RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
RFC1-215ENST00000512881 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
RFC1-215ENST00000512881 COL9A1P20849 921 aa11.66□□□□□ -0.54
RFC1-215ENST00000512881 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
RFC1-215ENST00000512881 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
RFC1-215ENST00000512881 BHMG1C9JSJ3 638 aaPredicted RBP11.63□□□□□ -0.55
RFC1-215ENST00000512881 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
RFC1-215ENST00000512881 NBR1Q14596 966 aa11.63□□□□□ -0.55
RFC1-215ENST00000512881 ADCY10Q96PN6 1610 aa11.61□□□□□ -0.55
RFC1-215ENST00000512881 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
RFC1-215ENST00000512881 PROX2Q3B8N5 592 aa11.61□□□□□ -0.55
RFC1-215ENST00000512881 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
RFC1-215ENST00000512881 IQGAP2Q13576 1575 aa11.61□□□□□ -0.55
RFC1-215ENST00000512881 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
RFC1-215ENST00000512881 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
RFC1-215ENST00000512881 DISP1Q96F81 1524 aa11.6□□□□□ -0.55
RFC1-215ENST00000512881 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
RFC1-215ENST00000512881 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
RFC1-215ENST00000512881 UACAQ9BZF9 1416 aa11.58□□□□□ -0.56
RFC1-215ENST00000512881 ABCC2Q92887 1545 aa11.57□□□□□ -0.56
RFC1-215ENST00000512881 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
RFC1-215ENST00000512881 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
RFC1-215ENST00000512881 KCTD12Q96CX2 325 aaKnown RBP11.56□□□□□ -0.56
RFC1-215ENST00000512881 UHRF1BP1LA0JNW5 1464 aa11.56□□□□□ -0.56
RFC1-215ENST00000512881 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
RFC1-215ENST00000512881 MAP3K7O43318 606 aa11.55□□□□□ -0.56
RFC1-215ENST00000512881 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
RFC1-215ENST00000512881 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
RFC1-215ENST00000512881 ASXL2Q76L83 1435 aa11.54□□□□□ -0.56
RFC1-215ENST00000512881 GRXCR2A6NFK2 248 aa11.54□□□□□ -0.56
RFC1-215ENST00000512881 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
RFC1-215ENST00000512881 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
RFC1-215ENST00000512881 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
RFC1-215ENST00000512881 PLB1Q6P1J6 1458 aa11.53□□□□□ -0.56
RFC1-215ENST00000512881 MRPL50Q8N5N7 158 aaKnown RBP11.53□□□□□ -0.56
RFC1-215ENST00000512881 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
RFC1-215ENST00000512881 ARHGEF1Q92888 912 aaKnown RBP11.52□□□□□ -0.57
RFC1-215ENST00000512881 OSBPP22059 807 aa11.51□□□□□ -0.57
RFC1-215ENST00000512881 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
RFC1-215ENST00000512881 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
RFC1-215ENST00000512881 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
RFC1-215ENST00000512881 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
RFC1-215ENST00000512881 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
RFC1-215ENST00000512881 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
RFC1-215ENST00000512881 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
RFC1-215ENST00000512881 CDHR5Q9HBB8 845 aa11.49□□□□□ -0.57
RFC1-215ENST00000512881 KIAA0556O60303 1618 aa11.49□□□□□ -0.57
RFC1-215ENST00000512881 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
RFC1-215ENST00000512881 WNT2BQ93097 391 aa11.47□□□□□ -0.57
RFC1-215ENST00000512881 EPRSP07814 1512 aaKnown RBP11.46□□□□□ -0.57
RFC1-215ENST00000512881 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
RFC1-215ENST00000512881 GOLGA8CPA6NN73 597 aa11.45□□□□□ -0.58
RFC1-215ENST00000512881 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
RFC1-215ENST00000512881 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
RFC1-215ENST00000512881 GLI2P10070 1586 aa11.45□□□□□ -0.58
RFC1-215ENST00000512881 EEA1Q15075 1411 aa11.44□□□□□ -0.58
RFC1-215ENST00000512881 LAPTM4BQ86VI4 370 aa11.44□□□□□ -0.58
RFC1-215ENST00000512881 ARID3CA6NKF2 412 aa11.43□□□□□ -0.58
RFC1-215ENST00000512881 RANGAP1P46060 587 aaPredicted RBP11.43□□□□□ -0.58
RFC1-215ENST00000512881 PTPN5P54829 565 aa11.42□□□□□ -0.58
RFC1-215ENST00000512881 FAM198AQ9UFP1 575 aa11.42□□□□□ -0.58
RFC1-215ENST00000512881 WDR7Q9Y4E6 1490 aa11.42□□□□□ -0.58
RFC1-215ENST00000512881 KDM6BO15054 1643 aa11.42□□□□□ -0.58
RFC1-215ENST00000512881 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
RFC1-215ENST00000512881 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
RFC1-215ENST00000512881 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
RFC1-215ENST00000512881 ABCA8O94911 1581 aa11.41□□□□□ -0.58
RFC1-215ENST00000512881 TSPOAP1O95153 1857 aa11.4□□□□□ -0.58
RFC1-215ENST00000512881 ZCCHC11Q5TAX3 1644 aaKnown RBP11.4□□□□□ -0.58
RFC1-215ENST00000512881 PRSS12P56730 875 aa11.4□□□□□ -0.58
RFC1-215ENST00000512881 ANKK1Q8NFD2 765 aa11.4□□□□□ -0.58
RFC1-215ENST00000512881 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
RFC1-215ENST00000512881 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.59
RFC1-215ENST00000512881 COL17A1Q9UMD9 1497 aaPredicted RBP11.39□□□□□ -0.59
RFC1-215ENST00000512881 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
RFC1-215ENST00000512881 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
RFC1-215ENST00000512881 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
RFC1-215ENST00000512881 C3orf80F5H4A9 247 aa11.38□□□□□ -0.59
RFC1-215ENST00000512881 BCAMP50895 628 aa11.38□□□□□ -0.59
RFC1-215ENST00000512881 NPDC1Q9NQX5 325 aaPredicted RBP11.38□□□□□ -0.59
RFC1-215ENST00000512881 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
RFC1-215ENST00000512881 ATP10BO94823 1461 aa11.38□□□□□ -0.59
RFC1-215ENST00000512881 TEX14Q8IWB6 1497 aa11.38□□□□□ -0.59
RFC1-215ENST00000512881 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
RFC1-215ENST00000512881 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
RFC1-215ENST00000512881 SEMA3EO15041 775 aa11.35□□□□□ -0.59
RFC1-215ENST00000512881 KDM2AQ9Y2K7 1162 aa11.35□□□□□ -0.59
RFC1-215ENST00000512881 PPRC1Q5VV67 1664 aaKnown RBP11.35□□□□□ -0.59
RFC1-215ENST00000512881 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
RFC1-215ENST00000512881 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
RFC1-215ENST00000512881 MAP3K4Q9Y6R4 1608 aa11.34□□□□□ -0.59
RFC1-215ENST00000512881 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
RFC1-215ENST00000512881 SMAPO00193 183 aa11.33□□□□□ -0.6
RFC1-215ENST00000512881 FHOD3Q2V2M9 1422 aa11.33□□□□□ -0.6
RFC1-215ENST00000512881 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
RFC1-215ENST00000512881 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
RFC1-215ENST00000512881 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
RFC1-215ENST00000512881 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
RFC1-215ENST00000512881 TATDN2Q93075 761 aa11.31□□□□□ -0.6
RFC1-215ENST00000512881 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms