RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 POM121Q96HA1 1249 aa10.13□□□□□ -0.79
HMGB1P47-201ENST00000511281 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
HMGB1P47-201ENST00000511281 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
HMGB1P47-201ENST00000511281 PTPREP23469 700 aa10.12□□□□□ -0.79
HMGB1P47-201ENST00000511281 RSBN1LQ6PCB5 846 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P47-201ENST00000511281 MAMSTRQ6ZN01 415 aa10.1□□□□□ -0.79
HMGB1P47-201ENST00000511281 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
HMGB1P47-201ENST00000511281 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
HMGB1P47-201ENST00000511281 TATDN2Q93075 761 aa10.1□□□□□ -0.79
HMGB1P47-201ENST00000511281 SNRKQ9NRH2 765 aa10.1□□□□□ -0.79
HMGB1P47-201ENST00000511281 C3orf80F5H4A9 247 aa10.09□□□□□ -0.79
HMGB1P47-201ENST00000511281 POTEB2H3BUK9 544 aa10.09□□□□□ -0.79
HMGB1P47-201ENST00000511281 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
HMGB1P47-201ENST00000511281 PACS2Q86VP3 889 aa10.08□□□□□ -0.8
HMGB1P47-201ENST00000511281 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
HMGB1P47-201ENST00000511281 LILRB3O75022 631 aa10.07□□□□□ -0.8
HMGB1P47-201ENST00000511281 HOXB1P14653 301 aaPredicted RBP10.07□□□□□ -0.8
HMGB1P47-201ENST00000511281 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
HMGB1P47-201ENST00000511281 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
HMGB1P47-201ENST00000511281 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
HMGB1P47-201ENST00000511281 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
HMGB1P47-201ENST00000511281 PRPF38BQ5VTL8 546 aaKnown RBP10.06□□□□□ -0.8
HMGB1P47-201ENST00000511281 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
HMGB1P47-201ENST00000511281 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
HMGB1P47-201ENST00000511281 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
HMGB1P47-201ENST00000511281 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
HMGB1P47-201ENST00000511281 ZNF777Q9ULD5 760 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P47-201ENST00000511281 SNPHO15079 494 aa10.04□□□□□ -0.8
HMGB1P47-201ENST00000511281 USP46P62068 366 aa10.04□□□□□ -0.8
HMGB1P47-201ENST00000511281 TRIM26Q12899 539 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P47-201ENST00000511281 HRCP23327 699 aa10.02□□□□□ -0.81
HMGB1P47-201ENST00000511281 QPCTQ16769 361 aa10.02□□□□□ -0.81
HMGB1P47-201ENST00000511281 KDM4AO75164 1064 aa10.01□□□□□ -0.81
HMGB1P47-201ENST00000511281 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P47-201ENST00000511281 NDUFV2P19404 249 aa10□□□□□ -0.81
HMGB1P47-201ENST00000511281 GCGRP47871 477 aa10□□□□□ -0.81
HMGB1P47-201ENST00000511281 ZNF330Q9Y3S2 320 aaPredicted RBP10□□□□□ -0.81
HMGB1P47-201ENST00000511281 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
HMGB1P47-201ENST00000511281 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
HMGB1P47-201ENST00000511281 ZBED2Q9BTP6 218 aa9.99□□□□□ -0.81
HMGB1P47-201ENST00000511281 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
HMGB1P47-201ENST00000511281 PRM3Q9NNZ6 103 aa9.99□□□□□ -0.81
HMGB1P47-201ENST00000511281 HOXA2O43364 376 aa9.98□□□□□ -0.81
HMGB1P47-201ENST00000511281 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
HMGB1P47-201ENST00000511281 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P47-201ENST00000511281 RSPH4AQ5TD94 716 aa9.98□□□□□ -0.81
HMGB1P47-201ENST00000511281 GDPD2Q9HCC8 539 aa9.98□□□□□ -0.81
HMGB1P47-201ENST00000511281 WWC1Q8IX03 1113 aa9.97□□□□□ -0.81
HMGB1P47-201ENST00000511281 ZBTB3Q9H5J0 574 aa9.97□□□□□ -0.81
HMGB1P47-201ENST00000511281 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
HMGB1P47-201ENST00000511281 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
HMGB1P47-201ENST00000511281 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
HMGB1P47-201ENST00000511281 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
HMGB1P47-201ENST00000511281 SMAPO00193 183 aa9.95□□□□□ -0.82
HMGB1P47-201ENST00000511281 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P47-201ENST00000511281 TRAIPQ9BWF2 469 aa9.95□□□□□ -0.82
HMGB1P47-201ENST00000511281 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
HMGB1P47-201ENST00000511281 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
HMGB1P47-201ENST00000511281 AP1G2O75843 785 aa9.94□□□□□ -0.82
HMGB1P47-201ENST00000511281 SLC10A3P09131 477 aa9.94□□□□□ -0.82
HMGB1P47-201ENST00000511281 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
HMGB1P47-201ENST00000511281 FDX1P10109 184 aa9.93□□□□□ -0.82
HMGB1P47-201ENST00000511281 CABLES1Q8TDN4 633 aa9.93□□□□□ -0.82
HMGB1P47-201ENST00000511281 PCDHGC3Q9UN70 934 aa9.93□□□□□ -0.82
HMGB1P47-201ENST00000511281 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P47-201ENST00000511281 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P47-201ENST00000511281 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P47-201ENST00000511281 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P47-201ENST00000511281 TBC1D2BQ9UPU7 963 aa9.92□□□□□ -0.82
HMGB1P47-201ENST00000511281 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P47-201ENST00000511281 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
HMGB1P47-201ENST00000511281 ABL2P42684 1182 aa9.9□□□□□ -0.82
HMGB1P47-201ENST00000511281 SWT1Q5T5J6 900 aaKnown RBP9.9□□□□□ -0.82
HMGB1P47-201ENST00000511281 GPR37L1O60883 481 aa9.89□□□□□ -0.83
HMGB1P47-201ENST00000511281 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
HMGB1P47-201ENST00000511281 IRF5Q13568 498 aa9.88□□□□□ -0.83
HMGB1P47-201ENST00000511281 MTMR2Q13614 643 aa9.88□□□□□ -0.83
HMGB1P47-201ENST00000511281 FAM98CQ17RN3 349 aaKnown RBP9.88□□□□□ -0.83
HMGB1P47-201ENST00000511281 GLMNQ92990 594 aa9.88□□□□□ -0.83
HMGB1P47-201ENST00000511281 TRIM34Q9BYJ4 488 aa9.88□□□□□ -0.83
HMGB1P47-201ENST00000511281 ZBTB7CA1YPR0 619 aa9.87□□□□□ -0.83
HMGB1P47-201ENST00000511281 WASHC4Q2M389 1173 aa9.87□□□□□ -0.83
HMGB1P47-201ENST00000511281 POTEEQ6S8J3 1075 aa9.87□□□□□ -0.83
HMGB1P47-201ENST00000511281 NECTIN2Q92692 538 aa9.87□□□□□ -0.83
HMGB1P47-201ENST00000511281 CALR3Q96L12 384 aaKnown RBP9.87□□□□□ -0.83
HMGB1P47-201ENST00000511281 POM121CA8CG34 1229 aa9.86□□□□□ -0.83
HMGB1P47-201ENST00000511281 PSEN2P49810 448 aa9.86□□□□□ -0.83
HMGB1P47-201ENST00000511281 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
HMGB1P47-201ENST00000511281 LAPTM4BQ86VI4 370 aa9.86□□□□□ -0.83
HMGB1P47-201ENST00000511281 SLF2Q8IX21 1173 aa9.86□□□□□ -0.83
HMGB1P47-201ENST00000511281 HELBQ8NG08 1087 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P47-201ENST00000511281 PBX2P40425 430 aa9.85□□□□□ -0.83
HMGB1P47-201ENST00000511281 SLC4A3P48751 1232 aa9.85□□□□□ -0.83
HMGB1P47-201ENST00000511281 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
HMGB1P47-201ENST00000511281 KCTD17Q8N5Z5 321 aa9.85□□□□□ -0.83
HMGB1P47-201ENST00000511281 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
HMGB1P47-201ENST00000511281 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
HMGB1P47-201ENST00000511281 HMX1Q9NP08 348 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P47-201ENST00000511281 HLA-CQ95604 372 aa9.83□□□□□ -0.84
HMGB1P47-201ENST00000511281 CFAP99D6REC4 459 aa9.82□□□□□ -0.84
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