RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 WBP1LQ9NX94 342 aa5.63□□□□□ -1.51
SMN1-208ENST00000513228 TESPA1A2RU30 521 aaPredicted RBP5.62□□□□□ -1.51
SMN1-208ENST00000513228 SOWAHBA6NEL2 793 aa5.62□□□□□ -1.51
SMN1-208ENST00000513228 PPP4CP60510 307 aa5.62□□□□□ -1.51
SMN1-208ENST00000513228 XP32Q5T750 250 aa5.62□□□□□ -1.51
SMN1-208ENST00000513228 SAMD7Q7Z3H4 446 aa5.62□□□□□ -1.51
SMN1-208ENST00000513228 GPIHBP1Q8IV16 184 aa5.62□□□□□ -1.51
SMN1-208ENST00000513228 HPS5Q9UPZ3 1129 aa5.62□□□□□ -1.51
SMN1-208ENST00000513228 PTGDRQ13258 359 aa5.61□□□□□ -1.51
SMN1-208ENST00000513228 RBM46Q8TBY0 533 aaKnown RBP5.61□□□□□ -1.51
SMN1-208ENST00000513228 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
SMN1-208ENST00000513228 FAM161AQ3B820 660 aa5.6□□□□□ -1.51
SMN1-208ENST00000513228 PPP1R18Q6NYC8 613 aa5.6□□□□□ -1.51
SMN1-208ENST00000513228 NPDC1Q9NQX5 325 aaPredicted RBP5.6□□□□□ -1.51
SMN1-208ENST00000513228 RBM27Q9P2N5 1060 aaKnown RBP5.6□□□□□ -1.51
SMN1-208ENST00000513228 FAM198AQ9UFP1 575 aa5.6□□□□□ -1.51
SMN1-208ENST00000513228 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
SMN1-208ENST00000513228 TSR3Q9UJK0 312 aaKnown RBP5.59□□□□□ -1.51
SMN1-208ENST00000513228 HIC1Q14526 733 aa5.58□□□□□ -1.52
SMN1-208ENST00000513228 TRIM67Q6ZTA4 783 aa5.58□□□□□ -1.52
SMN1-208ENST00000513228 KRTAP1-3Q8IUG1 177 aa5.58□□□□□ -1.52
SMN1-208ENST00000513228 C3orf80F5H4A9 247 aa5.57□□□□□ -1.52
SMN1-208ENST00000513228 SWT1Q5T5J6 900 aaKnown RBP5.57□□□□□ -1.52
SMN1-208ENST00000513228 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
SMN1-208ENST00000513228 SLF2Q8IX21 1173 aa5.57□□□□□ -1.52
SMN1-208ENST00000513228 GNPATO15228 680 aa5.56□□□□□ -1.52
SMN1-208ENST00000513228 DNAJB2P25686 324 aa5.56□□□□□ -1.52
SMN1-208ENST00000513228 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.56□□□□□ -1.52
SMN1-208ENST00000513228 OATP04181 439 aa5.55□□□□□ -1.52
SMN1-208ENST00000513228 RSPH4AQ5TD94 716 aa5.55□□□□□ -1.52
SMN1-208ENST00000513228 NECTIN2Q92692 538 aa5.55□□□□□ -1.52
SMN1-208ENST00000513228 ADGRG1Q9Y653 693 aa5.55□□□□□ -1.52
SMN1-208ENST00000513228 RCCD1A6NED2 376 aa5.54□□□□□ -1.52
SMN1-208ENST00000513228 ST8SIA5O15466 376 aa5.54□□□□□ -1.52
SMN1-208ENST00000513228 KRI1Q8N9T8 703 aaKnown RBP5.54□□□□□ -1.52
SMN1-208ENST00000513228 AAASQ9NRG9 546 aa5.54□□□□□ -1.52
SMN1-208ENST00000513228 SLC24A1O60721 1099 aa5.53□□□□□ -1.52
SMN1-208ENST00000513228 FECHP22830 423 aa5.53□□□□□ -1.52
SMN1-208ENST00000513228 TTC13Q8NBP0 860 aa5.53□□□□□ -1.52
SMN1-208ENST00000513228 EYA1Q99502 592 aa5.53□□□□□ -1.52
SMN1-208ENST00000513228 KCTD17Q8N5Z5 321 aa5.52□□□□□ -1.53
SMN1-208ENST00000513228 RDH13Q8NBN7 331 aa5.52□□□□□ -1.53
SMN1-208ENST00000513228 NLRP7Q8WX94 980 aa5.52□□□□□ -1.53
SMN1-208ENST00000513228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.51□□□□□ -1.53
SMN1-208ENST00000513228 FAM187AA6NFU0 413 aa5.51□□□□□ -1.53
SMN1-208ENST00000513228 COPS2P61201 443 aa5.51□□□□□ -1.53
SMN1-208ENST00000513228 KMT5BQ4FZB7 885 aa5.51□□□□□ -1.53
SMN1-208ENST00000513228 TJAP1Q5JTD0 557 aa5.51□□□□□ -1.53
SMN1-208ENST00000513228 LMOD2Q6P5Q4 547 aa5.51□□□□□ -1.53
SMN1-208ENST00000513228 PSMG3-AS1Q96PY0 264 aa5.51□□□□□ -1.53
SMN1-208ENST00000513228 DDX11L8A8MPP1 907 aa5.5□□□□□ -1.53
SMN1-208ENST00000513228 METTL3Q86U44 580 aaKnown RBP5.5□□□□□ -1.53
SMN1-208ENST00000513228 PXYLP1Q8TE99 480 aa5.5□□□□□ -1.53
SMN1-208ENST00000513228 PRR14Q9BWN1 585 aa5.5□□□□□ -1.53
SMN1-208ENST00000513228 TMEM134Q9H6X4 195 aa5.5□□□□□ -1.53
SMN1-208ENST00000513228 C11orf95C9JLR9 678 aaPredicted RBP5.49□□□□□ -1.53
SMN1-208ENST00000513228 CFHP08603 1231 aa5.49□□□□□ -1.53
SMN1-208ENST00000513228 APLP1P51693 650 aa5.49□□□□□ -1.53
SMN1-208ENST00000513228 ZSCAN1Q8NBB4 408 aa5.49□□□□□ -1.53
SMN1-208ENST00000513228 PCDHB3Q9Y5E6 796 aa5.49□□□□□ -1.53
SMN1-208ENST00000513228 LORP23490 312 aaPredicted RBP5.48□□□□□ -1.53
SMN1-208ENST00000513228 PRR20EP86478 221 aa5.48□□□□□ -1.53
SMN1-208ENST00000513228 PRR20CP86479 221 aa5.48□□□□□ -1.53
SMN1-208ENST00000513228 PRR20DP86480 221 aa5.48□□□□□ -1.53
SMN1-208ENST00000513228 PRR20BP86481 221 aa5.48□□□□□ -1.53
SMN1-208ENST00000513228 PRR20AP86496 221 aa5.48□□□□□ -1.53
SMN1-208ENST00000513228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMN1-208ENST00000513228 MTRQ99707 1265 aa5.48□□□□□ -1.53
SMN1-208ENST00000513228 MAP2K5Q13163 448 aa5.47□□□□□ -1.53
SMN1-208ENST00000513228 SULF1Q8IWU6 871 aa5.47□□□□□ -1.53
SMN1-208ENST00000513228 IL21Q9HBE4 155 aa5.47□□□□□ -1.53
SMN1-208ENST00000513228 TERTO14746 1132 aaKnown RBP5.46□□□□□ -1.54
SMN1-208ENST00000513228 GPR37O15354 613 aa5.46□□□□□ -1.54
SMN1-208ENST00000513228 GMPR2Q9P2T1 348 aaKnown RBP5.46□□□□□ -1.54
SMN1-208ENST00000513228 MINK1Q8N4C8 1332 aaPredicted RBP5.46□□□□□ -1.54
SMN1-208ENST00000513228 MDM2Q00987 491 aaPredicted RBP5.45□□□□□ -1.54
SMN1-208ENST00000513228 DAXXQ9UER7 740 aaPredicted RBP5.45□□□□□ -1.54
SMN1-208ENST00000513228 DACH1Q9UI36 760 aa5.45□□□□□ -1.54
SMN1-208ENST00000513228 IRF6O14896 467 aa5.44□□□□□ -1.54
SMN1-208ENST00000513228 GGCXP38435 758 aa5.44□□□□□ -1.54
SMN1-208ENST00000513228 TTLL12Q14166 644 aaPredicted RBP5.44□□□□□ -1.54
SMN1-208ENST00000513228 BLOC1S3Q6QNY0 202 aa5.44□□□□□ -1.54
SMN1-208ENST00000513228 ZNF516Q92618 1163 aa5.44□□□□□ -1.54
SMN1-208ENST00000513228 CCDC102AQ96A19 550 aa5.44□□□□□ -1.54
SMN1-208ENST00000513228 BCANQ96GW7 911 aa5.44□□□□□ -1.54
SMN1-208ENST00000513228 NR1I2O75469 434 aa5.43□□□□□ -1.54
SMN1-208ENST00000513228 PUS10Q3MIT2 529 aaKnown RBP5.43□□□□□ -1.54
SMN1-208ENST00000513228 ACTN4O43707 911 aaKnown RBP5.42□□□□□ -1.54
SMN1-208ENST00000513228 SLC10A3P09131 477 aa5.42□□□□□ -1.54
SMN1-208ENST00000513228 NKX2-3Q8TAU0 364 aa5.42□□□□□ -1.54
SMN1-208ENST00000513228 ZC3H15Q8WU90 426 aaKnown RBP5.42□□□□□ -1.54
SMN1-208ENST00000513228 PHOX2BQ99453 314 aa5.42□□□□□ -1.54
SMN1-208ENST00000513228 ZPR1O75312 459 aa5.41□□□□□ -1.54
SMN1-208ENST00000513228 CLCN1P35523 988 aa5.41□□□□□ -1.54
SMN1-208ENST00000513228 GRIPAP1Q4V328 841 aa5.41□□□□□ -1.54
SMN1-208ENST00000513228 TLL1O43897 1013 aa5.4□□□□□ -1.54
SMN1-208ENST00000513228 SLC19A1P41440 591 aa5.4□□□□□ -1.54
SMN1-208ENST00000513228 FUT2Q10981 343 aa5.4□□□□□ -1.54
SMN1-208ENST00000513228 KCNMA1Q12791 1236 aa5.4□□□□□ -1.54
SMN1-208ENST00000513228 NUTM1Q86Y26 1132 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms