RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 COL17A1Q9UMD9 1497 aaPredicted RBP22.63■■□□□ 1.21
CXCL3-204ENST00000511669 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
CXCL3-204ENST00000511669 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
CXCL3-204ENST00000511669 CFAP65Q6ZU64 1925 aaKnown RBP22.6■■□□□ 1.21
CXCL3-204ENST00000511669 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
CXCL3-204ENST00000511669 CHGAP10645 457 aaKnown RBP22.59■■□□□ 1.21
CXCL3-204ENST00000511669 PPLO60437 1756 aa22.59■■□□□ 1.21
CXCL3-204ENST00000511669 NRXN1Q9ULB1 1477 aa22.59■■□□□ 1.21
CXCL3-204ENST00000511669 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
CXCL3-204ENST00000511669 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
CXCL3-204ENST00000511669 SIGLEC1Q9BZZ2 1709 aa22.55■■□□□ 1.2
CXCL3-204ENST00000511669 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
CXCL3-204ENST00000511669 SYNMO15061 1565 aa22.55■■□□□ 1.2
CXCL3-204ENST00000511669 SETBP1Q9Y6X0 1596 aa22.55■■□□□ 1.2
CXCL3-204ENST00000511669 TESK2Q96S53 571 aa22.54■■□□□ 1.2
CXCL3-204ENST00000511669 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
CXCL3-204ENST00000511669 VGFO15240 615 aaPredicted RBP22.5■■□□□ 1.19
CXCL3-204ENST00000511669 RALBP1Q15311 655 aa22.5■■□□□ 1.19
CXCL3-204ENST00000511669 ADGRF5Q8IZF2 1346 aa22.5■■□□□ 1.19
CXCL3-204ENST00000511669 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
CXCL3-204ENST00000511669 PIK3C2GO75747 1445 aa22.48■■□□□ 1.19
CXCL3-204ENST00000511669 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
CXCL3-204ENST00000511669 MYO3AQ8NEV4 1616 aa22.45■■□□□ 1.18
CXCL3-204ENST00000511669 CLTCQ00610 1675 aaKnown RBP22.45■■□□□ 1.18
CXCL3-204ENST00000511669 ESF1Q9H501 851 aaKnown RBP22.45■■□□□ 1.18
CXCL3-204ENST00000511669 ZFYVE9O95405 1425 aa22.44■■□□□ 1.18
CXCL3-204ENST00000511669 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
CXCL3-204ENST00000511669 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
CXCL3-204ENST00000511669 KDM5AP29375 1690 aaKnown RBP22.44■■□□□ 1.18
CXCL3-204ENST00000511669 C14orf93Q9H972 538 aaKnown RBP22.42■■□□□ 1.18
CXCL3-204ENST00000511669 SBNO2Q9Y2G9 1366 aa22.42■■□□□ 1.18
CXCL3-204ENST00000511669 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
CXCL3-204ENST00000511669 IDI1Q13907 227 aa22.42■■□□□ 1.18
CXCL3-204ENST00000511669 MYBBP1AQ9BQG0 1328 aaKnown RBP22.42■■□□□ 1.18
CXCL3-204ENST00000511669 TMEM131LA2VDJ0 1609 aa22.41■■□□□ 1.18
CXCL3-204ENST00000511669 BRD4O60885 1362 aaPredicted RBP22.39■■□□□ 1.17
CXCL3-204ENST00000511669 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
CXCL3-204ENST00000511669 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
CXCL3-204ENST00000511669 FAM9BQ8IZU0 186 aa22.37■■□□□ 1.17
CXCL3-204ENST00000511669 STAG3Q9UJ98 1225 aa22.37■■□□□ 1.17
CXCL3-204ENST00000511669 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
CXCL3-204ENST00000511669 PANK3Q9H999 370 aa22.35■■□□□ 1.17
CXCL3-204ENST00000511669 ADGRB1O14514 1584 aa22.35■■□□□ 1.17
CXCL3-204ENST00000511669 MYO5BQ9ULV0 1848 aa22.35■■□□□ 1.17
CXCL3-204ENST00000511669 PARD3Q8TEW0 1356 aa22.34■■□□□ 1.17
CXCL3-204ENST00000511669 PER1O15534 1290 aaPredicted RBP22.33■■□□□ 1.17
CXCL3-204ENST00000511669 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
CXCL3-204ENST00000511669 NLRP13Q86W25 1043 aa22.32■■□□□ 1.16
CXCL3-204ENST00000511669 KNSTRNQ9Y448 316 aa22.32■■□□□ 1.16
CXCL3-204ENST00000511669 QRICH2Q9H0J4 1663 aa22.32■■□□□ 1.16
CXCL3-204ENST00000511669 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
CXCL3-204ENST00000511669 MLECQ14165 292 aa22.31■■□□□ 1.16
CXCL3-204ENST00000511669 MYOM1P52179 1685 aa22.29■■□□□ 1.16
CXCL3-204ENST00000511669 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
CXCL3-204ENST00000511669 NEFLP07196 543 aa22.28■■□□□ 1.16
CXCL3-204ENST00000511669 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
CXCL3-204ENST00000511669 FBXO31Q5XUX0 539 aaPredicted RBP22.28■■□□□ 1.16
CXCL3-204ENST00000511669 TRAK1Q9UPV9 953 aa22.28■■□□□ 1.16
CXCL3-204ENST00000511669 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
CXCL3-204ENST00000511669 PUS7Q96PZ0 661 aaKnown RBP22.26■■□□□ 1.15
CXCL3-204ENST00000511669 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
CXCL3-204ENST00000511669 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
CXCL3-204ENST00000511669 HDGFP51858 240 aaKnown RBP22.25■■□□□ 1.15
CXCL3-204ENST00000511669 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
CXCL3-204ENST00000511669 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.24■■□□□ 1.15
CXCL3-204ENST00000511669 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
CXCL3-204ENST00000511669 A2ML1A8K2U0 1454 aa22.23■■□□□ 1.15
CXCL3-204ENST00000511669 CC2D1BQ5T0F9 858 aaKnown RBP22.22■■□□□ 1.15
CXCL3-204ENST00000511669 TMEM132EQ6IEE7 984 aa22.21■■□□□ 1.15
CXCL3-204ENST00000511669 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
CXCL3-204ENST00000511669 NUTM2DQ5VT03 806 aaPredicted RBP22.2■■□□□ 1.15
CXCL3-204ENST00000511669 RIMS2Q9UQ26 1411 aa22.19■■□□□ 1.14
CXCL3-204ENST00000511669 INSRP06213 1382 aa22.19■■□□□ 1.14
CXCL3-204ENST00000511669 LRPPRCP42704 1394 aaKnown RBP22.19■■□□□ 1.14
CXCL3-204ENST00000511669 TNRQ92752 1358 aa22.19■■□□□ 1.14
CXCL3-204ENST00000511669 ALKQ9UM73 1620 aa22.18■■□□□ 1.14
CXCL3-204ENST00000511669 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
CXCL3-204ENST00000511669 YTHDC2Q9H6S0 1430 aaKnown RBP22.15■■□□□ 1.14
CXCL3-204ENST00000511669 NINLQ9Y2I6 1382 aa22.15■■□□□ 1.14
CXCL3-204ENST00000511669 AMER1Q5JTC6 1135 aaPredicted RBP22.14■■□□□ 1.14
CXCL3-204ENST00000511669 SUPT16HQ9Y5B9 1047 aaKnown RBP22.13■■□□□ 1.13
CXCL3-204ENST00000511669 NLRP1Q9C000 1473 aa22.12■■□□□ 1.13
CXCL3-204ENST00000511669 DLC1Q96QB1 1528 aa22.11■■□□□ 1.13
CXCL3-204ENST00000511669 POGKQ9P215 609 aa22.11■■□□□ 1.13
CXCL3-204ENST00000511669 USP32Q8NFA0 1604 aa22.09■■□□□ 1.13
CXCL3-204ENST00000511669 PTPRMP28827 1452 aa22.09■■□□□ 1.13
CXCL3-204ENST00000511669 STK26Q9P289 416 aa22.09■■□□□ 1.13
CXCL3-204ENST00000511669 FER1L4A9Z1Z3 1794 aa22.08■■□□□ 1.13
CXCL3-204ENST00000511669 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.13
CXCL3-204ENST00000511669 TULP4Q9NRJ4 1543 aa22.08■■□□□ 1.13
CXCL3-204ENST00000511669 UBR1Q8IWV7 1749 aa22.08■■□□□ 1.12
CXCL3-204ENST00000511669 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
CXCL3-204ENST00000511669 SETD1AO15047 1707 aaKnown RBP22.05■■□□□ 1.12
CXCL3-204ENST00000511669 FKBP8Q14318 412 aa22.05■■□□□ 1.12
CXCL3-204ENST00000511669 SMG6Q86US8 1419 aaKnown RBP22.04■■□□□ 1.12
CXCL3-204ENST00000511669 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
CXCL3-204ENST00000511669 NSD2O96028 1365 aa22.04■■□□□ 1.12
CXCL3-204ENST00000511669 ANKRD36BQ8N2N9 1353 aa22.04■■□□□ 1.12
CXCL3-204ENST00000511669 PRAM1Q96QH2 718 aa22.03■■□□□ 1.12
CXCL3-204ENST00000511669 NSD3Q9BZ95 1437 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms