RNA–Protein interactions for RNA: ENST00000512487.1

LINC00290-201, long intergenic non-protein coding RNA 290, humanhuman

TSL 1 (best) BASIC

Gene LINC00290, Length 593 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00290-201ENST00000512487 SLIT1O75093 1534 aa17.09■□□□□ 0.33
LINC00290-201ENST00000512487 CLTCL1P53675 1640 aa17.08■□□□□ 0.32
LINC00290-201ENST00000512487 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
LINC00290-201ENST00000512487 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
LINC00290-201ENST00000512487 TMEM131LA2VDJ0 1609 aa17.07■□□□□ 0.32
LINC00290-201ENST00000512487 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
LINC00290-201ENST00000512487 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
LINC00290-201ENST00000512487 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
LINC00290-201ENST00000512487 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
LINC00290-201ENST00000512487 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
LINC00290-201ENST00000512487 UBR1Q8IWV7 1749 aa17.05■□□□□ 0.32
LINC00290-201ENST00000512487 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
LINC00290-201ENST00000512487 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
LINC00290-201ENST00000512487 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.32
LINC00290-201ENST00000512487 BCANQ96GW7 911 aa17.02■□□□□ 0.32
LINC00290-201ENST00000512487 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
LINC00290-201ENST00000512487 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.31
LINC00290-201ENST00000512487 MED14O60244 1454 aa17■□□□□ 0.31
LINC00290-201ENST00000512487 MYOM2P54296 1465 aa16.99■□□□□ 0.31
LINC00290-201ENST00000512487 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
LINC00290-201ENST00000512487 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
LINC00290-201ENST00000512487 NPHP4O75161 1426 aaPredicted RBP16.97■□□□□ 0.31
LINC00290-201ENST00000512487 LTKP29376 864 aa16.97■□□□□ 0.31
LINC00290-201ENST00000512487 HSPA2P54652 639 aa16.97■□□□□ 0.31
LINC00290-201ENST00000512487 PIK3R4Q99570 1358 aa16.97■□□□□ 0.31
LINC00290-201ENST00000512487 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.3
LINC00290-201ENST00000512487 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
LINC00290-201ENST00000512487 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
LINC00290-201ENST00000512487 DIP2AQ14689 1571 aa16.94■□□□□ 0.3
LINC00290-201ENST00000512487 C14orf93Q9H972 538 aaKnown RBP16.92■□□□□ 0.3
LINC00290-201ENST00000512487 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
LINC00290-201ENST00000512487 POLR1AO95602 1720 aaPredicted RBP16.91■□□□□ 0.3
LINC00290-201ENST00000512487 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
LINC00290-201ENST00000512487 PPLO60437 1756 aa16.91■□□□□ 0.3
LINC00290-201ENST00000512487 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
LINC00290-201ENST00000512487 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
LINC00290-201ENST00000512487 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
LINC00290-201ENST00000512487 MYO5BQ9ULV0 1848 aa16.89■□□□□ 0.29
LINC00290-201ENST00000512487 PRAG1Q86YV5 1406 aa16.88■□□□□ 0.29
LINC00290-201ENST00000512487 LAMC1P11047 1609 aa16.88■□□□□ 0.29
LINC00290-201ENST00000512487 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
LINC00290-201ENST00000512487 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
LINC00290-201ENST00000512487 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
LINC00290-201ENST00000512487 KCNA6P17658 529 aa16.86■□□□□ 0.29
LINC00290-201ENST00000512487 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
LINC00290-201ENST00000512487 SLC26A8Q96RN1 970 aa16.84■□□□□ 0.29
LINC00290-201ENST00000512487 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
LINC00290-201ENST00000512487 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
LINC00290-201ENST00000512487 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
LINC00290-201ENST00000512487 ALKQ9UM73 1620 aa16.82■□□□□ 0.28
LINC00290-201ENST00000512487 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
LINC00290-201ENST00000512487 EIF3AQ14152 1382 aaKnown RBP16.82■□□□□ 0.28
LINC00290-201ENST00000512487 CFAP70Q5T0N1 1121 aa16.82■□□□□ 0.28
LINC00290-201ENST00000512487 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
LINC00290-201ENST00000512487 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
LINC00290-201ENST00000512487 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
LINC00290-201ENST00000512487 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
LINC00290-201ENST00000512487 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
LINC00290-201ENST00000512487 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
LINC00290-201ENST00000512487 CPS1P31327 1500 aa16.78■□□□□ 0.28
LINC00290-201ENST00000512487 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
LINC00290-201ENST00000512487 RALGAPBQ86X10 1494 aa16.78■□□□□ 0.28
LINC00290-201ENST00000512487 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.27
LINC00290-201ENST00000512487 TECPR2O15040 1411 aa16.76■□□□□ 0.27
LINC00290-201ENST00000512487 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
LINC00290-201ENST00000512487 METP08581 1390 aa16.76■□□□□ 0.27
LINC00290-201ENST00000512487 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
LINC00290-201ENST00000512487 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
LINC00290-201ENST00000512487 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
LINC00290-201ENST00000512487 POGKQ9P215 609 aa16.74■□□□□ 0.27
LINC00290-201ENST00000512487 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
LINC00290-201ENST00000512487 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
LINC00290-201ENST00000512487 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
LINC00290-201ENST00000512487 STK26Q9P289 416 aa16.71■□□□□ 0.27
LINC00290-201ENST00000512487 NWD1Q149M9 1564 aa16.71■□□□□ 0.27
LINC00290-201ENST00000512487 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
LINC00290-201ENST00000512487 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
LINC00290-201ENST00000512487 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC00290-201ENST00000512487 NBPF1Q3BBV0 1214 aa16.7■□□□□ 0.26
LINC00290-201ENST00000512487 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
LINC00290-201ENST00000512487 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
LINC00290-201ENST00000512487 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
LINC00290-201ENST00000512487 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
LINC00290-201ENST00000512487 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
LINC00290-201ENST00000512487 ZNF335Q9H4Z2 1342 aaPredicted RBP16.69■□□□□ 0.26
LINC00290-201ENST00000512487 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
LINC00290-201ENST00000512487 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
LINC00290-201ENST00000512487 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
LINC00290-201ENST00000512487 MSH6P52701 1360 aa16.66■□□□□ 0.26
LINC00290-201ENST00000512487 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
LINC00290-201ENST00000512487 CADPS2Q86UW7 1296 aa16.66■□□□□ 0.26
LINC00290-201ENST00000512487 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
LINC00290-201ENST00000512487 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
LINC00290-201ENST00000512487 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
LINC00290-201ENST00000512487 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
LINC00290-201ENST00000512487 XRN1Q8IZH2 1706 aaKnown RBP16.65■□□□□ 0.26
LINC00290-201ENST00000512487 DCCP43146 1447 aa16.64■□□□□ 0.25
LINC00290-201ENST00000512487 ATF3P18847 181 aa16.64■□□□□ 0.25
LINC00290-201ENST00000512487 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
LINC00290-201ENST00000512487 USP47Q96K76 1375 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms