RNA–Protein interactions for RNA: ENST00000510598.5

LEMD2-208, Transcript of LEM domain containing 2, humanhuman

TSL 1 (best)

Gene LEMD2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-208ENST00000510598 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
LEMD2-208ENST00000510598 PROSER2Q86WR7 435 aaPredicted RBP14.19□□□□□ -0.14
LEMD2-208ENST00000510598 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
LEMD2-208ENST00000510598 SHPRHQ149N8 1683 aa14.19□□□□□ -0.14
LEMD2-208ENST00000510598 MSH6P52701 1360 aa14.19□□□□□ -0.14
LEMD2-208ENST00000510598 JCADQ9P266 1359 aa14.19□□□□□ -0.14
LEMD2-208ENST00000510598 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
LEMD2-208ENST00000510598 SLC26A8Q96RN1 970 aa14.18□□□□□ -0.14
LEMD2-208ENST00000510598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
LEMD2-208ENST00000510598 SLC52A1Q9NWF4 448 aa14.18□□□□□ -0.14
LEMD2-208ENST00000510598 PLEKHG1Q9ULL1 1385 aa14.18□□□□□ -0.14
LEMD2-208ENST00000510598 AHDC1Q5TGY3 1603 aaPredicted RBP14.17□□□□□ -0.14
LEMD2-208ENST00000510598 DIP2AQ14689 1571 aa14.17□□□□□ -0.14
LEMD2-208ENST00000510598 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
LEMD2-208ENST00000510598 UNC13BO14795 1591 aa14.15□□□□□ -0.14
LEMD2-208ENST00000510598 LRP6O75581 1613 aa14.15□□□□□ -0.14
LEMD2-208ENST00000510598 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
LEMD2-208ENST00000510598 RBM33Q96EV2 1170 aaKnown RBP14.13□□□□□ -0.15
LEMD2-208ENST00000510598 RIMS2Q9UQ26 1411 aa14.13□□□□□ -0.15
LEMD2-208ENST00000510598 E9PCH4 1651 aa14.12□□□□□ -0.15
LEMD2-208ENST00000510598 SPATA31A6Q5VVP1 1343 aa14.12□□□□□ -0.15
LEMD2-208ENST00000510598 PIK3R4Q99570 1358 aa14.11□□□□□ -0.15
LEMD2-208ENST00000510598 ADAMTS13Q76LX8 1427 aa14.11□□□□□ -0.15
LEMD2-208ENST00000510598 ANKRD50Q9ULJ7 1429 aa14.1□□□□□ -0.15
LEMD2-208ENST00000510598 TBX22Q9Y458 520 aa14.1□□□□□ -0.15
LEMD2-208ENST00000510598 IQGAP3Q86VI3 1631 aa14.08□□□□□ -0.15
LEMD2-208ENST00000510598 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
LEMD2-208ENST00000510598 XRN1Q8IZH2 1706 aaKnown RBP14.08□□□□□ -0.16
LEMD2-208ENST00000510598 LOC105371045A0A1W2PR82 267 aa14.08□□□□□ -0.16
LEMD2-208ENST00000510598 CHIC2Q9UKJ5 165 aa14.08□□□□□ -0.16
LEMD2-208ENST00000510598 TRPM2O94759 1503 aa14.08□□□□□ -0.16
LEMD2-208ENST00000510598 NHSL1Q5SYE7 1610 aa14.08□□□□□ -0.16
LEMD2-208ENST00000510598 HDGFP51858 240 aaKnown RBP14.07□□□□□ -0.16
LEMD2-208ENST00000510598 DCCP43146 1447 aa14.07□□□□□ -0.16
LEMD2-208ENST00000510598 NRXN3Q9Y4C0 1643 aa14.06□□□□□ -0.16
LEMD2-208ENST00000510598 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
LEMD2-208ENST00000510598 CADPS2Q86UW7 1296 aa14.05□□□□□ -0.16
LEMD2-208ENST00000510598 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.05□□□□□ -0.16
LEMD2-208ENST00000510598 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
LEMD2-208ENST00000510598 APLP2Q06481 763 aa14.04□□□□□ -0.16
LEMD2-208ENST00000510598 UPF1Q92900 1129 aaKnown RBP eCLIP14.04□□□□□ -0.16
LEMD2-208ENST00000510598 BCANQ96GW7 911 aa14.04□□□□□ -0.16
LEMD2-208ENST00000510598 C19orf44Q9H6X5 657 aa14.04□□□□□ -0.16
LEMD2-208ENST00000510598 SETBP1Q9Y6X0 1596 aa14.04□□□□□ -0.16
LEMD2-208ENST00000510598 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
LEMD2-208ENST00000510598 PTPRUQ92729 1446 aa14.02□□□□□ -0.16
LEMD2-208ENST00000510598 SETD5Q9C0A6 1442 aa14.02□□□□□ -0.16
LEMD2-208ENST00000510598 LAMC1P11047 1609 aa14.01□□□□□ -0.17
LEMD2-208ENST00000510598 SPHKAPQ2M3C7 1700 aa14□□□□□ -0.17
LEMD2-208ENST00000510598 MST1RQ04912 1400 aa13.99□□□□□ -0.17
LEMD2-208ENST00000510598 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
LEMD2-208ENST00000510598 ATF3P18847 181 aa13.99□□□□□ -0.17
LEMD2-208ENST00000510598 MEX3CQ5U5Q3 659 aaKnown RBP13.99□□□□□ -0.17
LEMD2-208ENST00000510598 BRINP3Q76B58 766 aa13.99□□□□□ -0.17
LEMD2-208ENST00000510598 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
LEMD2-208ENST00000510598 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
LEMD2-208ENST00000510598 RXRBP28702 533 aa13.96□□□□□ -0.17
LEMD2-208ENST00000510598 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
LEMD2-208ENST00000510598 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
LEMD2-208ENST00000510598 ADGRL3Q9HAR2 1447 aa13.95□□□□□ -0.18
LEMD2-208ENST00000510598 RGS12O14924 1447 aa13.94□□□□□ -0.18
LEMD2-208ENST00000510598 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
LEMD2-208ENST00000510598 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
LEMD2-208ENST00000510598 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
LEMD2-208ENST00000510598 PNPLA6Q8IY17 1366 aa13.93□□□□□ -0.18
LEMD2-208ENST00000510598 AFF2P51816 1311 aa13.92□□□□□ -0.18
LEMD2-208ENST00000510598 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
LEMD2-208ENST00000510598 KIF1BO60333 1816 aa13.91□□□□□ -0.18
LEMD2-208ENST00000510598 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
LEMD2-208ENST00000510598 CLTCL1P53675 1640 aa13.9□□□□□ -0.18
LEMD2-208ENST00000510598 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
LEMD2-208ENST00000510598 LRRC59Q96AG4 307 aaKnown RBP13.9□□□□□ -0.18
LEMD2-208ENST00000510598 NUP155O75694 1391 aa13.9□□□□□ -0.18
LEMD2-208ENST00000510598 METP08581 1390 aa13.9□□□□□ -0.18
LEMD2-208ENST00000510598 NUTM2BA6NNL0 878 aaPredicted RBP13.89□□□□□ -0.19
LEMD2-208ENST00000510598 NUTM2EB1AL46 878 aaPredicted RBP13.89□□□□□ -0.19
LEMD2-208ENST00000510598 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
LEMD2-208ENST00000510598 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
LEMD2-208ENST00000510598 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
LEMD2-208ENST00000510598 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
LEMD2-208ENST00000510598 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
LEMD2-208ENST00000510598 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
LEMD2-208ENST00000510598 SOS2Q07890 1332 aaPredicted RBP13.84□□□□□ -0.19
LEMD2-208ENST00000510598 C8orf37Q96NL8 207 aa13.83□□□□□ -0.2
LEMD2-208ENST00000510598 PPLO60437 1756 aa13.83□□□□□ -0.2
LEMD2-208ENST00000510598 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
LEMD2-208ENST00000510598 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.82□□□□□ -0.2
LEMD2-208ENST00000510598 DDX17Q92841 729 aaKnown RBP13.82□□□□□ -0.2
LEMD2-208ENST00000510598 ATRNO75882 1429 aa13.81□□□□□ -0.2
LEMD2-208ENST00000510598 CDC42BPGQ6DT37 1551 aa13.81□□□□□ -0.2
LEMD2-208ENST00000510598 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
LEMD2-208ENST00000510598 MYOM2P54296 1465 aa13.8□□□□□ -0.2
LEMD2-208ENST00000510598 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
LEMD2-208ENST00000510598 FNBP4Q8N3X1 1017 aaPredicted RBP13.79□□□□□ -0.2
LEMD2-208ENST00000510598 ROBO2Q9HCK4 1378 aa13.79□□□□□ -0.2
LEMD2-208ENST00000510598 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
LEMD2-208ENST00000510598 PXDNQ92626 1479 aa13.77□□□□□ -0.21
LEMD2-208ENST00000510598 TRPC5Q9UL62 973 aaPredicted RBP13.77□□□□□ -0.21
LEMD2-208ENST00000510598 ADAMTS2O95450 1211 aa13.76□□□□□ -0.21
LEMD2-208ENST00000510598 USP21Q9UK80 565 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms