RNA–Protein interactions for RNA: ENST00000514095.5

PAPD4-215, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-215ENST00000514095 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
PAPD4-215ENST00000514095 TMEM131LA2VDJ0 1609 aa22.26■■□□□ 1.15
PAPD4-215ENST00000514095 ZFYVE9O95405 1425 aa22.24■■□□□ 1.15
PAPD4-215ENST00000514095 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.24■■□□□ 1.15
PAPD4-215ENST00000514095 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
PAPD4-215ENST00000514095 KCNA6P17658 529 aa22.23■■□□□ 1.15
PAPD4-215ENST00000514095 NAIPQ13075 1403 aa22.23■■□□□ 1.15
PAPD4-215ENST00000514095 HSPA1LP34931 641 aa22.22■■□□□ 1.15
PAPD4-215ENST00000514095 PLEKHG1Q9ULL1 1385 aa22.22■■□□□ 1.15
PAPD4-215ENST00000514095 ALKQ9UM73 1620 aa22.19■■□□□ 1.14
PAPD4-215ENST00000514095 NUTM2DQ5VT03 806 aaPredicted RBP22.18■■□□□ 1.14
PAPD4-215ENST00000514095 PROSER2Q86WR7 435 aaPredicted RBP22.18■■□□□ 1.14
PAPD4-215ENST00000514095 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
PAPD4-215ENST00000514095 SPHKAPQ2M3C7 1700 aa22.17■■□□□ 1.14
PAPD4-215ENST00000514095 HFM1A2PYH4 1435 aa22.17■■□□□ 1.14
PAPD4-215ENST00000514095 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
PAPD4-215ENST00000514095 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
PAPD4-215ENST00000514095 TBX22Q9Y458 520 aa22.14■■□□□ 1.13
PAPD4-215ENST00000514095 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
PAPD4-215ENST00000514095 NWD1Q149M9 1564 aa22.13■■□□□ 1.13
PAPD4-215ENST00000514095 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
PAPD4-215ENST00000514095 RBM33Q96EV2 1170 aaKnown RBP22.12■■□□□ 1.13
PAPD4-215ENST00000514095 CHD2O14647 1828 aaKnown RBP22.1■■□□□ 1.13
PAPD4-215ENST00000514095 SLC4A1APQ9BWU0 796 aaKnown RBP22.09■■□□□ 1.13
PAPD4-215ENST00000514095 DIP2AQ14689 1571 aa22.08■■□□□ 1.13
PAPD4-215ENST00000514095 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
PAPD4-215ENST00000514095 TRPM2O94759 1503 aa22.07■■□□□ 1.12
PAPD4-215ENST00000514095 MSH6P52701 1360 aa22.07■■□□□ 1.12
PAPD4-215ENST00000514095 ILDR2Q71H61 639 aa22.06■■□□□ 1.12
PAPD4-215ENST00000514095 CLTCL1P53675 1640 aa22.06■■□□□ 1.12
PAPD4-215ENST00000514095 PIK3R4Q99570 1358 aa22.05■■□□□ 1.12
PAPD4-215ENST00000514095 C14orf37Q86TY3 774 aa22.03■■□□□ 1.12
PAPD4-215ENST00000514095 FAM135BQ49AJ0 1406 aa22.03■■□□□ 1.12
PAPD4-215ENST00000514095 KIF1BO60333 1816 aa22.03■■□□□ 1.12
PAPD4-215ENST00000514095 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
PAPD4-215ENST00000514095 MED1Q15648 1581 aaPredicted RBP21.99■■□□□ 1.11
PAPD4-215ENST00000514095 NCOA3Q9Y6Q9 1424 aa21.99■■□□□ 1.11
PAPD4-215ENST00000514095 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
PAPD4-215ENST00000514095 SETBP1Q9Y6X0 1596 aa21.98■■□□□ 1.11
PAPD4-215ENST00000514095 NEXMIFQ5QGS0 1516 aa21.97■■□□□ 1.11
PAPD4-215ENST00000514095 ROBO1Q9Y6N7 1651 aa21.97■■□□□ 1.11
PAPD4-215ENST00000514095 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
PAPD4-215ENST00000514095 FOXD1Q16676 465 aa21.95■■□□□ 1.1
PAPD4-215ENST00000514095 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
PAPD4-215ENST00000514095 VGFO15240 615 aaPredicted RBP21.94■■□□□ 1.1
PAPD4-215ENST00000514095 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
PAPD4-215ENST00000514095 C19orf44Q9H6X5 657 aa21.94■■□□□ 1.1
PAPD4-215ENST00000514095 ATF3P18847 181 aa21.93■■□□□ 1.1
PAPD4-215ENST00000514095 MPHOSPH9Q99550 1183 aa21.93■■□□□ 1.1
PAPD4-215ENST00000514095 RPGRIP1LQ68CZ1 1315 aa21.92■■□□□ 1.1
PAPD4-215ENST00000514095 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
PAPD4-215ENST00000514095 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
PAPD4-215ENST00000514095 METP08581 1390 aa21.91■■□□□ 1.1
PAPD4-215ENST00000514095 SOCS7O14512 581 aa21.91■■□□□ 1.1
PAPD4-215ENST00000514095 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.1
PAPD4-215ENST00000514095 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.1
PAPD4-215ENST00000514095 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.89■■□□□ 1.1
PAPD4-215ENST00000514095 XRN1Q8IZH2 1706 aaKnown RBP21.89■■□□□ 1.09
PAPD4-215ENST00000514095 PHLPP1O60346 1717 aa21.85■■□□□ 1.09
PAPD4-215ENST00000514095 PPLO60437 1756 aa21.84■■□□□ 1.09
PAPD4-215ENST00000514095 RGL3Q3MIN7 710 aa21.83■■□□□ 1.09
PAPD4-215ENST00000514095 DCCP43146 1447 aa21.82■■□□□ 1.08
PAPD4-215ENST00000514095 RAB3GAP2Q9H2M9 1393 aa21.79■■□□□ 1.08
PAPD4-215ENST00000514095 JCADQ9P266 1359 aa21.78■■□□□ 1.08
PAPD4-215ENST00000514095 SPATA31E1Q6ZUB1 1445 aa21.78■■□□□ 1.08
PAPD4-215ENST00000514095 ADGRL3Q9HAR2 1447 aa21.78■■□□□ 1.08
PAPD4-215ENST00000514095 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
PAPD4-215ENST00000514095 ANKRD30BQ9BXX2 1392 aa21.77■■□□□ 1.08
PAPD4-215ENST00000514095 BRINP3Q76B58 766 aa21.77■■□□□ 1.08
PAPD4-215ENST00000514095 PTCH1Q13635 1447 aa21.76■■□□□ 1.07
PAPD4-215ENST00000514095 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
PAPD4-215ENST00000514095 COL16A1Q07092 1604 aaPredicted RBP21.75■■□□□ 1.07
PAPD4-215ENST00000514095 ROBO2Q9HCK4 1378 aa21.74■■□□□ 1.07
PAPD4-215ENST00000514095 MST1RQ04912 1400 aa21.74■■□□□ 1.07
PAPD4-215ENST00000514095 AHDC1Q5TGY3 1603 aaPredicted RBP21.74■■□□□ 1.07
PAPD4-215ENST00000514095 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
PAPD4-215ENST00000514095 RGS17Q9UGC6 210 aaPredicted RBP21.71■■□□□ 1.07
PAPD4-215ENST00000514095 IFT172Q9UG01 1749 aa21.71■■□□□ 1.07
PAPD4-215ENST00000514095 ASXL1Q8IXJ9 1541 aa21.7■■□□□ 1.07
PAPD4-215ENST00000514095 PRAG1Q86YV5 1406 aa21.7■■□□□ 1.06
PAPD4-215ENST00000514095 STK26Q9P289 416 aa21.68■■□□□ 1.06
PAPD4-215ENST00000514095 SPATA31A6Q5VVP1 1343 aa21.68■■□□□ 1.06
PAPD4-215ENST00000514095 PIK3C2GO75747 1445 aa21.66■■□□□ 1.06
PAPD4-215ENST00000514095 MEX3CQ5U5Q3 659 aaKnown RBP21.66■■□□□ 1.06
PAPD4-215ENST00000514095 HRCP23327 699 aa21.65■■□□□ 1.06
PAPD4-215ENST00000514095 TMEM132EQ6IEE7 984 aa21.65■■□□□ 1.06
PAPD4-215ENST00000514095 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.06
PAPD4-215ENST00000514095 SHPRHQ149N8 1683 aa21.64■■□□□ 1.05
PAPD4-215ENST00000514095 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
PAPD4-215ENST00000514095 NHSL1Q5SYE7 1610 aa21.63■■□□□ 1.05
PAPD4-215ENST00000514095 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
PAPD4-215ENST00000514095 DDX17Q92841 729 aaKnown RBP21.62■■□□□ 1.05
PAPD4-215ENST00000514095 POTEAQ6S8J7 498 aa21.61■■□□□ 1.05
PAPD4-215ENST00000514095 WAPLQ7Z5K2 1190 aa21.61■■□□□ 1.05
PAPD4-215ENST00000514095 TECPR2O15040 1411 aa21.61■■□□□ 1.05
PAPD4-215ENST00000514095 ABCC11Q96J66 1382 aa21.61■■□□□ 1.05
PAPD4-215ENST00000514095 MYOM2P54296 1465 aa21.6■■□□□ 1.05
PAPD4-215ENST00000514095 NUTM2BA6NNL0 878 aaPredicted RBP21.6■■□□□ 1.05
PAPD4-215ENST00000514095 NUTM2EB1AL46 878 aaPredicted RBP21.6■■□□□ 1.05
PAPD4-215ENST00000514095 NUTM2AQ8IVF1 878 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms