RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
LEMD2-213ENST00000514636 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
LEMD2-213ENST00000514636 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
LEMD2-213ENST00000514636 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
LEMD2-213ENST00000514636 KANK1Q14678 1352 aa23.35■■□□□ 1.33
LEMD2-213ENST00000514636 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
LEMD2-213ENST00000514636 PLEKHG1Q9ULL1 1385 aa23.34■■□□□ 1.33
LEMD2-213ENST00000514636 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.33
LEMD2-213ENST00000514636 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
LEMD2-213ENST00000514636 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
LEMD2-213ENST00000514636 DIP2AQ14689 1571 aa23.29■■□□□ 1.32
LEMD2-213ENST00000514636 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
LEMD2-213ENST00000514636 RPRD2Q5VT52 1461 aaKnown RBP23.29■■□□□ 1.32
LEMD2-213ENST00000514636 DAPK1P53355 1430 aa23.27■■□□□ 1.32
LEMD2-213ENST00000514636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.31
LEMD2-213ENST00000514636 TBX22Q9Y458 520 aa23.26■■□□□ 1.31
LEMD2-213ENST00000514636 PTPN23Q9H3S7 1636 aa23.23■■□□□ 1.31
LEMD2-213ENST00000514636 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.23■■□□□ 1.31
LEMD2-213ENST00000514636 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
LEMD2-213ENST00000514636 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
LEMD2-213ENST00000514636 RXRBP28702 533 aa23.22■■□□□ 1.31
LEMD2-213ENST00000514636 ADAMTS13Q76LX8 1427 aa23.22■■□□□ 1.31
LEMD2-213ENST00000514636 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
LEMD2-213ENST00000514636 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
LEMD2-213ENST00000514636 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
LEMD2-213ENST00000514636 RIMS2Q9UQ26 1411 aa23.21■■□□□ 1.31
LEMD2-213ENST00000514636 ANKRD30AQ9BXX3 1397 aa23.2■■□□□ 1.3
LEMD2-213ENST00000514636 DCCP43146 1447 aa23.18■■□□□ 1.3
LEMD2-213ENST00000514636 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
LEMD2-213ENST00000514636 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
LEMD2-213ENST00000514636 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
LEMD2-213ENST00000514636 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
LEMD2-213ENST00000514636 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
LEMD2-213ENST00000514636 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
LEMD2-213ENST00000514636 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
LEMD2-213ENST00000514636 RGS12O14924 1447 aa23.13■■□□□ 1.29
LEMD2-213ENST00000514636 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
LEMD2-213ENST00000514636 BCANQ96GW7 911 aa23.12■■□□□ 1.29
LEMD2-213ENST00000514636 AFF2P51816 1311 aa23.11■■□□□ 1.29
LEMD2-213ENST00000514636 ATF3P18847 181 aa23.11■■□□□ 1.29
LEMD2-213ENST00000514636 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
LEMD2-213ENST00000514636 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
LEMD2-213ENST00000514636 EP400Q96L91 3159 aa23.09■■□□□ 1.29
LEMD2-213ENST00000514636 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
LEMD2-213ENST00000514636 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
LEMD2-213ENST00000514636 TRPM2O94759 1503 aa23.08■■□□□ 1.28
LEMD2-213ENST00000514636 MST1RQ04912 1400 aa23.07■■□□□ 1.28
LEMD2-213ENST00000514636 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
LEMD2-213ENST00000514636 RBM6P78332 1123 aaKnown RBP23.06■■□□□ 1.28
LEMD2-213ENST00000514636 C14orf37Q86TY3 774 aa23.05■■□□□ 1.28
LEMD2-213ENST00000514636 ANKRD50Q9ULJ7 1429 aa23.05■■□□□ 1.28
LEMD2-213ENST00000514636 CHIC2Q9UKJ5 165 aa23.04■■□□□ 1.28
LEMD2-213ENST00000514636 UNC13BO14795 1591 aa23.04■■□□□ 1.28
LEMD2-213ENST00000514636 AMOTL2Q9Y2J4 779 aa23.02■■□□□ 1.28
LEMD2-213ENST00000514636 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
LEMD2-213ENST00000514636 NUTM2BA6NNL0 878 aaPredicted RBP23.01■■□□□ 1.27
LEMD2-213ENST00000514636 NUTM2EB1AL46 878 aaPredicted RBP23.01■■□□□ 1.27
LEMD2-213ENST00000514636 NUTM2AQ8IVF1 878 aaPredicted RBP23.01■■□□□ 1.27
LEMD2-213ENST00000514636 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
LEMD2-213ENST00000514636 LAMC1P11047 1609 aa23■■□□□ 1.27
LEMD2-213ENST00000514636 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
LEMD2-213ENST00000514636 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
LEMD2-213ENST00000514636 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
LEMD2-213ENST00000514636 E9PCH4 1651 aa22.98■■□□□ 1.27
LEMD2-213ENST00000514636 ATAD2Q6PL18 1390 aa22.95■■□□□ 1.26
LEMD2-213ENST00000514636 ADGRL3Q9HAR2 1447 aa22.94■■□□□ 1.26
LEMD2-213ENST00000514636 C8orf37Q96NL8 207 aa22.93■■□□□ 1.26
LEMD2-213ENST00000514636 NGLY1Q96IV0 654 aa22.92■■□□□ 1.26
LEMD2-213ENST00000514636 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
LEMD2-213ENST00000514636 NUTM2DQ5VT03 806 aaPredicted RBP22.91■■□□□ 1.26
LEMD2-213ENST00000514636 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
LEMD2-213ENST00000514636 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
LEMD2-213ENST00000514636 METP08581 1390 aa22.88■■□□□ 1.25
LEMD2-213ENST00000514636 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
LEMD2-213ENST00000514636 PTCH1Q13635 1447 aa22.87■■□□□ 1.25
LEMD2-213ENST00000514636 SOS2Q07890 1332 aaPredicted RBP22.86■■□□□ 1.25
LEMD2-213ENST00000514636 ATRNO75882 1429 aa22.86■■□□□ 1.25
LEMD2-213ENST00000514636 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
LEMD2-213ENST00000514636 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
LEMD2-213ENST00000514636 ZRANB1Q9UGI0 708 aa22.85■■□□□ 1.25
LEMD2-213ENST00000514636 COL22A1Q8NFW1 1626 aaPredicted RBP22.84■■□□□ 1.25
LEMD2-213ENST00000514636 FOXD1Q16676 465 aa22.84■■□□□ 1.25
LEMD2-213ENST00000514636 PRAG1Q86YV5 1406 aa22.83■■□□□ 1.25
LEMD2-213ENST00000514636 CCDC125Q86Z20 511 aa22.83■■□□□ 1.25
LEMD2-213ENST00000514636 TRPC5Q9UL62 973 aaPredicted RBP22.83■■□□□ 1.25
LEMD2-213ENST00000514636 ROCK1Q13464 1354 aa22.82■■□□□ 1.24
LEMD2-213ENST00000514636 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
LEMD2-213ENST00000514636 USP21Q9UK80 565 aa22.8■■□□□ 1.24
LEMD2-213ENST00000514636 APLP2Q06481 763 aa22.79■■□□□ 1.24
LEMD2-213ENST00000514636 MYOM2P54296 1465 aa22.79■■□□□ 1.24
LEMD2-213ENST00000514636 ADAMTS2O95450 1211 aa22.78■■□□□ 1.24
LEMD2-213ENST00000514636 BCL9LQ86UU0 1499 aa22.77■■□□□ 1.24
LEMD2-213ENST00000514636 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
LEMD2-213ENST00000514636 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
LEMD2-213ENST00000514636 NUP155O75694 1391 aa22.73■■□□□ 1.23
LEMD2-213ENST00000514636 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
LEMD2-213ENST00000514636 ORAI2Q96SN7 254 aa22.71■■□□□ 1.23
LEMD2-213ENST00000514636 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.69■■□□□ 1.22
LEMD2-213ENST00000514636 ROBO2Q9HCK4 1378 aa22.69■■□□□ 1.22
LEMD2-213ENST00000514636 LRP5O75197 1615 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms