RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 ADGRB3O60242 1522 aa24.98■■□□□ 1.59
DDR1-269ENST00000512725 JCADQ9P266 1359 aa24.98■■□□□ 1.59
DDR1-269ENST00000512725 C14orf37Q86TY3 774 aa24.98■■□□□ 1.59
DDR1-269ENST00000512725 MEX3CQ5U5Q3 659 aaKnown RBP24.97■■□□□ 1.59
DDR1-269ENST00000512725 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
DDR1-269ENST00000512725 SLC52A1Q9NWF4 448 aa24.96■■□□□ 1.59
DDR1-269ENST00000512725 NWD1Q149M9 1564 aa24.95■■□□□ 1.58
DDR1-269ENST00000512725 NOS1P29475 1434 aa24.94■■□□□ 1.58
DDR1-269ENST00000512725 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
DDR1-269ENST00000512725 FGD6Q6ZV73 1430 aa24.92■■□□□ 1.58
DDR1-269ENST00000512725 HDGFP51858 240 aaKnown RBP24.91■■□□□ 1.58
DDR1-269ENST00000512725 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
DDR1-269ENST00000512725 MYO5BQ9ULV0 1848 aa24.89■■□□□ 1.57
DDR1-269ENST00000512725 RIMS2Q9UQ26 1411 aa24.88■■□□□ 1.57
DDR1-269ENST00000512725 PLEKHG1Q9ULL1 1385 aa24.88■■□□□ 1.57
DDR1-269ENST00000512725 CHD2O14647 1828 aaKnown RBP24.87■■□□□ 1.57
DDR1-269ENST00000512725 NUTM2DQ5VT03 806 aaPredicted RBP24.87■■□□□ 1.57
DDR1-269ENST00000512725 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
DDR1-269ENST00000512725 GCC2Q8IWJ2 1684 aa24.85■■□□□ 1.57
DDR1-269ENST00000512725 ZNF772Q68DY9 489 aaPredicted RBP24.85■■□□□ 1.57
DDR1-269ENST00000512725 COL16A1Q07092 1604 aaPredicted RBP24.85■■□□□ 1.57
DDR1-269ENST00000512725 ATF3P18847 181 aa24.84■■□□□ 1.57
DDR1-269ENST00000512725 ZFYVE9O95405 1425 aa24.84■■□□□ 1.57
DDR1-269ENST00000512725 SPATA31A6Q5VVP1 1343 aa24.83■■□□□ 1.56
DDR1-269ENST00000512725 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
DDR1-269ENST00000512725 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
DDR1-269ENST00000512725 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
DDR1-269ENST00000512725 LRP6O75581 1613 aa24.82■■□□□ 1.56
DDR1-269ENST00000512725 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.81■■□□□ 1.56
DDR1-269ENST00000512725 UPF1Q92900 1129 aaKnown RBP eCLIP24.81■■□□□ 1.56
DDR1-269ENST00000512725 TBX22Q9Y458 520 aa24.81■■□□□ 1.56
DDR1-269ENST00000512725 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
DDR1-269ENST00000512725 RPRD2Q5VT52 1461 aaKnown RBP24.8■■□□□ 1.56
DDR1-269ENST00000512725 ANKRD50Q9ULJ7 1429 aa24.78■■□□□ 1.56
DDR1-269ENST00000512725 TMEM131LA2VDJ0 1609 aa24.77■■□□□ 1.56
DDR1-269ENST00000512725 C19orf44Q9H6X5 657 aa24.77■■□□□ 1.56
DDR1-269ENST00000512725 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.76■■□□□ 1.55
DDR1-269ENST00000512725 RXRBP28702 533 aa24.76■■□□□ 1.55
DDR1-269ENST00000512725 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
DDR1-269ENST00000512725 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
DDR1-269ENST00000512725 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
DDR1-269ENST00000512725 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
DDR1-269ENST00000512725 AMOTL2Q9Y2J4 779 aa24.71■■□□□ 1.55
DDR1-269ENST00000512725 ADAMTS13Q76LX8 1427 aa24.7■■□□□ 1.55
DDR1-269ENST00000512725 BRINP3Q76B58 766 aa24.7■■□□□ 1.54
DDR1-269ENST00000512725 DIP2AQ14689 1571 aa24.68■■□□□ 1.54
DDR1-269ENST00000512725 AFF2P51816 1311 aa24.67■■□□□ 1.54
DDR1-269ENST00000512725 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
DDR1-269ENST00000512725 TRPM2O94759 1503 aa24.66■■□□□ 1.54
DDR1-269ENST00000512725 E9PCH4 1651 aa24.64■■□□□ 1.53
DDR1-269ENST00000512725 PTPRUQ92729 1446 aa24.62■■□□□ 1.53
DDR1-269ENST00000512725 UNC13BO14795 1591 aa24.62■■□□□ 1.53
DDR1-269ENST00000512725 C8orf37Q96NL8 207 aa24.61■■□□□ 1.53
DDR1-269ENST00000512725 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
DDR1-269ENST00000512725 ASXL1Q8IXJ9 1541 aa24.59■■□□□ 1.53
DDR1-269ENST00000512725 DDX17Q92841 729 aaKnown RBP24.58■■□□□ 1.53
DDR1-269ENST00000512725 LRRC59Q96AG4 307 aaKnown RBP24.58■■□□□ 1.53
DDR1-269ENST00000512725 QTRT2Q9H974 415 aaKnown RBP24.58■■□□□ 1.53
DDR1-269ENST00000512725 CDK12Q9NYV4 1490 aaPredicted RBP24.57■■□□□ 1.52
DDR1-269ENST00000512725 NUP155O75694 1391 aa24.56■■□□□ 1.52
DDR1-269ENST00000512725 DCCP43146 1447 aa24.55■■□□□ 1.52
DDR1-269ENST00000512725 ITGAEP38570 1179 aa24.55■■□□□ 1.52
DDR1-269ENST00000512725 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
DDR1-269ENST00000512725 IQGAP3Q86VI3 1631 aa24.53■■□□□ 1.52
DDR1-269ENST00000512725 MST1RQ04912 1400 aa24.53■■□□□ 1.52
DDR1-269ENST00000512725 RBM6P78332 1123 aaKnown RBP24.53■■□□□ 1.52
DDR1-269ENST00000512725 ADAMTS2O95450 1211 aa24.52■■□□□ 1.52
DDR1-269ENST00000512725 RGS12O14924 1447 aa24.52■■□□□ 1.52
DDR1-269ENST00000512725 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
DDR1-269ENST00000512725 NGLY1Q96IV0 654 aa24.51■■□□□ 1.51
DDR1-269ENST00000512725 XRN1Q8IZH2 1706 aaKnown RBP24.49■■□□□ 1.51
DDR1-269ENST00000512725 METP08581 1390 aa24.48■■□□□ 1.51
DDR1-269ENST00000512725 PNPLA6Q8IY17 1366 aa24.48■■□□□ 1.51
DDR1-269ENST00000512725 NRXN3Q9Y4C0 1643 aa24.47■■□□□ 1.51
DDR1-269ENST00000512725 SETBP1Q9Y6X0 1596 aa24.46■■□□□ 1.51
DDR1-269ENST00000512725 ROCK1Q13464 1354 aa24.45■■□□□ 1.5
DDR1-269ENST00000512725 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
DDR1-269ENST00000512725 SPHKAPQ2M3C7 1700 aa24.41■■□□□ 1.5
DDR1-269ENST00000512725 NALCNQ8IZF0 1738 aa24.41■■□□□ 1.5
DDR1-269ENST00000512725 USP21Q9UK80 565 aa24.41■■□□□ 1.5
DDR1-269ENST00000512725 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
DDR1-269ENST00000512725 C1orf167Q5SNV9 1468 aa24.38■■□□□ 1.49
DDR1-269ENST00000512725 ORAI2Q96SN7 254 aa24.37■■□□□ 1.49
DDR1-269ENST00000512725 TRPC5Q9UL62 973 aaPredicted RBP24.35■■□□□ 1.49
DDR1-269ENST00000512725 SRCAPQ6ZRS2 3230 aa24.35■■□□□ 1.49
DDR1-269ENST00000512725 FOXD1Q16676 465 aa24.34■■□□□ 1.49
DDR1-269ENST00000512725 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
DDR1-269ENST00000512725 ZRANB1Q9UGI0 708 aa24.33■■□□□ 1.49
DDR1-269ENST00000512725 NEXMIFQ5QGS0 1516 aa24.31■■□□□ 1.48
DDR1-269ENST00000512725 CLTCL1P53675 1640 aa24.31■■□□□ 1.48
DDR1-269ENST00000512725 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
DDR1-269ENST00000512725 KIF1BO60333 1816 aa24.28■■□□□ 1.48
DDR1-269ENST00000512725 ROBO2Q9HCK4 1378 aa24.28■■□□□ 1.48
DDR1-269ENST00000512725 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
DDR1-269ENST00000512725 VGFO15240 615 aaPredicted RBP24.26■■□□□ 1.47
DDR1-269ENST00000512725 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
DDR1-269ENST00000512725 ESCO1Q5FWF5 840 aa24.25■■□□□ 1.47
DDR1-269ENST00000512725 ATRNO75882 1429 aa24.24■■□□□ 1.47
DDR1-269ENST00000512725 XPCQ01831 940 aaPredicted RBP24.23■■□□□ 1.47
DDR1-269ENST00000512725 LAMC1P11047 1609 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms