 aa		28.74	■■■□□ 2.19
RBM47-213	ENST00000514782	NHSL1	Q5SYE7	1610 aa		28.72	■■■□□ 2.19
RBM47-213	ENST00000514782	PRAG1	Q86YV5	1406 aa		28.7	■■■□□ 2.19
RBM47-213	ENST00000514782	SPATA31A6	Q5VVP1	1343 aa		28.69	■■■□□ 2.18
RBM47-213	ENST00000514782	MEX3C	Q5U5Q3	659 aa	Known RBP	28.68	■■■□□ 2.18
RBM47-213	ENST00000514782	STK26	Q9P289	416 aa		28.67	■■■□□ 2.18
RBM47-213	ENST00000514782	LRP6	O75581	1613 aa		28.67	■■■□□ 2.18
RBM47-213	ENST00000514782	C1orf167	Q5SNV9	1468 aa		28.66	■■■□□ 2.18
RBM47-213	ENST00000514782	POTEA	Q6S8J7	498 aa		28.65	■■■□□ 2.18
RBM47-213	ENST00000514782	PIK3C2G	O75747	1445 aa		28.65	■■■□□ 2.18
RBM47-213	ENST00000514782	DDX17	Q92841	729 aa	Known RBP	28.64	■■■□□ 2.18
RBM47-213	ENST00000514782	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.62	■■■□□ 2.17
RBM47-213	ENST00000514782	NUTM2E	B1AL46	878 aa	Predicted RBP	28.62	■■■□□ 2.17
RBM47-213	ENST00000514782	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.62	■■■□□ 2.17
RBM47-213	ENST00000514782	KNDC1	Q76NI1	1749 aa		28.61	■■■□□ 2.17
RBM47-213	ENST00000514782	HRC	P23327	699 aa		28.61	■■■□□ 2.17
RBM47-213	ENST00000514782	TMEM132E	Q6IEE7	984 aa		28.61	■■■□□ 2.17
RBM47-213	ENST00000514782	LRPPRC	P42704	1394 aa	Known RBP	28.6	■■■□□ 2.17
RBM47-213	ENST00000514782	CDC42BPG	Q6DT37	1551 aa		28.59	■■■□□ 2.17
RBM47-213	ENST00000514782	LRRC59	Q96AG4	307 aa	Known RBP	28.59	■■■□□ 2.17
RBM47-213	ENST00000514782	ORAI2	Q96SN7	254 aa		28.58	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms