RNA–Protein interactions for RNA: ENST00000512189.1

LETM1-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 3

Gene LETM1, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-206ENST00000512189 ZFYVE9O95405 1425 aa21.9■■□□□ 1.1
LETM1-206ENST00000512189 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
LETM1-206ENST00000512189 ZNF142P52746 1687 aaPredicted RBP21.89■■□□□ 1.1
LETM1-206ENST00000512189 ZNF326Q5BKZ1 582 aaKnown RBP21.89■■□□□ 1.09
LETM1-206ENST00000512189 PIK3C2GO75747 1445 aa21.88■■□□□ 1.09
LETM1-206ENST00000512189 CEP170BQ9Y4F5 1589 aaPredicted RBP21.87■■□□□ 1.09
LETM1-206ENST00000512189 LAMC1P11047 1609 aa21.87■■□□□ 1.09
LETM1-206ENST00000512189 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
LETM1-206ENST00000512189 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
LETM1-206ENST00000512189 RIMS2Q9UQ26 1411 aa21.85■■□□□ 1.09
LETM1-206ENST00000512189 ADGRF5Q8IZF2 1346 aa21.84■■□□□ 1.09
LETM1-206ENST00000512189 STAG3Q9UJ98 1225 aa21.84■■□□□ 1.09
LETM1-206ENST00000512189 SLIT1O75093 1534 aa21.83■■□□□ 1.09
LETM1-206ENST00000512189 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
LETM1-206ENST00000512189 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
LETM1-206ENST00000512189 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
LETM1-206ENST00000512189 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
LETM1-206ENST00000512189 VGFO15240 615 aaPredicted RBP21.8■■□□□ 1.08
LETM1-206ENST00000512189 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
LETM1-206ENST00000512189 KDM4FA0A1W2PPD8 638 aa21.78■■□□□ 1.08
LETM1-206ENST00000512189 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
LETM1-206ENST00000512189 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.75■■□□□ 1.07
LETM1-206ENST00000512189 USP47Q96K76 1375 aa21.74■■□□□ 1.07
LETM1-206ENST00000512189 IQGAP1P46940 1657 aa21.74■■□□□ 1.07
LETM1-206ENST00000512189 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
LETM1-206ENST00000512189 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
LETM1-206ENST00000512189 NBPF1Q3BBV0 1214 aa21.73■■□□□ 1.07
LETM1-206ENST00000512189 NUTM2DQ5VT03 806 aaPredicted RBP21.73■■□□□ 1.07
LETM1-206ENST00000512189 CARD11Q9BXL7 1154 aa21.73■■□□□ 1.07
LETM1-206ENST00000512189 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
LETM1-206ENST00000512189 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
LETM1-206ENST00000512189 EIF4G2P78344 907 aaKnown RBP eCLIP21.72■■□□□ 1.07
LETM1-206ENST00000512189 C14orf93Q9H972 538 aaKnown RBP21.72■■□□□ 1.07
LETM1-206ENST00000512189 CFAP70Q5T0N1 1121 aa21.71■■□□□ 1.07
LETM1-206ENST00000512189 THEMISQ8N1K5 641 aaPredicted RBP21.71■■□□□ 1.07
LETM1-206ENST00000512189 SETD1AO15047 1707 aaKnown RBP21.71■■□□□ 1.07
LETM1-206ENST00000512189 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
LETM1-206ENST00000512189 ALKQ9UM73 1620 aa21.7■■□□□ 1.06
LETM1-206ENST00000512189 HSPA5P11021 654 aaKnown RBP21.7■■□□□ 1.06
LETM1-206ENST00000512189 PLEKHG1Q9ULL1 1385 aa21.7■■□□□ 1.06
LETM1-206ENST00000512189 HDGFP51858 240 aaKnown RBP21.69■■□□□ 1.06
LETM1-206ENST00000512189 LTKP29376 864 aa21.65■■□□□ 1.06
LETM1-206ENST00000512189 ADAMTS13Q76LX8 1427 aa21.64■■□□□ 1.06
LETM1-206ENST00000512189 DIP2AQ14689 1571 aa21.63■■□□□ 1.05
LETM1-206ENST00000512189 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
LETM1-206ENST00000512189 MED14O60244 1454 aa21.63■■□□□ 1.05
LETM1-206ENST00000512189 TXNDC2Q86VQ3 553 aa21.62■■□□□ 1.05
LETM1-206ENST00000512189 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
LETM1-206ENST00000512189 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
LETM1-206ENST00000512189 LMTK3Q96Q04 1460 aa21.59■■□□□ 1.05
LETM1-206ENST00000512189 POLR1AO95602 1720 aaPredicted RBP21.58■■□□□ 1.05
LETM1-206ENST00000512189 YTHDC2Q9H6S0 1430 aaKnown RBP21.58■■□□□ 1.05
LETM1-206ENST00000512189 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.04
LETM1-206ENST00000512189 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
LETM1-206ENST00000512189 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
LETM1-206ENST00000512189 TMEM132EQ6IEE7 984 aa21.56■■□□□ 1.04
LETM1-206ENST00000512189 LRPPRCP42704 1394 aaKnown RBP21.56■■□□□ 1.04
LETM1-206ENST00000512189 KNDC1Q76NI1 1749 aa21.55■■□□□ 1.04
LETM1-206ENST00000512189 ANKLE2Q86XL3 938 aa21.55■■□□□ 1.04
LETM1-206ENST00000512189 METP08581 1390 aa21.55■■□□□ 1.04
LETM1-206ENST00000512189 TECPR2O15040 1411 aa21.54■■□□□ 1.04
LETM1-206ENST00000512189 SBNO2Q9Y2G9 1366 aa21.53■■□□□ 1.04
LETM1-206ENST00000512189 TESK2Q96S53 571 aa21.53■■□□□ 1.04
LETM1-206ENST00000512189 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
LETM1-206ENST00000512189 CPS1P31327 1500 aa21.53■■□□□ 1.04
LETM1-206ENST00000512189 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
LETM1-206ENST00000512189 ABCC11Q96J66 1382 aa21.5■■□□□ 1.03
LETM1-206ENST00000512189 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
LETM1-206ENST00000512189 TBX22Q9Y458 520 aa21.5■■□□□ 1.03
LETM1-206ENST00000512189 QRICH2Q9H0J4 1663 aa21.5■■□□□ 1.03
LETM1-206ENST00000512189 TRAK1Q9UPV9 953 aa21.49■■□□□ 1.03
LETM1-206ENST00000512189 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
LETM1-206ENST00000512189 CENPJQ9HC77 1338 aaPredicted RBP21.49■■□□□ 1.03
LETM1-206ENST00000512189 PIK3R4Q99570 1358 aa21.48■■□□□ 1.03
LETM1-206ENST00000512189 BCANQ96GW7 911 aa21.48■■□□□ 1.03
LETM1-206ENST00000512189 XRN1Q8IZH2 1706 aaKnown RBP21.48■■□□□ 1.03
LETM1-206ENST00000512189 PTPRUQ92729 1446 aa21.47■■□□□ 1.03
LETM1-206ENST00000512189 C11orf95C9JLR9 678 aaPredicted RBP21.47■■□□□ 1.03
LETM1-206ENST00000512189 KIF7Q2M1P5 1343 aa21.47■■□□□ 1.03
LETM1-206ENST00000512189 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
LETM1-206ENST00000512189 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
LETM1-206ENST00000512189 SLC26A8Q96RN1 970 aa21.45■■□□□ 1.02
LETM1-206ENST00000512189 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
LETM1-206ENST00000512189 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
LETM1-206ENST00000512189 STK26Q9P289 416 aa21.43■■□□□ 1.02
LETM1-206ENST00000512189 SIRT1Q96EB6 747 aa21.42■■□□□ 1.02
LETM1-206ENST00000512189 NWD1Q149M9 1564 aa21.41■■□□□ 1.02
LETM1-206ENST00000512189 TULP4Q9NRJ4 1543 aa21.41■■□□□ 1.02
LETM1-206ENST00000512189 SLC24A1O60721 1099 aa21.41■■□□□ 1.02
LETM1-206ENST00000512189 HSPA2P54652 639 aa21.41■■□□□ 1.02
LETM1-206ENST00000512189 TMF1P82094 1093 aa21.41■■□□□ 1.02
LETM1-206ENST00000512189 ROBO2Q9HCK4 1378 aa21.39■■□□□ 1.02
LETM1-206ENST00000512189 PRAM1Q96QH2 718 aa21.39■■□□□ 1.01
LETM1-206ENST00000512189 PLEKHH1Q9ULM0 1364 aa21.38■■□□□ 1.01
LETM1-206ENST00000512189 STRCQ7RTU9 1775 aa21.38■■□□□ 1.01
LETM1-206ENST00000512189 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
LETM1-206ENST00000512189 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
LETM1-206ENST00000512189 AMOTL2Q9Y2J4 779 aa21.35■■□□□ 1.01
LETM1-206ENST00000512189 CDCA8Q53HL2 280 aa21.34■■□□□ 1.01
LETM1-206ENST00000512189 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms