RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 NEXMIFQ5QGS0 1516 aa16.54■□□□□ 0.24
HTT-213ENST00000513806 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
HTT-213ENST00000513806 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
HTT-213ENST00000513806 NEURL4Q96JN8 1562 aa16.53■□□□□ 0.24
HTT-213ENST00000513806 SLIT1O75093 1534 aa16.53■□□□□ 0.24
HTT-213ENST00000513806 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.24
HTT-213ENST00000513806 ZFYVE9O95405 1425 aa16.52■□□□□ 0.23
HTT-213ENST00000513806 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
HTT-213ENST00000513806 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
HTT-213ENST00000513806 SCAF11Q99590 1463 aaKnown RBP16.48■□□□□ 0.23
HTT-213ENST00000513806 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
HTT-213ENST00000513806 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
HTT-213ENST00000513806 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
HTT-213ENST00000513806 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
HTT-213ENST00000513806 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
HTT-213ENST00000513806 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
HTT-213ENST00000513806 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
HTT-213ENST00000513806 BCANQ96GW7 911 aa16.44■□□□□ 0.22
HTT-213ENST00000513806 NPHP4O75161 1426 aaPredicted RBP16.44■□□□□ 0.22
HTT-213ENST00000513806 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
HTT-213ENST00000513806 MED14O60244 1454 aa16.42■□□□□ 0.22
HTT-213ENST00000513806 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.41■□□□□ 0.22
HTT-213ENST00000513806 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
HTT-213ENST00000513806 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
HTT-213ENST00000513806 RPGRIP1LQ68CZ1 1315 aa16.41■□□□□ 0.22
HTT-213ENST00000513806 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
HTT-213ENST00000513806 STRCP1A6NGW2 1772 aa16.39■□□□□ 0.21
HTT-213ENST00000513806 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
HTT-213ENST00000513806 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
HTT-213ENST00000513806 MYOM2P54296 1465 aa16.38■□□□□ 0.21
HTT-213ENST00000513806 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
HTT-213ENST00000513806 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
HTT-213ENST00000513806 VGFO15240 615 aaPredicted RBP16.37■□□□□ 0.21
HTT-213ENST00000513806 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
HTT-213ENST00000513806 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
HTT-213ENST00000513806 PIK3C2GO75747 1445 aa16.36■□□□□ 0.21
HTT-213ENST00000513806 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
HTT-213ENST00000513806 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
HTT-213ENST00000513806 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
HTT-213ENST00000513806 ASXL1Q8IXJ9 1541 aa16.34■□□□□ 0.21
HTT-213ENST00000513806 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.2
HTT-213ENST00000513806 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
HTT-213ENST00000513806 METP08581 1390 aa16.32■□□□□ 0.2
HTT-213ENST00000513806 TMEM132EQ6IEE7 984 aa16.32■□□□□ 0.2
HTT-213ENST00000513806 PRAG1Q86YV5 1406 aa16.32■□□□□ 0.2
HTT-213ENST00000513806 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
HTT-213ENST00000513806 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
HTT-213ENST00000513806 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
HTT-213ENST00000513806 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
HTT-213ENST00000513806 LAMC1P11047 1609 aa16.3■□□□□ 0.2
HTT-213ENST00000513806 KIAA1210Q9ULL0 1709 aa16.28■□□□□ 0.2
HTT-213ENST00000513806 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
HTT-213ENST00000513806 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
HTT-213ENST00000513806 XIRP1Q702N8 1843 aaKnown RBP16.27■□□□□ 0.2
HTT-213ENST00000513806 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
HTT-213ENST00000513806 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
HTT-213ENST00000513806 STK26Q9P289 416 aa16.27■□□□□ 0.2
HTT-213ENST00000513806 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
HTT-213ENST00000513806 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
HTT-213ENST00000513806 LTBP4Q8N2S1 1624 aa16.26■□□□□ 0.19
HTT-213ENST00000513806 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
HTT-213ENST00000513806 AMOTL2Q9Y2J4 779 aa16.24■□□□□ 0.19
HTT-213ENST00000513806 KNDC1Q76NI1 1749 aa16.23■□□□□ 0.19
HTT-213ENST00000513806 KCNA6P17658 529 aa16.23■□□□□ 0.19
HTT-213ENST00000513806 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
HTT-213ENST00000513806 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
HTT-213ENST00000513806 YTHDC2Q9H6S0 1430 aaKnown RBP16.21■□□□□ 0.19
HTT-213ENST00000513806 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
HTT-213ENST00000513806 RALGAPBQ86X10 1494 aa16.2■□□□□ 0.18
HTT-213ENST00000513806 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
HTT-213ENST00000513806 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
HTT-213ENST00000513806 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
HTT-213ENST00000513806 ROBO2Q9HCK4 1378 aa16.19■□□□□ 0.18
HTT-213ENST00000513806 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
HTT-213ENST00000513806 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
HTT-213ENST00000513806 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
HTT-213ENST00000513806 WAPLQ7Z5K2 1190 aa16.18■□□□□ 0.18
HTT-213ENST00000513806 CPS1P31327 1500 aa16.18■□□□□ 0.18
HTT-213ENST00000513806 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
HTT-213ENST00000513806 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
HTT-213ENST00000513806 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
HTT-213ENST00000513806 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
HTT-213ENST00000513806 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
HTT-213ENST00000513806 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
HTT-213ENST00000513806 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.17
HTT-213ENST00000513806 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
HTT-213ENST00000513806 TECPR2O15040 1411 aa16.13■□□□□ 0.17
HTT-213ENST00000513806 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
HTT-213ENST00000513806 CARD11Q9BXL7 1154 aa16.13■□□□□ 0.17
HTT-213ENST00000513806 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
HTT-213ENST00000513806 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
HTT-213ENST00000513806 GPRASP1Q5JY77 1395 aa16.12■□□□□ 0.17
HTT-213ENST00000513806 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
HTT-213ENST00000513806 CERKQ8TCT0 537 aa16.1■□□□□ 0.17
HTT-213ENST00000513806 POGKQ9P215 609 aa16.1■□□□□ 0.17
HTT-213ENST00000513806 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
HTT-213ENST00000513806 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.17
HTT-213ENST00000513806 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
HTT-213ENST00000513806 FAM135BQ49AJ0 1406 aa16.07■□□□□ 0.16
HTT-213ENST00000513806 ADGRL3Q9HAR2 1447 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms