RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 CFAP70Q5T0N1 1121 aa22.28■■□□□ 1.16
CLDND1-222ENST00000510545 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
CLDND1-222ENST00000510545 PIK3C2BO00750 1634 aa22.28■■□□□ 1.16
CLDND1-222ENST00000510545 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
CLDND1-222ENST00000510545 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.15
CLDND1-222ENST00000510545 AGLP35573 1532 aa22.26■■□□□ 1.15
CLDND1-222ENST00000510545 CNGB1Q14028 1251 aaPredicted RBP22.24■■□□□ 1.15
CLDND1-222ENST00000510545 PPLO60437 1756 aa22.23■■□□□ 1.15
CLDND1-222ENST00000510545 IDI1Q13907 227 aa22.22■■□□□ 1.15
CLDND1-222ENST00000510545 ARHGEF40Q8TER5 1519 aa22.21■■□□□ 1.15
CLDND1-222ENST00000510545 TMF1P82094 1093 aa22.21■■□□□ 1.15
CLDND1-222ENST00000510545 PREX1Q8TCU6 1659 aa22.21■■□□□ 1.15
CLDND1-222ENST00000510545 FBXO31Q5XUX0 539 aaPredicted RBP22.2■■□□□ 1.14
CLDND1-222ENST00000510545 RPGRIP1LQ68CZ1 1315 aa22.19■■□□□ 1.14
CLDND1-222ENST00000510545 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
CLDND1-222ENST00000510545 PIK3C2GO75747 1445 aa22.19■■□□□ 1.14
CLDND1-222ENST00000510545 MLECQ14165 292 aa22.17■■□□□ 1.14
CLDND1-222ENST00000510545 SLC52A1Q9NWF4 448 aa22.17■■□□□ 1.14
CLDND1-222ENST00000510545 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
CLDND1-222ENST00000510545 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
CLDND1-222ENST00000510545 PER1O15534 1290 aaPredicted RBP22.15■■□□□ 1.14
CLDND1-222ENST00000510545 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
CLDND1-222ENST00000510545 PPP6R1Q9UPN7 881 aa22.15■■□□□ 1.14
CLDND1-222ENST00000510545 CLTCQ00610 1675 aaKnown RBP22.15■■□□□ 1.14
CLDND1-222ENST00000510545 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
CLDND1-222ENST00000510545 EIF3AQ14152 1382 aaKnown RBP22.14■■□□□ 1.13
CLDND1-222ENST00000510545 SETBP1Q9Y6X0 1596 aa22.12■■□□□ 1.13
CLDND1-222ENST00000510545 MYO5BQ9ULV0 1848 aa22.12■■□□□ 1.13
CLDND1-222ENST00000510545 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
CLDND1-222ENST00000510545 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
CLDND1-222ENST00000510545 PANK3Q9H999 370 aa22.11■■□□□ 1.13
CLDND1-222ENST00000510545 ADGRB1O14514 1584 aa22.11■■□□□ 1.13
CLDND1-222ENST00000510545 HNRNPUQ00839 825 aaKnown RBP eCLIP22.1■■□□□ 1.13
CLDND1-222ENST00000510545 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
CLDND1-222ENST00000510545 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
CLDND1-222ENST00000510545 RALBP1Q15311 655 aa22.06■■□□□ 1.12
CLDND1-222ENST00000510545 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
CLDND1-222ENST00000510545 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
CLDND1-222ENST00000510545 ZFYVE9O95405 1425 aa22.05■■□□□ 1.12
CLDND1-222ENST00000510545 SPATA31D1Q6ZQQ2 1576 aa22.05■■□□□ 1.12
CLDND1-222ENST00000510545 CDCA8Q53HL2 280 aa22.04■■□□□ 1.12
CLDND1-222ENST00000510545 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
CLDND1-222ENST00000510545 PARD3Q8TEW0 1356 aa22.04■■□□□ 1.12
CLDND1-222ENST00000510545 MYBBP1AQ9BQG0 1328 aaKnown RBP22.03■■□□□ 1.12
CLDND1-222ENST00000510545 CENPJQ9HC77 1338 aaPredicted RBP22.02■■□□□ 1.12
CLDND1-222ENST00000510545 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
CLDND1-222ENST00000510545 MYOM1P52179 1685 aa22.01■■□□□ 1.11
CLDND1-222ENST00000510545 SBNO2Q9Y2G9 1366 aa22.01■■□□□ 1.11
CLDND1-222ENST00000510545 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
CLDND1-222ENST00000510545 ZMYM3Q14202 1370 aa22■■□□□ 1.11
CLDND1-222ENST00000510545 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
CLDND1-222ENST00000510545 KDM5AP29375 1690 aaKnown RBP22■■□□□ 1.11
CLDND1-222ENST00000510545 TMC1Q8TDI8 760 aa21.98■■□□□ 1.11
CLDND1-222ENST00000510545 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
CLDND1-222ENST00000510545 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
CLDND1-222ENST00000510545 STAG3Q9UJ98 1225 aa21.97■■□□□ 1.11
CLDND1-222ENST00000510545 BRD4O60885 1362 aaPredicted RBP21.97■■□□□ 1.11
CLDND1-222ENST00000510545 A2ML1A8K2U0 1454 aa21.97■■□□□ 1.11
CLDND1-222ENST00000510545 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
CLDND1-222ENST00000510545 ESF1Q9H501 851 aaKnown RBP21.97■■□□□ 1.11
CLDND1-222ENST00000510545 QRICH2Q9H0J4 1663 aa21.95■■□□□ 1.11
CLDND1-222ENST00000510545 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.11
CLDND1-222ENST00000510545 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
CLDND1-222ENST00000510545 ARHGEF28Q8N1W1 1705 aaKnown RBP21.93■■□□□ 1.1
CLDND1-222ENST00000510545 AMER1Q5JTC6 1135 aaPredicted RBP21.93■■□□□ 1.1
CLDND1-222ENST00000510545 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
CLDND1-222ENST00000510545 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
CLDND1-222ENST00000510545 LRPPRCP42704 1394 aaKnown RBP21.9■■□□□ 1.1
CLDND1-222ENST00000510545 STK26Q9P289 416 aa21.89■■□□□ 1.1
CLDND1-222ENST00000510545 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.1
CLDND1-222ENST00000510545 ALKQ9UM73 1620 aa21.89■■□□□ 1.09
CLDND1-222ENST00000510545 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
CLDND1-222ENST00000510545 CARD14Q9BXL6 1004 aa21.87■■□□□ 1.09
CLDND1-222ENST00000510545 TNRQ92752 1358 aa21.87■■□□□ 1.09
CLDND1-222ENST00000510545 SAFB2Q14151 953 aaKnown RBP eCLIP21.85■■□□□ 1.09
CLDND1-222ENST00000510545 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
CLDND1-222ENST00000510545 YTHDC2Q9H6S0 1430 aaKnown RBP21.85■■□□□ 1.09
CLDND1-222ENST00000510545 PTPRMP28827 1452 aa21.85■■□□□ 1.09
CLDND1-222ENST00000510545 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
CLDND1-222ENST00000510545 SLC12A5Q9H2X9 1139 aa21.83■■□□□ 1.08
CLDND1-222ENST00000510545 NPC1L1Q9UHC9 1359 aa21.83■■□□□ 1.08
CLDND1-222ENST00000510545 CEBPAP49715 358 aaPredicted RBP21.82■■□□□ 1.08
CLDND1-222ENST00000510545 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
CLDND1-222ENST00000510545 EVC2Q86UK5 1308 aa21.81■■□□□ 1.08
CLDND1-222ENST00000510545 PRAM1Q96QH2 718 aa21.8■■□□□ 1.08
CLDND1-222ENST00000510545 SETD1AO15047 1707 aaKnown RBP21.8■■□□□ 1.08
CLDND1-222ENST00000510545 NRXN3Q9Y4C0 1643 aa21.78■■□□□ 1.08
CLDND1-222ENST00000510545 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
CLDND1-222ENST00000510545 FKBP8Q14318 412 aa21.77■■□□□ 1.08
CLDND1-222ENST00000510545 PUS7Q96PZ0 661 aaKnown RBP21.77■■□□□ 1.08
CLDND1-222ENST00000510545 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.07
CLDND1-222ENST00000510545 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLDND1-222ENST00000510545 MINK1Q8N4C8 1332 aaPredicted RBP21.75■■□□□ 1.07
CLDND1-222ENST00000510545 POGKQ9P215 609 aa21.75■■□□□ 1.07
CLDND1-222ENST00000510545 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
CLDND1-222ENST00000510545 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
CLDND1-222ENST00000510545 C3P01024 1663 aa21.74■■□□□ 1.07
CLDND1-222ENST00000510545 METP08581 1390 aa21.73■■□□□ 1.07
CLDND1-222ENST00000510545 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
CLDND1-222ENST00000510545 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms