RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SBF2Q86WG5 1849 aa3.11□□□□□ -1.91
TRAPPC13-211ENST00000512009 NALCNQ8IZF0 1738 aa3.11□□□□□ -1.91
TRAPPC13-211ENST00000512009 THSD7BQ9C0I4 1608 aa3.11□□□□□ -1.91
TRAPPC13-211ENST00000512009 FANCAO15360 1455 aa3.11□□□□□ -1.91
TRAPPC13-211ENST00000512009 N4BP2Q86UW6 1770 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-211ENST00000512009 SCAF1Q9H7N4 1312 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-211ENST00000512009 DUOX1Q9NRD9 1551 aa3.1□□□□□ -1.91
TRAPPC13-211ENST00000512009 TRIM41Q8WV44 630 aa3.1□□□□□ -1.91
TRAPPC13-211ENST00000512009 CARMIL2Q6F5E8 1435 aa3.1□□□□□ -1.91
TRAPPC13-211ENST00000512009 PLEKHG2Q9H7P9 1386 aa3.1□□□□□ -1.91
TRAPPC13-211ENST00000512009 MYO5BQ9ULV0 1848 aa3.1□□□□□ -1.91
TRAPPC13-211ENST00000512009 TSPOAP1O95153 1857 aa3.09□□□□□ -1.91
TRAPPC13-211ENST00000512009 BRCA1P38398 1863 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-211ENST00000512009 EHBP1L1Q8N3D4 1523 aa3.09□□□□□ -1.91
TRAPPC13-211ENST00000512009 LRRC9Q6ZRR7 1453 aa3.09□□□□□ -1.91
TRAPPC13-211ENST00000512009 AKAP12Q02952 1782 aa3.09□□□□□ -1.92
TRAPPC13-211ENST00000512009 FAM135BQ49AJ0 1406 aa3.09□□□□□ -1.92
TRAPPC13-211ENST00000512009 MIA2Q96PC5 1412 aa3.09□□□□□ -1.92
TRAPPC13-211ENST00000512009 PARP4Q9UKK3 1724 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 DNAH14Q0VDD8 3507 aa3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 MYOM3Q5VTT5 1437 aa3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 DDX60Q8IY21 1712 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 FMN2Q9NZ56 1722 aa3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 PIK3R4Q99570 1358 aa3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 HTTP42858 3142 aa3.08□□□□□ -1.92
TRAPPC13-211ENST00000512009 SPENQ96T58 3664 aaKnown RBP3.07□□□□□ -1.92
TRAPPC13-211ENST00000512009 NCAPD2Q15021 1401 aa3.07□□□□□ -1.92
TRAPPC13-211ENST00000512009 DLC1Q96QB1 1528 aa3.07□□□□□ -1.92
TRAPPC13-211ENST00000512009 CFAP54Q96N23 3096 aa3.07□□□□□ -1.92
TRAPPC13-211ENST00000512009 CARMIL1Q5VZK9 1371 aa3.07□□□□□ -1.92
TRAPPC13-211ENST00000512009 ADGRB1O14514 1584 aa3.07□□□□□ -1.92
TRAPPC13-211ENST00000512009 TRAPPC8Q9Y2L5 1435 aa3.06□□□□□ -1.92
TRAPPC13-211ENST00000512009 SHANK3Q9BYB0 1731 aa3.06□□□□□ -1.92
TRAPPC13-211ENST00000512009 IGSF5Q9NSI5 407 aa3.06□□□□□ -1.92
TRAPPC13-211ENST00000512009 SOCS7O14512 581 aa3.06□□□□□ -1.92
TRAPPC13-211ENST00000512009 DHX57Q6P158 1386 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-211ENST00000512009 NUP188Q5SRE5 1749 aa3.05□□□□□ -1.92
TRAPPC13-211ENST00000512009 DNAH12Q6ZR08 3092 aa3.05□□□□□ -1.92
TRAPPC13-211ENST00000512009 TULP4Q9NRJ4 1543 aa3.05□□□□□ -1.92
TRAPPC13-211ENST00000512009 VPS8Q8N3P4 1428 aa3.05□□□□□ -1.92
TRAPPC13-211ENST00000512009 JPH4Q96JJ6 628 aa3.05□□□□□ -1.92
TRAPPC13-211ENST00000512009 LOC105371045A0A1W2PR82 267 aa3.05□□□□□ -1.92
TRAPPC13-211ENST00000512009 PHLPP1O60346 1717 aa3.04□□□□□ -1.92
TRAPPC13-211ENST00000512009 BRWD3Q6RI45 1802 aa3.04□□□□□ -1.92
TRAPPC13-211ENST00000512009 SZT2Q5T011 3432 aa3.04□□□□□ -1.92
TRAPPC13-211ENST00000512009 HFM1A2PYH4 1435 aa3.04□□□□□ -1.92
TRAPPC13-211ENST00000512009 LY75O60449 1722 aa3.04□□□□□ -1.92
TRAPPC13-211ENST00000512009 ERBINQ96RT1 1412 aa3.04□□□□□ -1.92
TRAPPC13-211ENST00000512009 EYSQ5T1H1 3165 aa3.03□□□□□ -1.92
TRAPPC13-211ENST00000512009 PIK3C2AO00443 1686 aa3.03□□□□□ -1.92
TRAPPC13-211ENST00000512009 SETD5Q9C0A6 1442 aa3.03□□□□□ -1.92
TRAPPC13-211ENST00000512009 ARHGEF28Q8N1W1 1705 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-211ENST00000512009 FMN1Q68DA7 1419 aa3.03□□□□□ -1.92
TRAPPC13-211ENST00000512009 ZNF646O15015 1829 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 TMEM94Q12767 1356 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 DMDP11532 3685 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 ARFGEF2Q9Y6D5 1785 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 MAP2P11137 1827 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 MUC3AQ02505 3323 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 C4AP0C0L4 1744 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 C4BP0C0L5 1744 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 PTCH1Q13635 1447 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 MYOM2P54296 1465 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 FBXO41Q8TF61 875 aa3.02□□□□□ -1.93
TRAPPC13-211ENST00000512009 RBBP6Q7Z6E9 1792 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-211ENST00000512009 DLEC1Q9Y238 1755 aa3.01□□□□□ -1.93
TRAPPC13-211ENST00000512009 SMG6Q86US8 1419 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-211ENST00000512009 FAM208AQ9UK61 1670 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-211ENST00000512009 NRXN2Q9P2S2 1712 aa3.01□□□□□ -1.93
TRAPPC13-211ENST00000512009 ZFHX3Q15911 3703 aa3□□□□□ -1.93
TRAPPC13-211ENST00000512009 AATKQ6ZMQ8 1374 aa3□□□□□ -1.93
TRAPPC13-211ENST00000512009 SPEGQ15772 3267 aa3□□□□□ -1.93
TRAPPC13-211ENST00000512009 RGPD1P0DJD0 1748 aa3□□□□□ -1.93
TRAPPC13-211ENST00000512009 RGPD8O14715 1765 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-211ENST00000512009 RGPD5Q99666 1765 aa3□□□□□ -1.93
TRAPPC13-211ENST00000512009 YTHDC2Q9H6S0 1430 aaKnown RBP3□□□□□ -1.93
TRAPPC13-211ENST00000512009 ADAMTS13Q76LX8 1427 aa3□□□□□ -1.93
TRAPPC13-211ENST00000512009 MKI67P46013 3256 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-211ENST00000512009 ROBO1Q9Y6N7 1651 aa2.99□□□□□ -1.93
TRAPPC13-211ENST00000512009 ROCK1Q13464 1354 aa2.98□□□□□ -1.93
TRAPPC13-211ENST00000512009 RNF123Q5XPI4 1314 aa2.98□□□□□ -1.93
TRAPPC13-211ENST00000512009 RANBP2P49792 3224 aaKnown RBP2.98□□□□□ -1.93
TRAPPC13-211ENST00000512009 A2MP01023 1474 aa2.98□□□□□ -1.93
TRAPPC13-211ENST00000512009 SSC5DA1L4H1 1573 aa2.98□□□□□ -1.93
TRAPPC13-211ENST00000512009 NAIPQ13075 1403 aa2.97□□□□□ -1.93
TRAPPC13-211ENST00000512009 MON2Q7Z3U7 1717 aa2.97□□□□□ -1.93
TRAPPC13-211ENST00000512009 ITSN1Q15811 1721 aa2.97□□□□□ -1.93
TRAPPC13-211ENST00000512009 PCDH10Q9P2E7 1040 aa2.97□□□□□ -1.93
TRAPPC13-211ENST00000512009 DHX29Q7Z478 1369 aaKnown RBP2.97□□□□□ -1.93
TRAPPC13-211ENST00000512009 MAP3K5Q99683 1374 aa2.97□□□□□ -1.93
TRAPPC13-211ENST00000512009 TAF1LQ8IZX4 1826 aa2.96□□□□□ -1.93
TRAPPC13-211ENST00000512009 ADAMTSL1Q8N6G6 1762 aa2.96□□□□□ -1.94
TRAPPC13-211ENST00000512009 CCDC141Q6ZP82 1450 aa2.96□□□□□ -1.94
TRAPPC13-211ENST00000512009 PXDNQ92626 1479 aa2.96□□□□□ -1.94
TRAPPC13-211ENST00000512009 CHD4Q14839 1912 aa2.96□□□□□ -1.94
TRAPPC13-211ENST00000512009 TOGARAM1Q9Y4F4 1720 aa2.95□□□□□ -1.94
TRAPPC13-211ENST00000512009 SLIT3O75094 1523 aa2.95□□□□□ -1.94
TRAPPC13-211ENST00000512009 SLIT2O94813 1529 aa2.95□□□□□ -1.94
TRAPPC13-211ENST00000512009 SSH2Q76I76 1423 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms