RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 PKNOX2Q96KN3 472 aa13.73□□□□□ -0.21
PDCD6-209ENST00000512466 WASHC2CQ9Y4E1 1318 aa13.73□□□□□ -0.21
PDCD6-209ENST00000512466 RPRD2Q5VT52 1461 aaKnown RBP13.73□□□□□ -0.21
PDCD6-209ENST00000512466 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
PDCD6-209ENST00000512466 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
PDCD6-209ENST00000512466 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
PDCD6-209ENST00000512466 CDC42BPAQ5VT25 1732 aa13.72□□□□□ -0.21
PDCD6-209ENST00000512466 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
PDCD6-209ENST00000512466 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
PDCD6-209ENST00000512466 MBD5Q9P267 1494 aa13.72□□□□□ -0.21
PDCD6-209ENST00000512466 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
PDCD6-209ENST00000512466 TEX14Q8IWB6 1497 aa13.72□□□□□ -0.21
PDCD6-209ENST00000512466 BECN1Q14457 450 aa13.71□□□□□ -0.21
PDCD6-209ENST00000512466 PREX2Q70Z35 1606 aa13.71□□□□□ -0.21
PDCD6-209ENST00000512466 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
PDCD6-209ENST00000512466 SAMD9LQ8IVG5 1584 aa13.7□□□□□ -0.22
PDCD6-209ENST00000512466 MS4A1P11836 297 aa13.7□□□□□ -0.22
PDCD6-209ENST00000512466 DHX29Q7Z478 1369 aaKnown RBP13.7□□□□□ -0.22
PDCD6-209ENST00000512466 UBE2Q2Q8WVN8 375 aa13.7□□□□□ -0.22
PDCD6-209ENST00000512466 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
PDCD6-209ENST00000512466 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
PDCD6-209ENST00000512466 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
PDCD6-209ENST00000512466 KDM6BO15054 1643 aa13.68□□□□□ -0.22
PDCD6-209ENST00000512466 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
PDCD6-209ENST00000512466 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
PDCD6-209ENST00000512466 NEO1Q92859 1461 aa13.68□□□□□ -0.22
PDCD6-209ENST00000512466 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
PDCD6-209ENST00000512466 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
PDCD6-209ENST00000512466 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
PDCD6-209ENST00000512466 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
PDCD6-209ENST00000512466 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
PDCD6-209ENST00000512466 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
PDCD6-209ENST00000512466 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
PDCD6-209ENST00000512466 MFAP1P55081 439 aaKnown RBP13.66□□□□□ -0.22
PDCD6-209ENST00000512466 CDC42BPBQ9Y5S2 1711 aa13.66□□□□□ -0.22
PDCD6-209ENST00000512466 ARHGEF12Q9NZN5 1544 aa13.66□□□□□ -0.22
PDCD6-209ENST00000512466 ARHGEF5Q12774 1597 aa13.65□□□□□ -0.22
PDCD6-209ENST00000512466 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
PDCD6-209ENST00000512466 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDCD6-209ENST00000512466 ARAP3Q8WWN8 1544 aa13.65□□□□□ -0.22
PDCD6-209ENST00000512466 RTEL1-TNFRSF6BF6WH68 1400 aa13.65□□□□□ -0.22
PDCD6-209ENST00000512466 ADGRL2O95490 1459 aa13.65□□□□□ -0.22
PDCD6-209ENST00000512466 TPRNQ4KMQ1 711 aa13.65□□□□□ -0.23
PDCD6-209ENST00000512466 STK26Q9P289 416 aa13.64□□□□□ -0.23
PDCD6-209ENST00000512466 ABCC1P33527 1531 aa13.64□□□□□ -0.23
PDCD6-209ENST00000512466 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
PDCD6-209ENST00000512466 POGZQ7Z3K3 1410 aa13.62□□□□□ -0.23
PDCD6-209ENST00000512466 TSPOAP1O95153 1857 aa13.62□□□□□ -0.23
PDCD6-209ENST00000512466 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
PDCD6-209ENST00000512466 CFAP70Q5T0N1 1121 aa13.6□□□□□ -0.23
PDCD6-209ENST00000512466 DISP3Q9P2K9 1392 aa13.6□□□□□ -0.23
PDCD6-209ENST00000512466 CFAP74Q9C0B2 1584 aa13.6□□□□□ -0.23
PDCD6-209ENST00000512466 A2MP01023 1474 aa13.6□□□□□ -0.23
PDCD6-209ENST00000512466 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
PDCD6-209ENST00000512466 NCLP19338 710 aaKnown RBP13.59□□□□□ -0.23
PDCD6-209ENST00000512466 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
PDCD6-209ENST00000512466 POGKQ9P215 609 aa13.58□□□□□ -0.23
PDCD6-209ENST00000512466 ERBINQ96RT1 1412 aa13.58□□□□□ -0.23
PDCD6-209ENST00000512466 APBB1O00213 710 aa13.58□□□□□ -0.24
PDCD6-209ENST00000512466 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.24
PDCD6-209ENST00000512466 ARID3AQ99856 593 aa13.58□□□□□ -0.24
PDCD6-209ENST00000512466 SPATA31E1Q6ZUB1 1445 aa13.58□□□□□ -0.24
PDCD6-209ENST00000512466 TMEM132EQ6IEE7 984 aa13.58□□□□□ -0.24
PDCD6-209ENST00000512466 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
PDCD6-209ENST00000512466 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
PDCD6-209ENST00000512466 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
PDCD6-209ENST00000512466 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
PDCD6-209ENST00000512466 IGHDP01880 384 aa13.56□□□□□ -0.24
PDCD6-209ENST00000512466 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
PDCD6-209ENST00000512466 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
PDCD6-209ENST00000512466 E9PSI1 815 aa13.55□□□□□ -0.24
PDCD6-209ENST00000512466 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
PDCD6-209ENST00000512466 ADGBQ8N7X0 1667 aa13.55□□□□□ -0.24
PDCD6-209ENST00000512466 GLI2P10070 1586 aa13.55□□□□□ -0.24
PDCD6-209ENST00000512466 DIP2BQ9P265 1576 aa13.55□□□□□ -0.24
PDCD6-209ENST00000512466 TNNQ9UQP3 1299 aa13.55□□□□□ -0.24
PDCD6-209ENST00000512466 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
PDCD6-209ENST00000512466 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
PDCD6-209ENST00000512466 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
PDCD6-209ENST00000512466 MLH3Q9UHC1 1453 aa13.53□□□□□ -0.24
PDCD6-209ENST00000512466 SEC24BO95487 1268 aa13.53□□□□□ -0.24
PDCD6-209ENST00000512466 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
PDCD6-209ENST00000512466 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
PDCD6-209ENST00000512466 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
PDCD6-209ENST00000512466 TRIM44Q96DX7 344 aaPredicted RBP13.53□□□□□ -0.24
PDCD6-209ENST00000512466 PZPP20742 1482 aa13.53□□□□□ -0.24
PDCD6-209ENST00000512466 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
PDCD6-209ENST00000512466 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.24
PDCD6-209ENST00000512466 SLFN5Q08AF3 891 aa13.52□□□□□ -0.24
PDCD6-209ENST00000512466 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.24
PDCD6-209ENST00000512466 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
PDCD6-209ENST00000512466 RWDD1Q9H446 243 aaPredicted RBP13.52□□□□□ -0.25
PDCD6-209ENST00000512466 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
PDCD6-209ENST00000512466 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
PDCD6-209ENST00000512466 SOX12O15370 315 aa13.51□□□□□ -0.25
PDCD6-209ENST00000512466 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
PDCD6-209ENST00000512466 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
PDCD6-209ENST00000512466 TESK2Q96S53 571 aa13.51□□□□□ -0.25
PDCD6-209ENST00000512466 PNNQ9H307 717 aaKnown RBP13.51□□□□□ -0.25
PDCD6-209ENST00000512466 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms