RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 SLC26A8Q96RN1 970 aa22.43■■□□□ 1.18
LETM1-207ENST00000512669 MSH6P52701 1360 aa22.42■■□□□ 1.18
LETM1-207ENST00000512669 HDGFP51858 240 aaKnown RBP22.42■■□□□ 1.18
LETM1-207ENST00000512669 ANKRD50Q9ULJ7 1429 aa22.41■■□□□ 1.18
LETM1-207ENST00000512669 PLEKHG1Q9ULL1 1385 aa22.39■■□□□ 1.18
LETM1-207ENST00000512669 BCANQ96GW7 911 aa22.39■■□□□ 1.17
LETM1-207ENST00000512669 RGS17Q9UGC6 210 aaPredicted RBP22.39■■□□□ 1.17
LETM1-207ENST00000512669 ZFYVE9O95405 1425 aa22.38■■□□□ 1.17
LETM1-207ENST00000512669 GCC2Q8IWJ2 1684 aa22.36■■□□□ 1.17
LETM1-207ENST00000512669 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
LETM1-207ENST00000512669 NCOA3Q9Y6Q9 1424 aa22.35■■□□□ 1.17
LETM1-207ENST00000512669 PPP1R15AO75807 674 aaPredicted RBP22.35■■□□□ 1.17
LETM1-207ENST00000512669 RIMS2Q9UQ26 1411 aa22.34■■□□□ 1.17
LETM1-207ENST00000512669 TMEM131LA2VDJ0 1609 aa22.34■■□□□ 1.17
LETM1-207ENST00000512669 UNC13BO14795 1591 aa22.33■■□□□ 1.17
LETM1-207ENST00000512669 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.33■■□□□ 1.17
LETM1-207ENST00000512669 MYO5BQ9ULV0 1848 aa22.33■■□□□ 1.16
LETM1-207ENST00000512669 SLAIN2Q9P270 581 aa22.32■■□□□ 1.16
LETM1-207ENST00000512669 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
LETM1-207ENST00000512669 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
LETM1-207ENST00000512669 JCADQ9P266 1359 aa22.3■■□□□ 1.16
LETM1-207ENST00000512669 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
LETM1-207ENST00000512669 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
LETM1-207ENST00000512669 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
LETM1-207ENST00000512669 ROCK1Q13464 1354 aa22.26■■□□□ 1.15
LETM1-207ENST00000512669 POTEAQ6S8J7 498 aa22.26■■□□□ 1.15
LETM1-207ENST00000512669 E9PCH4 1651 aa22.25■■□□□ 1.15
LETM1-207ENST00000512669 IQGAP3Q86VI3 1631 aa22.24■■□□□ 1.15
LETM1-207ENST00000512669 COL16A1Q07092 1604 aaPredicted RBP22.23■■□□□ 1.15
LETM1-207ENST00000512669 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
LETM1-207ENST00000512669 ITGAEP38570 1179 aa22.22■■□□□ 1.15
LETM1-207ENST00000512669 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
LETM1-207ENST00000512669 ADAMTS13Q76LX8 1427 aa22.22■■□□□ 1.15
LETM1-207ENST00000512669 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
LETM1-207ENST00000512669 SPATA31A6Q5VVP1 1343 aa22.21■■□□□ 1.15
LETM1-207ENST00000512669 TRPM2O94759 1503 aa22.21■■□□□ 1.15
LETM1-207ENST00000512669 C19orf44Q9H6X5 657 aa22.2■■□□□ 1.14
LETM1-207ENST00000512669 AHDC1Q5TGY3 1603 aaPredicted RBP22.19■■□□□ 1.14
LETM1-207ENST00000512669 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.18■■□□□ 1.14
LETM1-207ENST00000512669 ATF3P18847 181 aa22.18■■□□□ 1.14
LETM1-207ENST00000512669 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
LETM1-207ENST00000512669 DCCP43146 1447 aa22.15■■□□□ 1.14
LETM1-207ENST00000512669 NUP155O75694 1391 aa22.15■■□□□ 1.14
LETM1-207ENST00000512669 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
LETM1-207ENST00000512669 ZNF772Q68DY9 489 aaPredicted RBP22.13■■□□□ 1.13
LETM1-207ENST00000512669 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
LETM1-207ENST00000512669 NUTM2DQ5VT03 806 aaPredicted RBP22.11■■□□□ 1.13
LETM1-207ENST00000512669 AMOTL2Q9Y2J4 779 aa22.11■■□□□ 1.13
LETM1-207ENST00000512669 LRP6O75581 1613 aa22.1■■□□□ 1.13
LETM1-207ENST00000512669 SETD1AO15047 1707 aaKnown RBP22.1■■□□□ 1.13
LETM1-207ENST00000512669 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
LETM1-207ENST00000512669 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
LETM1-207ENST00000512669 XRN1Q8IZH2 1706 aaKnown RBP22.09■■□□□ 1.13
LETM1-207ENST00000512669 PTPRUQ92729 1446 aa22.07■■□□□ 1.12
LETM1-207ENST00000512669 NRXN3Q9Y4C0 1643 aa22.06■■□□□ 1.12
LETM1-207ENST00000512669 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
LETM1-207ENST00000512669 ASXL1Q8IXJ9 1541 aa22.04■■□□□ 1.12
LETM1-207ENST00000512669 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.12
LETM1-207ENST00000512669 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
LETM1-207ENST00000512669 NHSL1Q5SYE7 1610 aa22.01■■□□□ 1.11
LETM1-207ENST00000512669 CDK12Q9NYV4 1490 aaPredicted RBP22.01■■□□□ 1.11
LETM1-207ENST00000512669 MST1RQ04912 1400 aa22■■□□□ 1.11
LETM1-207ENST00000512669 NAIPQ13075 1403 aa22■■□□□ 1.11
LETM1-207ENST00000512669 ADGRL3Q9HAR2 1447 aa21.98■■□□□ 1.11
LETM1-207ENST00000512669 RXRBP28702 533 aa21.98■■□□□ 1.11
LETM1-207ENST00000512669 LRRC59Q96AG4 307 aaKnown RBP21.97■■□□□ 1.11
LETM1-207ENST00000512669 METP08581 1390 aa21.96■■□□□ 1.11
LETM1-207ENST00000512669 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
LETM1-207ENST00000512669 UPF1Q92900 1129 aaKnown RBP eCLIP21.95■■□□□ 1.1
LETM1-207ENST00000512669 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
LETM1-207ENST00000512669 NUTM2BA6NNL0 878 aaPredicted RBP21.94■■□□□ 1.1
LETM1-207ENST00000512669 NUTM2EB1AL46 878 aaPredicted RBP21.94■■□□□ 1.1
LETM1-207ENST00000512669 NUTM2AQ8IVF1 878 aaPredicted RBP21.94■■□□□ 1.1
LETM1-207ENST00000512669 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
LETM1-207ENST00000512669 KIF1BO60333 1816 aa21.94■■□□□ 1.1
LETM1-207ENST00000512669 NALCNQ8IZF0 1738 aa21.92■■□□□ 1.1
LETM1-207ENST00000512669 HFM1A2PYH4 1435 aa21.91■■□□□ 1.1
LETM1-207ENST00000512669 PTCH1Q13635 1447 aa21.91■■□□□ 1.1
LETM1-207ENST00000512669 AFF2P51816 1311 aa21.91■■□□□ 1.1
LETM1-207ENST00000512669 PNPLA6Q8IY17 1366 aa21.88■■□□□ 1.09
LETM1-207ENST00000512669 LAMC1P11047 1609 aa21.88■■□□□ 1.09
LETM1-207ENST00000512669 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
LETM1-207ENST00000512669 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
LETM1-207ENST00000512669 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
LETM1-207ENST00000512669 RBM6P78332 1123 aaKnown RBP21.85■■□□□ 1.09
LETM1-207ENST00000512669 RPGRIP1LQ68CZ1 1315 aa21.84■■□□□ 1.09
LETM1-207ENST00000512669 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
LETM1-207ENST00000512669 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
LETM1-207ENST00000512669 RGS12O14924 1447 aa21.8■■□□□ 1.08
LETM1-207ENST00000512669 NGLY1Q96IV0 654 aa21.8■■□□□ 1.08
LETM1-207ENST00000512669 SOS2Q07890 1332 aaPredicted RBP21.8■■□□□ 1.08
LETM1-207ENST00000512669 ROBO2Q9HCK4 1378 aa21.79■■□□□ 1.08
LETM1-207ENST00000512669 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
LETM1-207ENST00000512669 PPLO60437 1756 aa21.76■■□□□ 1.07
LETM1-207ENST00000512669 SLC4A1APQ9BWU0 796 aaKnown RBP21.75■■□□□ 1.07
LETM1-207ENST00000512669 COL22A1Q8NFW1 1626 aaPredicted RBP21.75■■□□□ 1.07
LETM1-207ENST00000512669 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
LETM1-207ENST00000512669 ADAMTS2O95450 1211 aa21.74■■□□□ 1.07
LETM1-207ENST00000512669 FOXD1Q16676 465 aa21.73■■□□□ 1.07
LETM1-207ENST00000512669 ORAI2Q96SN7 254 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms