RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 NLRP13Q86W25 1043 aa22.41■■□□□ 1.18
CLMAT3-201ENST00000510576 FRMPD1Q5SYB0 1578 aa22.4■■□□□ 1.18
CLMAT3-201ENST00000510576 DIP2BQ9P265 1576 aa22.4■■□□□ 1.18
CLMAT3-201ENST00000510576 ABCA6Q8N139 1617 aa22.39■■□□□ 1.17
CLMAT3-201ENST00000510576 PANK3Q9H999 370 aa22.38■■□□□ 1.17
CLMAT3-201ENST00000510576 NEO1Q92859 1461 aa22.38■■□□□ 1.17
CLMAT3-201ENST00000510576 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
CLMAT3-201ENST00000510576 FAM69CQ0P6D2 419 aa22.36■■□□□ 1.17
CLMAT3-201ENST00000510576 NUDCQ9Y266 331 aa22.36■■□□□ 1.17
CLMAT3-201ENST00000510576 SYNMO15061 1565 aa22.36■■□□□ 1.17
CLMAT3-201ENST00000510576 CDCA8Q53HL2 280 aa22.34■■□□□ 1.17
CLMAT3-201ENST00000510576 KIF13AQ9H1H9 1805 aa22.33■■□□□ 1.17
CLMAT3-201ENST00000510576 ADGRB3O60242 1522 aa22.33■■□□□ 1.17
CLMAT3-201ENST00000510576 CC2D1BQ5T0F9 858 aaKnown RBP22.32■■□□□ 1.16
CLMAT3-201ENST00000510576 PPP4R2Q9NY27 417 aa22.32■■□□□ 1.16
CLMAT3-201ENST00000510576 GLI2P10070 1586 aa22.32■■□□□ 1.16
CLMAT3-201ENST00000510576 CFAP65Q6ZU64 1925 aaKnown RBP22.32■■□□□ 1.16
CLMAT3-201ENST00000510576 KDM5AP29375 1690 aaKnown RBP22.32■■□□□ 1.16
CLMAT3-201ENST00000510576 MYOM1P52179 1685 aa22.3■■□□□ 1.16
CLMAT3-201ENST00000510576 NRXN1Q9ULB1 1477 aa22.29■■□□□ 1.16
CLMAT3-201ENST00000510576 CAMSAP1Q5T5Y3 1602 aa22.29■■□□□ 1.16
CLMAT3-201ENST00000510576 ABCC3O15438 1527 aa22.29■■□□□ 1.16
CLMAT3-201ENST00000510576 NPATQ14207 1427 aa22.29■■□□□ 1.16
CLMAT3-201ENST00000510576 PPLO60437 1756 aa22.29■■□□□ 1.16
CLMAT3-201ENST00000510576 RICTORQ6R327 1708 aa22.28■■□□□ 1.16
CLMAT3-201ENST00000510576 ADGRF5Q8IZF2 1346 aa22.28■■□□□ 1.16
CLMAT3-201ENST00000510576 GGT6Q6P531 493 aa22.28■■□□□ 1.16
CLMAT3-201ENST00000510576 DIP2CQ9Y2E4 1556 aa22.28■■□□□ 1.16
CLMAT3-201ENST00000510576 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.15
CLMAT3-201ENST00000510576 CFAP70Q5T0N1 1121 aa22.27■■□□□ 1.15
CLMAT3-201ENST00000510576 ZMYM4Q5VZL5 1548 aa22.26■■□□□ 1.15
CLMAT3-201ENST00000510576 MYO3AQ8NEV4 1616 aa22.26■■□□□ 1.15
CLMAT3-201ENST00000510576 INSRP06213 1382 aa22.25■■□□□ 1.15
CLMAT3-201ENST00000510576 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
CLMAT3-201ENST00000510576 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
CLMAT3-201ENST00000510576 SETBP1Q9Y6X0 1596 aa22.24■■□□□ 1.15
CLMAT3-201ENST00000510576 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
CLMAT3-201ENST00000510576 NOS1P29475 1434 aa22.24■■□□□ 1.15
CLMAT3-201ENST00000510576 RAPGEF3O95398 923 aa22.23■■□□□ 1.15
CLMAT3-201ENST00000510576 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
CLMAT3-201ENST00000510576 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
CLMAT3-201ENST00000510576 ASXL1Q8IXJ9 1541 aa22.22■■□□□ 1.15
CLMAT3-201ENST00000510576 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
CLMAT3-201ENST00000510576 SIGLEC1Q9BZZ2 1709 aa22.21■■□□□ 1.15
CLMAT3-201ENST00000510576 BLMP54132 1417 aaPredicted RBP22.2■■□□□ 1.14
CLMAT3-201ENST00000510576 ERVK-7P63135 1459 aa22.2■■□□□ 1.14
CLMAT3-201ENST00000510576 TSPOAP1O95153 1857 aa22.2■■□□□ 1.14
CLMAT3-201ENST00000510576 PIK3C2BO00750 1634 aa22.19■■□□□ 1.14
CLMAT3-201ENST00000510576 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
CLMAT3-201ENST00000510576 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
CLMAT3-201ENST00000510576 PDE3BQ13370 1112 aa22.17■■□□□ 1.14
CLMAT3-201ENST00000510576 RPGRIP1LQ68CZ1 1315 aa22.16■■□□□ 1.14
CLMAT3-201ENST00000510576 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
CLMAT3-201ENST00000510576 SBNO2Q9Y2G9 1366 aa22.15■■□□□ 1.14
CLMAT3-201ENST00000510576 QRICH2Q9H0J4 1663 aa22.14■■□□□ 1.14
CLMAT3-201ENST00000510576 PPP2R1AP30153 589 aa22.14■■□□□ 1.13
CLMAT3-201ENST00000510576 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.13
CLMAT3-201ENST00000510576 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
CLMAT3-201ENST00000510576 RBM19Q9Y4C8 960 aaKnown RBP22.12■■□□□ 1.13
CLMAT3-201ENST00000510576 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
CLMAT3-201ENST00000510576 ADGRB1O14514 1584 aa22.12■■□□□ 1.13
CLMAT3-201ENST00000510576 YEATS2Q9ULM3 1422 aa22.11■■□□□ 1.13
CLMAT3-201ENST00000510576 C14orf93Q9H972 538 aaKnown RBP22.11■■□□□ 1.13
CLMAT3-201ENST00000510576 CENPJQ9HC77 1338 aaPredicted RBP22.11■■□□□ 1.13
CLMAT3-201ENST00000510576 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
CLMAT3-201ENST00000510576 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLMAT3-201ENST00000510576 PREX1Q8TCU6 1659 aa22.06■■□□□ 1.12
CLMAT3-201ENST00000510576 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
CLMAT3-201ENST00000510576 RCAN3Q9UKA8 241 aa22.05■■□□□ 1.12
CLMAT3-201ENST00000510576 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
CLMAT3-201ENST00000510576 MYO5BQ9ULV0 1848 aa22.04■■□□□ 1.12
CLMAT3-201ENST00000510576 RRP1P56182 461 aaKnown RBP22.03■■□□□ 1.12
CLMAT3-201ENST00000510576 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
CLMAT3-201ENST00000510576 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
CLMAT3-201ENST00000510576 CDCA7LQ96GN5 454 aa22.01■■□□□ 1.11
CLMAT3-201ENST00000510576 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
CLMAT3-201ENST00000510576 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
CLMAT3-201ENST00000510576 CARD14Q9BXL6 1004 aa21.99■■□□□ 1.11
CLMAT3-201ENST00000510576 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
CLMAT3-201ENST00000510576 IDI1Q13907 227 aa21.98■■□□□ 1.11
CLMAT3-201ENST00000510576 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
CLMAT3-201ENST00000510576 ZFYVE9O95405 1425 aa21.97■■□□□ 1.11
CLMAT3-201ENST00000510576 NUTM2DQ5VT03 806 aaPredicted RBP21.96■■□□□ 1.11
CLMAT3-201ENST00000510576 REREQ9P2R6 1566 aa21.96■■□□□ 1.11
CLMAT3-201ENST00000510576 USP32Q8NFA0 1604 aa21.95■■□□□ 1.1
CLMAT3-201ENST00000510576 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
CLMAT3-201ENST00000510576 PLEKHH1Q9ULM0 1364 aa21.92■■□□□ 1.1
CLMAT3-201ENST00000510576 TULP4Q9NRJ4 1543 aa21.92■■□□□ 1.1
CLMAT3-201ENST00000510576 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
CLMAT3-201ENST00000510576 EVC2Q86UK5 1308 aa21.91■■□□□ 1.1
CLMAT3-201ENST00000510576 AGLP35573 1532 aa21.91■■□□□ 1.1
CLMAT3-201ENST00000510576 SLC12A5Q9H2X9 1139 aa21.89■■□□□ 1.09
CLMAT3-201ENST00000510576 EXOC6Q8TAG9 804 aa21.88■■□□□ 1.09
CLMAT3-201ENST00000510576 CLTCQ00610 1675 aaKnown RBP21.88■■□□□ 1.09
CLMAT3-201ENST00000510576 ZNF521Q96K83 1311 aa21.88■■□□□ 1.09
CLMAT3-201ENST00000510576 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
CLMAT3-201ENST00000510576 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
CLMAT3-201ENST00000510576 MYT1Q01538 1121 aa21.86■■□□□ 1.09
CLMAT3-201ENST00000510576 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
CLMAT3-201ENST00000510576 MORC1Q86VD1 984 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms