RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
NEK1-206ENST00000510533 G3V3G9 751 aa12.96□□□□□ -0.33
NEK1-206ENST00000510533 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
NEK1-206ENST00000510533 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.34
NEK1-206ENST00000510533 CPLX2Q6PUV4 134 aaKnown RBP12.95□□□□□ -0.34
NEK1-206ENST00000510533 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
NEK1-206ENST00000510533 TPM2P07951 284 aa12.95□□□□□ -0.34
NEK1-206ENST00000510533 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
NEK1-206ENST00000510533 SYNE3Q6ZMZ3 975 aa12.95□□□□□ -0.34
NEK1-206ENST00000510533 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
NEK1-206ENST00000510533 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
NEK1-206ENST00000510533 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
NEK1-206ENST00000510533 SETQ01105 290 aaPredicted RBP12.94□□□□□ -0.34
NEK1-206ENST00000510533 CCDC70Q6NSX1 233 aa12.94□□□□□ -0.34
NEK1-206ENST00000510533 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
NEK1-206ENST00000510533 TEFQ10587 303 aa12.94□□□□□ -0.34
NEK1-206ENST00000510533 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
NEK1-206ENST00000510533 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
NEK1-206ENST00000510533 ROCK1Q13464 1354 aa12.93□□□□□ -0.34
NEK1-206ENST00000510533 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
NEK1-206ENST00000510533 RIPK4P57078 832 aa12.93□□□□□ -0.34
NEK1-206ENST00000510533 NUCB2P80303 420 aa12.93□□□□□ -0.34
NEK1-206ENST00000510533 TRIM29Q14134 588 aa12.92□□□□□ -0.34
NEK1-206ENST00000510533 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
NEK1-206ENST00000510533 ZNF771Q7L3S4 317 aaPredicted RBP12.92□□□□□ -0.34
NEK1-206ENST00000510533 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
NEK1-206ENST00000510533 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
NEK1-206ENST00000510533 WIZO95785 1651 aa12.92□□□□□ -0.34
NEK1-206ENST00000510533 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
NEK1-206ENST00000510533 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
NEK1-206ENST00000510533 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
NEK1-206ENST00000510533 EIF2S2P20042 333 aaKnown RBP12.91□□□□□ -0.34
NEK1-206ENST00000510533 RNF20Q5VTR2 975 aa12.91□□□□□ -0.34
NEK1-206ENST00000510533 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
NEK1-206ENST00000510533 MINK1Q8N4C8 1332 aaPredicted RBP12.9□□□□□ -0.34
NEK1-206ENST00000510533 CPLX1O14810 134 aa12.9□□□□□ -0.34
NEK1-206ENST00000510533 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
NEK1-206ENST00000510533 IPO7O95373 1038 aaKnown RBP12.9□□□□□ -0.34
NEK1-206ENST00000510533 PRM3Q9NNZ6 103 aa12.9□□□□□ -0.34
NEK1-206ENST00000510533 FAM43AQ8N2R8 423 aa12.9□□□□□ -0.34
NEK1-206ENST00000510533 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
NEK1-206ENST00000510533 AAMPQ13685 434 aa12.89□□□□□ -0.35
NEK1-206ENST00000510533 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
NEK1-206ENST00000510533 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
NEK1-206ENST00000510533 CCDC7Q96M83 1385 aa12.89□□□□□ -0.35
NEK1-206ENST00000510533 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
NEK1-206ENST00000510533 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
NEK1-206ENST00000510533 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
NEK1-206ENST00000510533 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
NEK1-206ENST00000510533 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
NEK1-206ENST00000510533 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
NEK1-206ENST00000510533 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
NEK1-206ENST00000510533 CCDC47Q96A33 483 aaKnown RBP12.88□□□□□ -0.35
NEK1-206ENST00000510533 PCMTD1Q96MG8 357 aaPredicted RBP12.88□□□□□ -0.35
NEK1-206ENST00000510533 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
NEK1-206ENST00000510533 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
NEK1-206ENST00000510533 SASS6Q6UVJ0 657 aa12.87□□□□□ -0.35
NEK1-206ENST00000510533 G3BP1Q13283 466 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEK1-206ENST00000510533 GNAI1P63096 354 aa12.87□□□□□ -0.35
NEK1-206ENST00000510533 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
NEK1-206ENST00000510533 DDX58O95786 925 aaKnown RBP12.86□□□□□ -0.35
NEK1-206ENST00000510533 CNTLNQ9NXG0 1405 aa12.86□□□□□ -0.35
NEK1-206ENST00000510533 TRDNQ13061 729 aa12.86□□□□□ -0.35
NEK1-206ENST00000510533 APPP05067 770 aa12.86□□□□□ -0.35
NEK1-206ENST00000510533 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
NEK1-206ENST00000510533 RUSC2Q8N2Y8 1516 aa12.86□□□□□ -0.35
NEK1-206ENST00000510533 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
NEK1-206ENST00000510533 MRE11P49959 708 aa12.85□□□□□ -0.35
NEK1-206ENST00000510533 CCDC73Q6ZRK6 1079 aa12.84□□□□□ -0.35
NEK1-206ENST00000510533 ERC2O15083 957 aa12.84□□□□□ -0.35
NEK1-206ENST00000510533 CDC45O75419 566 aa12.84□□□□□ -0.35
NEK1-206ENST00000510533 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
NEK1-206ENST00000510533 NOL10Q9BSC4 688 aaKnown RBP12.84□□□□□ -0.35
NEK1-206ENST00000510533 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
NEK1-206ENST00000510533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
NEK1-206ENST00000510533 NFXL1Q6ZNB6 911 aa12.83□□□□□ -0.36
NEK1-206ENST00000510533 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEK1-206ENST00000510533 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
NEK1-206ENST00000510533 ARGLU1Q9NWB6 273 aaPredicted RBP12.82□□□□□ -0.36
NEK1-206ENST00000510533 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
NEK1-206ENST00000510533 NASPP49321 788 aaPredicted RBP12.82□□□□□ -0.36
NEK1-206ENST00000510533 CCDC39Q9UFE4 941 aa12.82□□□□□ -0.36
NEK1-206ENST00000510533 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
NEK1-206ENST00000510533 MNS1Q8NEH6 495 aa12.81□□□□□ -0.36
NEK1-206ENST00000510533 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
NEK1-206ENST00000510533 STAC3Q96MF2 364 aa12.81□□□□□ -0.36
NEK1-206ENST00000510533 EVA1CP58658 441 aa12.81□□□□□ -0.36
NEK1-206ENST00000510533 PTPRGP23470 1445 aa12.81□□□□□ -0.36
NEK1-206ENST00000510533 ERICH2A1L162 156 aa12.8□□□□□ -0.36
NEK1-206ENST00000510533 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
NEK1-206ENST00000510533 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
NEK1-206ENST00000510533 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEK1-206ENST00000510533 FOSBP53539 338 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 HMOX1P09601 288 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 R3HCC1Q9Y3T6 440 aaKnown RBP12.79□□□□□ -0.36
NEK1-206ENST00000510533 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
NEK1-206ENST00000510533 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
NEK1-206ENST00000510533 RAD21O60216 631 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms