RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
DDX60-205ENST00000513997 MARVELD3Q96A59 401 aa13.33□□□□□ -0.28
DDX60-205ENST00000513997 ZNF330Q9Y3S2 320 aaPredicted RBP13.33□□□□□ -0.28
DDX60-205ENST00000513997 ERBB3P21860 1342 aa13.33□□□□□ -0.28
DDX60-205ENST00000513997 KCNA1Q09470 495 aa13.32□□□□□ -0.28
DDX60-205ENST00000513997 PTPREP23469 700 aa13.31□□□□□ -0.28
DDX60-205ENST00000513997 EMP3P54852 163 aa13.31□□□□□ -0.28
DDX60-205ENST00000513997 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
DDX60-205ENST00000513997 SPDYE5A6NIY4 337 aa13.3□□□□□ -0.28
DDX60-205ENST00000513997 COL9A1P20849 921 aa13.3□□□□□ -0.28
DDX60-205ENST00000513997 SKIV2LQ15477 1246 aaKnown RBP13.3□□□□□ -0.28
DDX60-205ENST00000513997 LCE2DQ5TA82 110 aaPredicted RBP13.29□□□□□ -0.28
DDX60-205ENST00000513997 BRD1O95696 1058 aa13.27□□□□□ -0.29
DDX60-205ENST00000513997 PRSS12P56730 875 aa13.27□□□□□ -0.29
DDX60-205ENST00000513997 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
DDX60-205ENST00000513997 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
DDX60-205ENST00000513997 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
DDX60-205ENST00000513997 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
DDX60-205ENST00000513997 REPIN1Q9BWE0 567 aaKnown RBP13.26□□□□□ -0.29
DDX60-205ENST00000513997 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
DDX60-205ENST00000513997 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
DDX60-205ENST00000513997 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
DDX60-205ENST00000513997 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
DDX60-205ENST00000513997 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
DDX60-205ENST00000513997 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
DDX60-205ENST00000513997 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
DDX60-205ENST00000513997 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
DDX60-205ENST00000513997 PROCA1Q8NCQ7 364 aaPredicted RBP13.22□□□□□ -0.29
DDX60-205ENST00000513997 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
DDX60-205ENST00000513997 FAM198AQ9UFP1 575 aa13.21□□□□□ -0.29
DDX60-205ENST00000513997 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
DDX60-205ENST00000513997 PSEN2P49810 448 aa13.2□□□□□ -0.3
DDX60-205ENST00000513997 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
DDX60-205ENST00000513997 FAM161AQ3B820 660 aa13.2□□□□□ -0.3
DDX60-205ENST00000513997 HS3ST6Q96QI5 342 aa13.2□□□□□ -0.3
DDX60-205ENST00000513997 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
DDX60-205ENST00000513997 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
DDX60-205ENST00000513997 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
DDX60-205ENST00000513997 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
DDX60-205ENST00000513997 BANK1Q8NDB2 785 aa13.18□□□□□ -0.3
DDX60-205ENST00000513997 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
DDX60-205ENST00000513997 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
DDX60-205ENST00000513997 USTQ9Y2C2 406 aa13.18□□□□□ -0.3
DDX60-205ENST00000513997 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
DDX60-205ENST00000513997 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
DDX60-205ENST00000513997 SNRKQ9NRH2 765 aa13.17□□□□□ -0.3
DDX60-205ENST00000513997 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
DDX60-205ENST00000513997 OATP04181 439 aa13.16□□□□□ -0.3
DDX60-205ENST00000513997 PBX2P40425 430 aa13.16□□□□□ -0.3
DDX60-205ENST00000513997 PROX2Q3B8N5 592 aa13.16□□□□□ -0.3
DDX60-205ENST00000513997 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
DDX60-205ENST00000513997 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
DDX60-205ENST00000513997 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
DDX60-205ENST00000513997 DMRTA1Q5VZB9 504 aa13.14□□□□□ -0.31
DDX60-205ENST00000513997 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
DDX60-205ENST00000513997 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX60-205ENST00000513997 CLCN1P35523 988 aa13.13□□□□□ -0.31
DDX60-205ENST00000513997 PBXIP1Q96AQ6 731 aa13.13□□□□□ -0.31
DDX60-205ENST00000513997 C3orf80F5H4A9 247 aa13.12□□□□□ -0.31
DDX60-205ENST00000513997 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
DDX60-205ENST00000513997 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
DDX60-205ENST00000513997 SND1Q7KZF4 910 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX60-205ENST00000513997 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
DDX60-205ENST00000513997 EYA1Q99502 592 aa13.11□□□□□ -0.31
DDX60-205ENST00000513997 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
DDX60-205ENST00000513997 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
DDX60-205ENST00000513997 GLMNQ92990 594 aa13.1□□□□□ -0.31
DDX60-205ENST00000513997 NUDT18Q6ZVK8 323 aa13.09□□□□□ -0.31
DDX60-205ENST00000513997 TATDN2Q93075 761 aa13.09□□□□□ -0.31
DDX60-205ENST00000513997 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
DDX60-205ENST00000513997 KIAA1468Q9P260 1216 aa13.09□□□□□ -0.31
DDX60-205ENST00000513997 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
DDX60-205ENST00000513997 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
DDX60-205ENST00000513997 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
DDX60-205ENST00000513997 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
DDX60-205ENST00000513997 BEGAINQ9BUH8 593 aa13.08□□□□□ -0.32
DDX60-205ENST00000513997 GDPD2Q9HCC8 539 aa13.08□□□□□ -0.32
DDX60-205ENST00000513997 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
DDX60-205ENST00000513997 RFC5P40937 340 aa13.07□□□□□ -0.32
DDX60-205ENST00000513997 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
DDX60-205ENST00000513997 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
DDX60-205ENST00000513997 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
DDX60-205ENST00000513997 IGSF5Q9NSI5 407 aa13.06□□□□□ -0.32
DDX60-205ENST00000513997 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
DDX60-205ENST00000513997 VPS9D1Q9Y2B5 631 aa13.06□□□□□ -0.32
DDX60-205ENST00000513997 UNCXA6NJT0 531 aa13.05□□□□□ -0.32
DDX60-205ENST00000513997 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
DDX60-205ENST00000513997 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
DDX60-205ENST00000513997 SMAPO00193 183 aa13.04□□□□□ -0.32
DDX60-205ENST00000513997 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
DDX60-205ENST00000513997 TMEM259Q4ZIN3 620 aa13.03□□□□□ -0.32
DDX60-205ENST00000513997 MYSM1Q5VVJ2 828 aa13.03□□□□□ -0.32
DDX60-205ENST00000513997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
DDX60-205ENST00000513997 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.01□□□□□ -0.33
DDX60-205ENST00000513997 TK2O00142 265 aa13.01□□□□□ -0.33
DDX60-205ENST00000513997 CLK2P49760 499 aaKnown RBP13.01□□□□□ -0.33
DDX60-205ENST00000513997 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDX60-205ENST00000513997 MTMR14Q8NCE2 650 aa13.01□□□□□ -0.33
DDX60-205ENST00000513997 DNAJB2P25686 324 aa12.99□□□□□ -0.33
DDX60-205ENST00000513997 ABL2P42684 1182 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms