RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
COL6A6-203ENST00000511332 NEXMIFQ5QGS0 1516 aa18.9■□□□□ 0.62
COL6A6-203ENST00000511332 ANKRD30BQ9BXX2 1392 aa18.89■□□□□ 0.61
COL6A6-203ENST00000511332 HDGFP51858 240 aaKnown RBP18.86■□□□□ 0.61
COL6A6-203ENST00000511332 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
COL6A6-203ENST00000511332 PCGF6Q9BYE7 350 aa18.86■□□□□ 0.61
COL6A6-203ENST00000511332 SPATA31E1Q6ZUB1 1445 aa18.85■□□□□ 0.61
COL6A6-203ENST00000511332 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL6A6-203ENST00000511332 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
COL6A6-203ENST00000511332 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
COL6A6-203ENST00000511332 ZNF326Q5BKZ1 582 aaKnown RBP18.84■□□□□ 0.61
COL6A6-203ENST00000511332 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
COL6A6-203ENST00000511332 LTKP29376 864 aa18.83■□□□□ 0.6
COL6A6-203ENST00000511332 PLEKHG1Q9ULL1 1385 aa18.82■□□□□ 0.6
COL6A6-203ENST00000511332 SETBP1Q9Y6X0 1596 aa18.82■□□□□ 0.6
COL6A6-203ENST00000511332 NRXN3Q9Y4C0 1643 aa18.81■□□□□ 0.6
COL6A6-203ENST00000511332 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
COL6A6-203ENST00000511332 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
COL6A6-203ENST00000511332 MYOM2P54296 1465 aa18.77■□□□□ 0.59
COL6A6-203ENST00000511332 LAMC1P11047 1609 aa18.76■□□□□ 0.59
COL6A6-203ENST00000511332 CHD2O14647 1828 aaKnown RBP18.76■□□□□ 0.59
COL6A6-203ENST00000511332 STRCP1A6NGW2 1772 aa18.76■□□□□ 0.59
COL6A6-203ENST00000511332 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
COL6A6-203ENST00000511332 CPS1P31327 1500 aa18.74■□□□□ 0.59
COL6A6-203ENST00000511332 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
COL6A6-203ENST00000511332 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
COL6A6-203ENST00000511332 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
COL6A6-203ENST00000511332 BCANQ96GW7 911 aa18.74■□□□□ 0.59
COL6A6-203ENST00000511332 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
COL6A6-203ENST00000511332 ADAMTS13Q76LX8 1427 aa18.73■□□□□ 0.59
COL6A6-203ENST00000511332 ALKQ9UM73 1620 aa18.7■□□□□ 0.58
COL6A6-203ENST00000511332 NRXN1Q9ULB1 1477 aa18.7■□□□□ 0.58
COL6A6-203ENST00000511332 ZNF335Q9H4Z2 1342 aaPredicted RBP18.7■□□□□ 0.58
COL6A6-203ENST00000511332 PIK3C2GO75747 1445 aa18.69■□□□□ 0.58
COL6A6-203ENST00000511332 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
COL6A6-203ENST00000511332 XRN1Q8IZH2 1706 aaKnown RBP18.69■□□□□ 0.58
COL6A6-203ENST00000511332 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
COL6A6-203ENST00000511332 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
COL6A6-203ENST00000511332 IQSEC2Q5JU85 1478 aa18.67■□□□□ 0.58
COL6A6-203ENST00000511332 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
COL6A6-203ENST00000511332 STAC3Q96MF2 364 aa18.65■□□□□ 0.58
COL6A6-203ENST00000511332 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
COL6A6-203ENST00000511332 KIAA1210Q9ULL0 1709 aa18.65■□□□□ 0.58
COL6A6-203ENST00000511332 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
COL6A6-203ENST00000511332 KNDC1Q76NI1 1749 aa18.64■□□□□ 0.57
COL6A6-203ENST00000511332 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
COL6A6-203ENST00000511332 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
COL6A6-203ENST00000511332 LRRC7Q96NW7 1537 aa18.61■□□□□ 0.57
COL6A6-203ENST00000511332 DCAF11Q8TEB1 546 aa18.61■□□□□ 0.57
COL6A6-203ENST00000511332 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
COL6A6-203ENST00000511332 ASXL1Q8IXJ9 1541 aa18.6■□□□□ 0.57
COL6A6-203ENST00000511332 KCNA6P17658 529 aa18.6■□□□□ 0.57
COL6A6-203ENST00000511332 METP08581 1390 aa18.59■□□□□ 0.57
COL6A6-203ENST00000511332 NEUROD1Q13562 356 aa18.59■□□□□ 0.57
COL6A6-203ENST00000511332 PRAG1Q86YV5 1406 aa18.58■□□□□ 0.57
COL6A6-203ENST00000511332 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
COL6A6-203ENST00000511332 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
COL6A6-203ENST00000511332 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
COL6A6-203ENST00000511332 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
COL6A6-203ENST00000511332 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
COL6A6-203ENST00000511332 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
COL6A6-203ENST00000511332 ADGRB1O14514 1584 aa18.55■□□□□ 0.56
COL6A6-203ENST00000511332 CCER1Q8TC90 406 aaPredicted RBP18.54■□□□□ 0.56
COL6A6-203ENST00000511332 NALCNQ8IZF0 1738 aa18.53■□□□□ 0.56
COL6A6-203ENST00000511332 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
COL6A6-203ENST00000511332 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
COL6A6-203ENST00000511332 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
COL6A6-203ENST00000511332 TECPR2O15040 1411 aa18.52■□□□□ 0.56
COL6A6-203ENST00000511332 TMEM94Q12767 1356 aa18.52■□□□□ 0.55
COL6A6-203ENST00000511332 YTHDC2Q9H6S0 1430 aaKnown RBP18.51■□□□□ 0.55
COL6A6-203ENST00000511332 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
COL6A6-203ENST00000511332 LRPPRCP42704 1394 aaKnown RBP18.51■□□□□ 0.55
COL6A6-203ENST00000511332 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
COL6A6-203ENST00000511332 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
COL6A6-203ENST00000511332 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
COL6A6-203ENST00000511332 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
COL6A6-203ENST00000511332 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
COL6A6-203ENST00000511332 ABCC11Q96J66 1382 aa18.47■□□□□ 0.55
COL6A6-203ENST00000511332 MSH6P52701 1360 aa18.46■□□□□ 0.55
COL6A6-203ENST00000511332 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
COL6A6-203ENST00000511332 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
COL6A6-203ENST00000511332 DCCP43146 1447 aa18.45■□□□□ 0.54
COL6A6-203ENST00000511332 FAM135BQ49AJ0 1406 aa18.45■□□□□ 0.54
COL6A6-203ENST00000511332 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
COL6A6-203ENST00000511332 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
COL6A6-203ENST00000511332 RALGAPBQ86X10 1494 aa18.44■□□□□ 0.54
COL6A6-203ENST00000511332 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
COL6A6-203ENST00000511332 C14orf37Q86TY3 774 aa18.42■□□□□ 0.54
COL6A6-203ENST00000511332 STK26Q9P289 416 aa18.42■□□□□ 0.54
COL6A6-203ENST00000511332 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
COL6A6-203ENST00000511332 FBXO41Q8TF61 875 aa18.4■□□□□ 0.54
COL6A6-203ENST00000511332 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
COL6A6-203ENST00000511332 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
COL6A6-203ENST00000511332 QRICH2Q9H0J4 1663 aa18.39■□□□□ 0.53
COL6A6-203ENST00000511332 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
COL6A6-203ENST00000511332 TOM1O60784 492 aa18.39■□□□□ 0.53
COL6A6-203ENST00000511332 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
COL6A6-203ENST00000511332 SIRT1Q96EB6 747 aa18.38■□□□□ 0.53
COL6A6-203ENST00000511332 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
COL6A6-203ENST00000511332 GPRASP1Q5JY77 1395 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms