RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
SSBP2-218ENST00000514493 AEBP2Q6ZN18 517 aaPredicted RBP28■■■□□ 2.07
SSBP2-218ENST00000514493 LAMC1P11047 1609 aa27.99■■■□□ 2.07
SSBP2-218ENST00000514493 RPGRIP1LQ68CZ1 1315 aa27.99■■■□□ 2.07
SSBP2-218ENST00000514493 UBR1Q8IWV7 1749 aa27.98■■■□□ 2.07
SSBP2-218ENST00000514493 NLRP1Q9C000 1473 aa27.98■■■□□ 2.07
SSBP2-218ENST00000514493 A2ML1A8K2U0 1454 aa27.97■■■□□ 2.07
SSBP2-218ENST00000514493 MYO3AQ8NEV4 1616 aa27.96■■■□□ 2.07
SSBP2-218ENST00000514493 GPRASP1Q5JY77 1395 aa27.92■■■□□ 2.06
SSBP2-218ENST00000514493 ROCK2O75116 1388 aaKnown RBP27.92■■■□□ 2.06
SSBP2-218ENST00000514493 ZFYVE9O95405 1425 aa27.91■■■□□ 2.06
SSBP2-218ENST00000514493 PIK3C2GO75747 1445 aa27.9■■■□□ 2.06
SSBP2-218ENST00000514493 ADGRF5Q8IZF2 1346 aa27.9■■■□□ 2.06
SSBP2-218ENST00000514493 STAG3Q9UJ98 1225 aa27.89■■■□□ 2.06
SSBP2-218ENST00000514493 SETD1BQ9UPS6 1966 aaKnown RBP27.86■■■□□ 2.05
SSBP2-218ENST00000514493 EIF4G2P78344 907 aaKnown RBP eCLIP27.86■■■□□ 2.05
SSBP2-218ENST00000514493 IQGAP1P46940 1657 aa27.86■■■□□ 2.05
SSBP2-218ENST00000514493 ZNF142P52746 1687 aaPredicted RBP27.86■■■□□ 2.05
SSBP2-218ENST00000514493 DIEXFQ68CQ4 756 aaKnown RBP27.86■■■□□ 2.05
SSBP2-218ENST00000514493 USP47Q96K76 1375 aa27.85■■■□□ 2.05
SSBP2-218ENST00000514493 CARD11Q9BXL7 1154 aa27.84■■■□□ 2.05
SSBP2-218ENST00000514493 SETBP1Q9Y6X0 1596 aa27.84■■■□□ 2.05
SSBP2-218ENST00000514493 HSPA5P11021 654 aaKnown RBP27.83■■■□□ 2.05
SSBP2-218ENST00000514493 RIMS2Q9UQ26 1411 aa27.83■■■□□ 2.05
SSBP2-218ENST00000514493 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
SSBP2-218ENST00000514493 VGFO15240 615 aaPredicted RBP27.82■■■□□ 2.04
SSBP2-218ENST00000514493 NBPF1Q3BBV0 1214 aa27.81■■■□□ 2.04
SSBP2-218ENST00000514493 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
SSBP2-218ENST00000514493 HIRIP3Q9BW71 556 aaPredicted RBP27.77■■■□□ 2.04
SSBP2-218ENST00000514493 TMEM2Q9UHN6 1383 aa27.76■■■□□ 2.03
SSBP2-218ENST00000514493 ADGRB1O14514 1584 aa27.76■■■□□ 2.03
SSBP2-218ENST00000514493 SLIT1O75093 1534 aa27.76■■■□□ 2.03
SSBP2-218ENST00000514493 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
SSBP2-218ENST00000514493 CFAP70Q5T0N1 1121 aa27.74■■■□□ 2.03
SSBP2-218ENST00000514493 ARHGAP23Q9P227 1491 aa27.74■■■□□ 2.03
SSBP2-218ENST00000514493 SETD1AO15047 1707 aaKnown RBP27.74■■■□□ 2.03
SSBP2-218ENST00000514493 NRXN3Q9Y4C0 1643 aa27.73■■■□□ 2.03
SSBP2-218ENST00000514493 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
SSBP2-218ENST00000514493 C14orf93Q9H972 538 aaKnown RBP27.73■■■□□ 2.03
SSBP2-218ENST00000514493 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.71■■■□□ 2.03
SSBP2-218ENST00000514493 ASXL1Q8IXJ9 1541 aa27.7■■■□□ 2.03
SSBP2-218ENST00000514493 ALKQ9UM73 1620 aa27.7■■■□□ 2.02
SSBP2-218ENST00000514493 HSPA2P54652 639 aa27.7■■■□□ 2.02
SSBP2-218ENST00000514493 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
SSBP2-218ENST00000514493 HDGFP51858 240 aaKnown RBP27.66■■■□□ 2.02
SSBP2-218ENST00000514493 EIF3AQ14152 1382 aaKnown RBP27.64■■■□□ 2.02
SSBP2-218ENST00000514493 THEMISQ8N1K5 641 aaPredicted RBP27.64■■■□□ 2.02
SSBP2-218ENST00000514493 ARHGEF28Q8N1W1 1705 aaKnown RBP27.63■■■□□ 2.01
SSBP2-218ENST00000514493 ST20-MTHFSA0A0A6YYL1 179 aa27.63■■■□□ 2.01
SSBP2-218ENST00000514493 PLEKHG1Q9ULL1 1385 aa27.6■■■□□ 2.01
SSBP2-218ENST00000514493 WASHC2AQ641Q2 1341 aa27.57■■■□□ 2
SSBP2-218ENST00000514493 LTKP29376 864 aa27.57■■■□□ 2
SSBP2-218ENST00000514493 EID1Q9Y6B2 187 aa27.57■■■□□ 2
SSBP2-218ENST00000514493 CCDC7Q96M83 1385 aa27.57■■■□□ 2
SSBP2-218ENST00000514493 QRICH2Q9H0J4 1663 aa27.56■■■□□ 2
SSBP2-218ENST00000514493 TMEM132EQ6IEE7 984 aa27.55■■■□□ 2
SSBP2-218ENST00000514493 DIP2AQ14689 1571 aa27.55■■■□□ 2
SSBP2-218ENST00000514493 C11orf95C9JLR9 678 aaPredicted RBP27.54■■■□□ 2
SSBP2-218ENST00000514493 TXNDC2Q86VQ3 553 aa27.54■■■□□ 2
SSBP2-218ENST00000514493 KNDC1Q76NI1 1749 aa27.54■■■□□ 2
SSBP2-218ENST00000514493 ADAMTS13Q76LX8 1427 aa27.53■■■□□ 2
SSBP2-218ENST00000514493 SENP3Q9H4L4 574 aaPredicted RBP27.53■■■□□ 2
SSBP2-218ENST00000514493 YTHDC2Q9H6S0 1430 aaKnown RBP27.53■■■□□ 2
SSBP2-218ENST00000514493 TESK2Q96S53 571 aa27.53■■■□□ 2
SSBP2-218ENST00000514493 KIF7Q2M1P5 1343 aa27.52■■■□□ 2
SSBP2-218ENST00000514493 MED14O60244 1454 aa27.51■■□□□ 1.99
SSBP2-218ENST00000514493 DLC1Q96QB1 1528 aa27.49■■□□□ 1.99
SSBP2-218ENST00000514493 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
SSBP2-218ENST00000514493 TRAK1Q9UPV9 953 aa27.48■■□□□ 1.99
SSBP2-218ENST00000514493 METP08581 1390 aa27.46■■□□□ 1.99
SSBP2-218ENST00000514493 LRPPRCP42704 1394 aaKnown RBP27.46■■□□□ 1.99
SSBP2-218ENST00000514493 DISP3Q9P2K9 1392 aa27.46■■□□□ 1.99
SSBP2-218ENST00000514493 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.99
SSBP2-218ENST00000514493 DDX10Q13206 875 aaKnown RBP27.45■■□□□ 1.99
SSBP2-218ENST00000514493 NCKAP5LQ9HCH0 1330 aa27.45■■□□□ 1.98
SSBP2-218ENST00000514493 BCANQ96GW7 911 aa27.44■■□□□ 1.98
SSBP2-218ENST00000514493 CPS1P31327 1500 aa27.44■■□□□ 1.98
SSBP2-218ENST00000514493 TMF1P82094 1093 aa27.43■■□□□ 1.98
SSBP2-218ENST00000514493 ANKLE2Q86XL3 938 aa27.42■■□□□ 1.98
SSBP2-218ENST00000514493 TECPR2O15040 1411 aa27.42■■□□□ 1.98
SSBP2-218ENST00000514493 ABCC11Q96J66 1382 aa27.41■■□□□ 1.98
SSBP2-218ENST00000514493 MIER1Q8N108 512 aa27.4■■□□□ 1.98
SSBP2-218ENST00000514493 STRCQ7RTU9 1775 aa27.4■■□□□ 1.98
SSBP2-218ENST00000514493 STK26Q9P289 416 aa27.4■■□□□ 1.98
SSBP2-218ENST00000514493 SLC24A1O60721 1099 aa27.39■■□□□ 1.98
SSBP2-218ENST00000514493 XRN1Q8IZH2 1706 aaKnown RBP27.37■■□□□ 1.97
SSBP2-218ENST00000514493 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
SSBP2-218ENST00000514493 MYOM1P52179 1685 aa27.36■■□□□ 1.97
SSBP2-218ENST00000514493 NPHP4O75161 1426 aaPredicted RBP27.35■■□□□ 1.97
SSBP2-218ENST00000514493 SLC26A8Q96RN1 970 aa27.35■■□□□ 1.97
SSBP2-218ENST00000514493 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
SSBP2-218ENST00000514493 FAM135BQ49AJ0 1406 aa27.33■■□□□ 1.97
SSBP2-218ENST00000514493 POLR3GLQ9BT43 218 aa27.33■■□□□ 1.97
SSBP2-218ENST00000514493 PTPRUQ92729 1446 aa27.33■■□□□ 1.97
SSBP2-218ENST00000514493 CHD2O14647 1828 aaKnown RBP27.32■■□□□ 1.96
SSBP2-218ENST00000514493 PIK3R4Q99570 1358 aa27.32■■□□□ 1.96
SSBP2-218ENST00000514493 CDCA8Q53HL2 280 aa27.32■■□□□ 1.96
SSBP2-218ENST00000514493 PRAM1Q96QH2 718 aa27.31■■□□□ 1.96
SSBP2-218ENST00000514493 PTCH1Q13635 1447 aa27.29■■□□□ 1.96
SSBP2-218ENST00000514493 SIRT1Q96EB6 747 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms