RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
PTPN20-224ENST00000510335 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
PTPN20-224ENST00000510335 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
PTPN20-224ENST00000510335 IQGAP3Q86VI3 1631 aa11.24□□□□□ -0.61
PTPN20-224ENST00000510335 ANP32AP39687 249 aaKnown RBP11.24□□□□□ -0.61
PTPN20-224ENST00000510335 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
PTPN20-224ENST00000510335 MS4A1P11836 297 aa11.23□□□□□ -0.61
PTPN20-224ENST00000510335 NUP155O75694 1391 aa11.22□□□□□ -0.61
PTPN20-224ENST00000510335 ATP10BO94823 1461 aa11.22□□□□□ -0.61
PTPN20-224ENST00000510335 CLASP1Q7Z460 1538 aa11.22□□□□□ -0.61
PTPN20-224ENST00000510335 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
PTPN20-224ENST00000510335 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
PTPN20-224ENST00000510335 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
PTPN20-224ENST00000510335 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
PTPN20-224ENST00000510335 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
PTPN20-224ENST00000510335 NLRP13Q86W25 1043 aa11.21□□□□□ -0.61
PTPN20-224ENST00000510335 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-224ENST00000510335 CARD11Q9BXL7 1154 aa11.2□□□□□ -0.62
PTPN20-224ENST00000510335 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-224ENST00000510335 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
PTPN20-224ENST00000510335 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
PTPN20-224ENST00000510335 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-224ENST00000510335 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
PTPN20-224ENST00000510335 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
PTPN20-224ENST00000510335 A2MP01023 1474 aa11.18□□□□□ -0.62
PTPN20-224ENST00000510335 DEKP35659 375 aaKnown RBP11.17□□□□□ -0.62
PTPN20-224ENST00000510335 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
PTPN20-224ENST00000510335 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
PTPN20-224ENST00000510335 CDC42BPBQ9Y5S2 1711 aa11.17□□□□□ -0.62
PTPN20-224ENST00000510335 CCDC144AA2RUR9 1427 aa11.17□□□□□ -0.62
PTPN20-224ENST00000510335 ERBINQ96RT1 1412 aa11.17□□□□□ -0.62
PTPN20-224ENST00000510335 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-224ENST00000510335 DUOX2Q9NRD8 1548 aa11.15□□□□□ -0.62
PTPN20-224ENST00000510335 PLA2R1Q13018 1463 aa11.15□□□□□ -0.62
PTPN20-224ENST00000510335 SYNMO15061 1565 aa11.15□□□□□ -0.62
PTPN20-224ENST00000510335 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.63
PTPN20-224ENST00000510335 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
PTPN20-224ENST00000510335 PLEKHD1A6NEE1 506 aa11.14□□□□□ -0.63
PTPN20-224ENST00000510335 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
PTPN20-224ENST00000510335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-224ENST00000510335 ST20-MTHFSA0A0A6YYL1 179 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 STK25O00506 426 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 PER1O15534 1290 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-224ENST00000510335 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-224ENST00000510335 TSPY4P0CV99 314 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 TSPY10P0CW01 314 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-224ENST00000510335 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 PCDHB13Q9Y5F0 798 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 NPC1L1Q9UHC9 1359 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
PTPN20-224ENST00000510335 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
PTPN20-224ENST00000510335 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
PTPN20-224ENST00000510335 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
PTPN20-224ENST00000510335 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
PTPN20-224ENST00000510335 ABCC2Q92887 1545 aa11.11□□□□□ -0.63
PTPN20-224ENST00000510335 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
PTPN20-224ENST00000510335 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
PTPN20-224ENST00000510335 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 ARAP3Q8WWN8 1544 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 KIAA1210Q9ULL0 1709 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
PTPN20-224ENST00000510335 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-224ENST00000510335 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-224ENST00000510335 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
PTPN20-224ENST00000510335 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
PTPN20-224ENST00000510335 TRPM2O94759 1503 aa11.09□□□□□ -0.63
PTPN20-224ENST00000510335 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
PTPN20-224ENST00000510335 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
PTPN20-224ENST00000510335 TESK2Q96S53 571 aa11.09□□□□□ -0.63
PTPN20-224ENST00000510335 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-224ENST00000510335 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
PTPN20-224ENST00000510335 SPHKAPQ2M3C7 1700 aa11.09□□□□□ -0.63
PTPN20-224ENST00000510335 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
PTPN20-224ENST00000510335 PPM1GO15355 546 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-224ENST00000510335 MAP3K13O43283 966 aa11.08□□□□□ -0.64
PTPN20-224ENST00000510335 CHMP7Q8WUX9 453 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-224ENST00000510335 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
PTPN20-224ENST00000510335 DDRGK1Q96HY6 314 aa11.08□□□□□ -0.64
PTPN20-224ENST00000510335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN20-224ENST00000510335 DISP3Q9P2K9 1392 aa11.07□□□□□ -0.64
PTPN20-224ENST00000510335 DEPDC5O75140 1603 aa11.07□□□□□ -0.64
PTPN20-224ENST00000510335 PDE4AP27815 886 aa11.07□□□□□ -0.64
PTPN20-224ENST00000510335 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
PTPN20-224ENST00000510335 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-224ENST00000510335 EXOC6Q8TAG9 804 aa11.07□□□□□ -0.64
PTPN20-224ENST00000510335 DCAF11Q8TEB1 546 aa11.07□□□□□ -0.64
PTPN20-224ENST00000510335 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
PTPN20-224ENST00000510335 ZNF777Q9ULD5 760 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-224ENST00000510335 ABCC1P33527 1531 aa11.06□□□□□ -0.64
PTPN20-224ENST00000510335 CEP152O94986 1710 aa11.06□□□□□ -0.64
PTPN20-224ENST00000510335 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
PTPN20-224ENST00000510335 ARHGAP5Q13017 1502 aa11.05□□□□□ -0.64
PTPN20-224ENST00000510335 MYOM1P52179 1685 aa11.05□□□□□ -0.64
PTPN20-224ENST00000510335 IFNL1Q8IU54 200 aa11.05□□□□□ -0.64
PTPN20-224ENST00000510335 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms