RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 WASHC2CQ9Y4E1 1318 aa16.72■□□□□ 0.27
SDHA-216ENST00000514027 PTPRTO14522 1441 aa16.72■□□□□ 0.27
SDHA-216ENST00000514027 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
SDHA-216ENST00000514027 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
SDHA-216ENST00000514027 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
SDHA-216ENST00000514027 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
SDHA-216ENST00000514027 UGGT1Q9NYU2 1555 aa16.69■□□□□ 0.26
SDHA-216ENST00000514027 KNSTRNQ9Y448 316 aa16.68■□□□□ 0.26
SDHA-216ENST00000514027 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
SDHA-216ENST00000514027 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
SDHA-216ENST00000514027 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
SDHA-216ENST00000514027 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
SDHA-216ENST00000514027 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
SDHA-216ENST00000514027 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
SDHA-216ENST00000514027 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
SDHA-216ENST00000514027 CDCA8Q53HL2 280 aa16.65■□□□□ 0.26
SDHA-216ENST00000514027 PKNOX2Q96KN3 472 aa16.65■□□□□ 0.26
SDHA-216ENST00000514027 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
SDHA-216ENST00000514027 KCNA4P22459 653 aa16.65■□□□□ 0.26
SDHA-216ENST00000514027 SYNMO15061 1565 aa16.64■□□□□ 0.26
SDHA-216ENST00000514027 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
SDHA-216ENST00000514027 KIDINS220Q9ULH0 1771 aa16.63■□□□□ 0.25
SDHA-216ENST00000514027 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
SDHA-216ENST00000514027 KIF1BO60333 1816 aa16.62■□□□□ 0.25
SDHA-216ENST00000514027 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
SDHA-216ENST00000514027 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
SDHA-216ENST00000514027 ABCA6Q8N139 1617 aa16.61■□□□□ 0.25
SDHA-216ENST00000514027 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
SDHA-216ENST00000514027 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
SDHA-216ENST00000514027 MYOM1P52179 1685 aa16.61■□□□□ 0.25
SDHA-216ENST00000514027 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
SDHA-216ENST00000514027 MAP3K4Q9Y6R4 1608 aa16.61■□□□□ 0.25
SDHA-216ENST00000514027 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
SDHA-216ENST00000514027 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
SDHA-216ENST00000514027 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
SDHA-216ENST00000514027 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
SDHA-216ENST00000514027 ADAMTS8Q9UP79 889 aa16.61■□□□□ 0.25
SDHA-216ENST00000514027 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
SDHA-216ENST00000514027 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
SDHA-216ENST00000514027 KIAA1210Q9ULL0 1709 aa16.6■□□□□ 0.25
SDHA-216ENST00000514027 MROH2AA6NES4 1674 aa16.6■□□□□ 0.25
SDHA-216ENST00000514027 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
SDHA-216ENST00000514027 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
SDHA-216ENST00000514027 ASXL1Q8IXJ9 1541 aa16.59■□□□□ 0.25
SDHA-216ENST00000514027 MYOM2P54296 1465 aa16.58■□□□□ 0.24
SDHA-216ENST00000514027 INSRP06213 1382 aa16.58■□□□□ 0.24
SDHA-216ENST00000514027 NEURL4Q96JN8 1562 aa16.57■□□□□ 0.24
SDHA-216ENST00000514027 PLIN1O60240 522 aa16.56■□□□□ 0.24
SDHA-216ENST00000514027 GGT6Q6P531 493 aa16.56■□□□□ 0.24
SDHA-216ENST00000514027 IFT172Q9UG01 1749 aa16.55■□□□□ 0.24
SDHA-216ENST00000514027 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
SDHA-216ENST00000514027 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
SDHA-216ENST00000514027 NOS1P29475 1434 aa16.54■□□□□ 0.24
SDHA-216ENST00000514027 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
SDHA-216ENST00000514027 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
SDHA-216ENST00000514027 CFAP74Q9C0B2 1584 aa16.52■□□□□ 0.24
SDHA-216ENST00000514027 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.24
SDHA-216ENST00000514027 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
SDHA-216ENST00000514027 ADGRB3O60242 1522 aa16.51■□□□□ 0.23
SDHA-216ENST00000514027 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
SDHA-216ENST00000514027 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
SDHA-216ENST00000514027 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
SDHA-216ENST00000514027 NPATQ14207 1427 aa16.5■□□□□ 0.23
SDHA-216ENST00000514027 FRMPD1Q5SYB0 1578 aa16.5■□□□□ 0.23
SDHA-216ENST00000514027 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
SDHA-216ENST00000514027 CRBNQ96SW2 442 aa16.49■□□□□ 0.23
SDHA-216ENST00000514027 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
SDHA-216ENST00000514027 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
SDHA-216ENST00000514027 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
SDHA-216ENST00000514027 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
SDHA-216ENST00000514027 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
SDHA-216ENST00000514027 CENPJQ9HC77 1338 aaPredicted RBP16.48■□□□□ 0.23
SDHA-216ENST00000514027 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
SDHA-216ENST00000514027 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
SDHA-216ENST00000514027 ANP32AP39687 249 aaKnown RBP16.46■□□□□ 0.23
SDHA-216ENST00000514027 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
SDHA-216ENST00000514027 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
SDHA-216ENST00000514027 PPLO60437 1756 aa16.46■□□□□ 0.22
SDHA-216ENST00000514027 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
SDHA-216ENST00000514027 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
SDHA-216ENST00000514027 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
SDHA-216ENST00000514027 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
SDHA-216ENST00000514027 C20orf194Q5TEA3 1177 aa16.44■□□□□ 0.22
SDHA-216ENST00000514027 ABCC3O15438 1527 aa16.44■□□□□ 0.22
SDHA-216ENST00000514027 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
SDHA-216ENST00000514027 SETBP1Q9Y6X0 1596 aa16.44■□□□□ 0.22
SDHA-216ENST00000514027 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
SDHA-216ENST00000514027 APAF1O14727 1248 aa16.42■□□□□ 0.22
SDHA-216ENST00000514027 CAMSAP1Q5T5Y3 1602 aa16.42■□□□□ 0.22
SDHA-216ENST00000514027 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
SDHA-216ENST00000514027 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
SDHA-216ENST00000514027 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
SDHA-216ENST00000514027 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
SDHA-216ENST00000514027 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
SDHA-216ENST00000514027 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
SDHA-216ENST00000514027 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
SDHA-216ENST00000514027 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
SDHA-216ENST00000514027 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
SDHA-216ENST00000514027 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
SDHA-216ENST00000514027 ADGRB1O14514 1584 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms