RNA–Protein interactions for RNA: ENST00000513780.5

BACE1-209, Transcript of beta-secretase 1, humanhuman

TSL 1 (best) BASIC

Gene BACE1, Length 1,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-209ENST00000513780 STAG3Q9UJ98 1225 aa28.68■■■□□ 2.18
BACE1-209ENST00000513780 PLPPR3Q6T4P5 718 aa28.67■■■□□ 2.18
BACE1-209ENST00000513780 SETD1BQ9UPS6 1966 aaKnown RBP28.67■■■□□ 2.18
BACE1-209ENST00000513780 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
BACE1-209ENST00000513780 PTPRMP28827 1452 aa28.66■■■□□ 2.18
BACE1-209ENST00000513780 KIAA1210Q9ULL0 1709 aa28.66■■■□□ 2.18
BACE1-209ENST00000513780 ZFYVE9O95405 1425 aa28.62■■■□□ 2.17
BACE1-209ENST00000513780 ADGRF5Q8IZF2 1346 aa28.61■■■□□ 2.17
BACE1-209ENST00000513780 LAMC1P11047 1609 aa28.59■■■□□ 2.17
BACE1-209ENST00000513780 VGFO15240 615 aaPredicted RBP28.59■■■□□ 2.17
BACE1-209ENST00000513780 ZNF142P52746 1687 aaPredicted RBP28.58■■■□□ 2.17
BACE1-209ENST00000513780 ZNF316A6NFI3 1004 aaPredicted RBP28.58■■■□□ 2.17
BACE1-209ENST00000513780 CEP170BQ9Y4F5 1589 aaPredicted RBP28.57■■■□□ 2.16
BACE1-209ENST00000513780 PIK3C2GO75747 1445 aa28.57■■■□□ 2.16
BACE1-209ENST00000513780 RIMS2Q9UQ26 1411 aa28.57■■■□□ 2.16
BACE1-209ENST00000513780 ROCK2O75116 1388 aaKnown RBP28.57■■■□□ 2.16
BACE1-209ENST00000513780 GPRASP1Q5JY77 1395 aa28.57■■■□□ 2.16
BACE1-209ENST00000513780 EIF4G2P78344 907 aaKnown RBP eCLIP28.52■■■□□ 2.16
BACE1-209ENST00000513780 CARD11Q9BXL7 1154 aa28.52■■■□□ 2.16
BACE1-209ENST00000513780 TMEM2Q9UHN6 1383 aa28.51■■■□□ 2.15
BACE1-209ENST00000513780 NBPF1Q3BBV0 1214 aa28.51■■■□□ 2.15
BACE1-209ENST00000513780 NUTM2DQ5VT03 806 aaPredicted RBP28.51■■■□□ 2.15
BACE1-209ENST00000513780 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.5■■■□□ 2.15
BACE1-209ENST00000513780 SLIT1O75093 1534 aa28.5■■■□□ 2.15
BACE1-209ENST00000513780 SETBP1Q9Y6X0 1596 aa28.49■■■□□ 2.15
BACE1-209ENST00000513780 HDGFP51858 240 aaKnown RBP28.48■■■□□ 2.15
BACE1-209ENST00000513780 ARHGAP23Q9P227 1491 aa28.48■■■□□ 2.15
BACE1-209ENST00000513780 HSPA5P11021 654 aaKnown RBP28.47■■■□□ 2.15
BACE1-209ENST00000513780 CFAP70Q5T0N1 1121 aa28.47■■■□□ 2.15
BACE1-209ENST00000513780 KDM4FA0A1W2PPD8 638 aa28.46■■■□□ 2.15
BACE1-209ENST00000513780 THEMISQ8N1K5 641 aaPredicted RBP28.46■■■□□ 2.15
BACE1-209ENST00000513780 IQGAP1P46940 1657 aa28.46■■■□□ 2.15
BACE1-209ENST00000513780 USP47Q96K76 1375 aa28.46■■■□□ 2.15
BACE1-209ENST00000513780 C14orf93Q9H972 538 aaKnown RBP28.46■■■□□ 2.15
BACE1-209ENST00000513780 HIRIP3Q9BW71 556 aaPredicted RBP28.4■■■□□ 2.14
BACE1-209ENST00000513780 ALKQ9UM73 1620 aa28.4■■■□□ 2.14
BACE1-209ENST00000513780 NRXN3Q9Y4C0 1643 aa28.4■■■□□ 2.14
BACE1-209ENST00000513780 ADGRB1O14514 1584 aa28.4■■■□□ 2.14
BACE1-209ENST00000513780 SETD1AO15047 1707 aaKnown RBP28.39■■■□□ 2.14
BACE1-209ENST00000513780 SCAF11Q99590 1463 aaKnown RBP28.39■■■□□ 2.13
BACE1-209ENST00000513780 EID1Q9Y6B2 187 aa28.37■■■□□ 2.13
BACE1-209ENST00000513780 TXNDC2Q86VQ3 553 aa28.35■■■□□ 2.13
BACE1-209ENST00000513780 ASXL1Q8IXJ9 1541 aa28.35■■■□□ 2.13
BACE1-209ENST00000513780 PLEKHG1Q9ULL1 1385 aa28.35■■■□□ 2.13
BACE1-209ENST00000513780 LTKP29376 864 aa28.34■■■□□ 2.13
BACE1-209ENST00000513780 POLR1AO95602 1720 aaPredicted RBP28.34■■■□□ 2.13
BACE1-209ENST00000513780 ST20-MTHFSA0A0A6YYL1 179 aa28.3■■■□□ 2.12
BACE1-209ENST00000513780 TMEM132EQ6IEE7 984 aa28.29■■■□□ 2.12
BACE1-209ENST00000513780 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
BACE1-209ENST00000513780 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
BACE1-209ENST00000513780 ARHGEF28Q8N1W1 1705 aaKnown RBP28.27■■■□□ 2.12
BACE1-209ENST00000513780 ADAMTS13Q76LX8 1427 aa28.26■■■□□ 2.11
BACE1-209ENST00000513780 DIP2AQ14689 1571 aa28.24■■■□□ 2.11
BACE1-209ENST00000513780 ANKLE2Q86XL3 938 aa28.24■■■□□ 2.11
BACE1-209ENST00000513780 MED14O60244 1454 aa28.24■■■□□ 2.11
BACE1-209ENST00000513780 BCANQ96GW7 911 aa28.23■■■□□ 2.11
BACE1-209ENST00000513780 YTHDC2Q9H6S0 1430 aaKnown RBP28.23■■■□□ 2.11
BACE1-209ENST00000513780 TRAK1Q9UPV9 953 aa28.21■■■□□ 2.11
BACE1-209ENST00000513780 KNDC1Q76NI1 1749 aa28.2■■■□□ 2.1
BACE1-209ENST00000513780 METP08581 1390 aa28.18■■■□□ 2.1
BACE1-209ENST00000513780 LRPPRCP42704 1394 aaKnown RBP28.18■■■□□ 2.1
BACE1-209ENST00000513780 QRICH2Q9H0J4 1663 aa28.18■■■□□ 2.1
BACE1-209ENST00000513780 TESK2Q96S53 571 aa28.18■■■□□ 2.1
BACE1-209ENST00000513780 C11orf95C9JLR9 678 aaPredicted RBP28.17■■■□□ 2.1
BACE1-209ENST00000513780 DLC1Q96QB1 1528 aa28.17■■■□□ 2.1
BACE1-209ENST00000513780 CCDC7Q96M83 1385 aa28.17■■■□□ 2.1
BACE1-209ENST00000513780 WASHC2AQ641Q2 1341 aa28.16■■■□□ 2.1
BACE1-209ENST00000513780 TBX22Q9Y458 520 aa28.16■■■□□ 2.1
BACE1-209ENST00000513780 CENPJQ9HC77 1338 aaPredicted RBP28.15■■■□□ 2.1
BACE1-209ENST00000513780 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
BACE1-209ENST00000513780 SBNO2Q9Y2G9 1366 aa28.14■■■□□ 2.1
BACE1-209ENST00000513780 STK26Q9P289 416 aa28.14■■■□□ 2.09
BACE1-209ENST00000513780 ABCC11Q96J66 1382 aa28.13■■■□□ 2.09
BACE1-209ENST00000513780 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
BACE1-209ENST00000513780 SLC26A8Q96RN1 970 aa28.13■■■□□ 2.09
BACE1-209ENST00000513780 NPHP4O75161 1426 aaPredicted RBP28.12■■■□□ 2.09
BACE1-209ENST00000513780 SLC24A1O60721 1099 aa28.11■■■□□ 2.09
BACE1-209ENST00000513780 TECPR2O15040 1411 aa28.11■■■□□ 2.09
BACE1-209ENST00000513780 CPS1P31327 1500 aa28.11■■■□□ 2.09
BACE1-209ENST00000513780 TMF1P82094 1093 aa28.09■■■□□ 2.09
BACE1-209ENST00000513780 DIEXFQ68CQ4 756 aaKnown RBP28.09■■■□□ 2.09
BACE1-209ENST00000513780 DISP3Q9P2K9 1392 aa28.08■■■□□ 2.09
BACE1-209ENST00000513780 NCKAP5LQ9HCH0 1330 aa28.07■■■□□ 2.08
BACE1-209ENST00000513780 PIK3R4Q99570 1358 aa28.07■■■□□ 2.08
BACE1-209ENST00000513780 PTPRUQ92729 1446 aa28.06■■■□□ 2.08
BACE1-209ENST00000513780 CHD2O14647 1828 aaKnown RBP28.06■■■□□ 2.08
BACE1-209ENST00000513780 DDX10Q13206 875 aaKnown RBP28.05■■■□□ 2.08
BACE1-209ENST00000513780 XRN1Q8IZH2 1706 aaKnown RBP28.05■■■□□ 2.08
BACE1-209ENST00000513780 SIRT1Q96EB6 747 aa28.04■■■□□ 2.08
BACE1-209ENST00000513780 FAM135BQ49AJ0 1406 aa28.04■■■□□ 2.08
BACE1-209ENST00000513780 HSPA2P54652 639 aa28.03■■■□□ 2.08
BACE1-209ENST00000513780 PRAM1Q96QH2 718 aa28.03■■■□□ 2.08
BACE1-209ENST00000513780 POGKQ9P215 609 aa28.02■■■□□ 2.08
BACE1-209ENST00000513780 CDCA8Q53HL2 280 aa28.01■■■□□ 2.07
BACE1-209ENST00000513780 STRCQ7RTU9 1775 aa28■■■□□ 2.07
BACE1-209ENST00000513780 POLR3GLQ9BT43 218 aa27.99■■■□□ 2.07
BACE1-209ENST00000513780 AMOTL2Q9Y2J4 779 aa27.98■■■□□ 2.07
BACE1-209ENST00000513780 PTCH1Q13635 1447 aa27.97■■■□□ 2.07
BACE1-209ENST00000513780 TULP4Q9NRJ4 1543 aa27.97■■■□□ 2.07
BACE1-209ENST00000513780 ROBO2Q9HCK4 1378 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms